BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00012083
         (317 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267057.2| PREDICTED: pentatricopeptide repeat-containi...   172   3e-41
emb|CBI36299.3| unnamed protein product [Vitis vinifera]              172   3e-41
ref|XP_004152207.1| PREDICTED: pentatricopeptide repeat-containi...   171   6e-41
ref|XP_002517613.1| pentatricopeptide repeat-containing protein,...   169   3e-40
ref|XP_002303255.1| predicted protein [Populus trichocarpa] gi|2...   167   8e-40

>ref|XP_002267057.2| PREDICTED: pentatricopeptide repeat-containing protein At1g80150,
           mitochondrial-like [Vitis vinifera]
          Length = 405

 Score =  172 bits (436), Expect = 3e-41
 Identities = 82/105 (78%), Positives = 95/105 (90%)
 Frame = -3

Query: 315 ALVKLKNERDPDKLFHLFQANSRNRLVIENRFAFEDTISRLAGARRFDYIQQLLDYQLSL 136
           ALVKLK ERDP++LF LF+AN+ NRLV+ENRFAFEDT+SRLAGA RFDYI+ LL++Q +L
Sbjct: 45  ALVKLKAERDPERLFQLFKANAHNRLVVENRFAFEDTVSRLAGAGRFDYIEHLLEHQKTL 104

Query: 135 PQGRREGFVVRIIMLYGKAGMVNQAVDTFYNMHLFRCSCTVKSFN 1
           PQGRREGF+VRIIMLYGKAGM+ QAVDTFY+MHLF C  TVKSFN
Sbjct: 105 PQGRREGFIVRIIMLYGKAGMIKQAVDTFYDMHLFGCQRTVKSFN 149


>emb|CBI36299.3| unnamed protein product [Vitis vinifera]
          Length = 353

 Score =  172 bits (436), Expect = 3e-41
 Identities = 82/105 (78%), Positives = 95/105 (90%)
 Frame = -3

Query: 315 ALVKLKNERDPDKLFHLFQANSRNRLVIENRFAFEDTISRLAGARRFDYIQQLLDYQLSL 136
           ALVKLK ERDP++LF LF+AN+ NRLV+ENRFAFEDT+SRLAGA RFDYI+ LL++Q +L
Sbjct: 45  ALVKLKAERDPERLFQLFKANAHNRLVVENRFAFEDTVSRLAGAGRFDYIEHLLEHQKTL 104

Query: 135 PQGRREGFVVRIIMLYGKAGMVNQAVDTFYNMHLFRCSCTVKSFN 1
           PQGRREGF+VRIIMLYGKAGM+ QAVDTFY+MHLF C  TVKSFN
Sbjct: 105 PQGRREGFIVRIIMLYGKAGMIKQAVDTFYDMHLFGCQRTVKSFN 149


>ref|XP_004152207.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80150,
           mitochondrial-like [Cucumis sativus]
           gi|449484169|ref|XP_004156805.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g80150,
           mitochondrial-like [Cucumis sativus]
          Length = 399

 Score =  171 bits (433), Expect = 6e-41
 Identities = 81/105 (77%), Positives = 95/105 (90%)
 Frame = -3

Query: 315 ALVKLKNERDPDKLFHLFQANSRNRLVIENRFAFEDTISRLAGARRFDYIQQLLDYQLSL 136
           ALVKLK ERDP+KLFHLF+AN+ NRLVIENRFAFEDT+SRLAGARRFDYI+ LL++Q +L
Sbjct: 40  ALVKLKAERDPEKLFHLFKANAHNRLVIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTL 99

Query: 135 PQGRREGFVVRIIMLYGKAGMVNQAVDTFYNMHLFRCSCTVKSFN 1
           PQGRREGF++RIIMLYGKA M+  A+DTFY+MHL+ C  TVKSFN
Sbjct: 100 PQGRREGFIIRIIMLYGKAEMIKHALDTFYDMHLYGCLRTVKSFN 144


>ref|XP_002517613.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223543245|gb|EEF44777.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 400

 Score =  169 bits (427), Expect = 3e-40
 Identities = 81/105 (77%), Positives = 94/105 (89%)
 Frame = -3

Query: 315 ALVKLKNERDPDKLFHLFQANSRNRLVIENRFAFEDTISRLAGARRFDYIQQLLDYQLSL 136
           AL KLK ERDP+KLF+LF+AN+RNRLVIENRFAFEDTISRLAGARRFDYI+ LL++Q +L
Sbjct: 41  ALAKLKAERDPEKLFNLFKANARNRLVIENRFAFEDTISRLAGARRFDYIEHLLEHQKTL 100

Query: 135 PQGRREGFVVRIIMLYGKAGMVNQAVDTFYNMHLFRCSCTVKSFN 1
           PQGRREGF++RIIMLYGKAGM   AVDTF +MH++ C  TVKSFN
Sbjct: 101 PQGRREGFIIRIIMLYGKAGMTKHAVDTFNDMHMYGCKRTVKSFN 145


>ref|XP_002303255.1| predicted protein [Populus trichocarpa] gi|222840687|gb|EEE78234.1|
           predicted protein [Populus trichocarpa]
          Length = 401

 Score =  167 bits (423), Expect = 8e-40
 Identities = 80/105 (76%), Positives = 92/105 (87%)
 Frame = -3

Query: 315 ALVKLKNERDPDKLFHLFQANSRNRLVIENRFAFEDTISRLAGARRFDYIQQLLDYQLSL 136
           ALVKLK ERDP+KLF+LF+AN+ NRLV+ENRFAFEDT+SRLAGA RFDYI+ LL++Q  L
Sbjct: 42  ALVKLKAERDPEKLFNLFKANAENRLVVENRFAFEDTVSRLAGANRFDYIEHLLEHQKPL 101

Query: 135 PQGRREGFVVRIIMLYGKAGMVNQAVDTFYNMHLFRCSCTVKSFN 1
           PQGRREGF+VRIIMLYGKAGM+  A+DTFYNMHL  C  TVKS N
Sbjct: 102 PQGRREGFMVRIIMLYGKAGMIKHAIDTFYNMHLHGCKRTVKSVN 146