BLASTX nr result
ID: Coptis24_contig00012073
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00012073
(1407 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002315112.1| predicted protein [Populus trichocarpa] gi|2... 70 1e-28
gb|AEY85029.1| cohesin subunit [Camellia sinensis] 105 3e-20
ref|XP_002265684.2| PREDICTED: uncharacterized protein LOC100263... 105 3e-20
emb|CBI23350.3| unnamed protein product [Vitis vinifera] 105 3e-20
ref|XP_002514774.1| cohesin subunit rad21, putative [Ricinus com... 100 9e-19
>ref|XP_002315112.1| predicted protein [Populus trichocarpa] gi|222864152|gb|EEF01283.1|
predicted protein [Populus trichocarpa]
Length = 1065
Score = 70.5 bits (171), Expect(3) = 1e-28
Identities = 35/54 (64%), Positives = 43/54 (79%), Gaps = 3/54 (5%)
Frame = -1
Query: 939 TIRQQLTSTEDIRRLRKKAPCTRPEIWLIQKHLLEDELFNEPLFT---SNLVCL 787
TIRQQLT+TEDIRRLRKKAPCTR EI IQ+ L++E+F+EP+ T + L CL
Sbjct: 581 TIRQQLTNTEDIRRLRKKAPCTRTEILTIQRQSLDEEIFSEPVLTGMSAELTCL 634
Score = 53.5 bits (127), Expect(3) = 1e-28
Identities = 25/42 (59%), Positives = 32/42 (76%)
Frame = -2
Query: 1070 SSALKLRPTPPPTEIASRKQPRITPRASVVKRKVLLDDTMVL 945
SS LK++PTPP E+AS K+ R R S +KRKVL+DD+MVL
Sbjct: 536 SSVLKMKPTPPAPEVASMKRARSVSRPSAMKRKVLMDDSMVL 577
Score = 50.8 bits (120), Expect(3) = 1e-28
Identities = 30/79 (37%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Frame = -1
Query: 1365 SFSLPVPEPEMLLSVPASVPDAQNDLLAQFTPEKEVSEEG--GNGLKNPSGQKRQLMESA 1192
S + +P PE LLSVP + D NDLL + TP+KE+ + G + N +G+KR E++
Sbjct: 437 SLTAELPTPEKLLSVPQELLDKPNDLLVESTPDKEMVDGGDRSSAGTNITGKKRSFTENS 496
Query: 1191 LVQRYGSSTILSGIPHSKR 1135
L + +S G+ SKR
Sbjct: 497 LTVQSLNSIDSFGVSRSKR 515
>gb|AEY85029.1| cohesin subunit [Camellia sinensis]
Length = 1336
Score = 105 bits (262), Expect = 3e-20
Identities = 78/201 (38%), Positives = 102/201 (50%), Gaps = 7/201 (3%)
Frame = -1
Query: 1386 QQSDTVASFSLPVPEPEMLLSVPASVPDAQNDLLAQFTPEKE---VSEEGGNGLKNPSGQ 1216
++ D A+ LPVPE LLSVP + D Q++LL + TP+K +E G+ N +G+
Sbjct: 646 EKLDDSANSELPVPEK--LLSVPEGLADLQDNLLMESTPDKTHLATGDESDAGINNIAGK 703
Query: 1215 KRQLMESALVQRYGSSTILSGIPHSKRXXXXXXXXXXXXXXXXVGIKLIFGSKIKAYSTA 1036
KR ES + + +S G+ HSKR VG + S +K T
Sbjct: 704 KRSFTESTMTLQSLNSVESLGMVHSKRTKESVPDDNDLLSSILVGRR---SSVLKMKPTP 760
Query: 1035 N*NSI*KTTEDNTTS*CG*KE----GSSR*YHGPACTIRQQLTSTEDIRRLRKKAPCTRP 868
T K + HG IRQQLTSTEDIRR+RKKAPCT P
Sbjct: 761 PPAMTCMKRPRITPRVYASKRKLLMDDTMVLHGDV--IRQQLTSTEDIRRIRKKAPCTHP 818
Query: 867 EIWLIQKHLLEDELFNEPLFT 805
EIW+IQK LEDE+F+EP+FT
Sbjct: 819 EIWMIQKGFLEDEIFSEPIFT 839
>ref|XP_002265684.2| PREDICTED: uncharacterized protein LOC100263480 [Vitis vinifera]
Length = 1335
Score = 105 bits (262), Expect = 3e-20
Identities = 76/194 (39%), Positives = 97/194 (50%), Gaps = 6/194 (3%)
Frame = -1
Query: 1368 ASFSLPVPEPEMLLSVPASVPDAQNDLLAQFTPEK--EVSEEGGNGLKNPSGQKRQLMES 1195
+S + +P PE LLS+P + D ND L + TP+K E SE G +KN SG+KR ES
Sbjct: 650 SSTNSDLPAPEKLLSMPEGLVDPPNDFLVELTPDKVLEGSEGDGAAMKNISGKKRSFTES 709
Query: 1194 ALVQRYGSSTILSGIPHSKRXXXXXXXXXXXXXXXXVGIKLIFGSKIKAYSTAN*NSI*K 1015
L +S G+ S++ VG + S +K T +
Sbjct: 710 TLTLHSLNSVETFGVSKSRKTAESIPDDDDLLSSILVGRR---SSALKMKPTPPPEVVSM 766
Query: 1014 TTEDNTTS*CG*KE----GSSR*YHGPACTIRQQLTSTEDIRRLRKKAPCTRPEIWLIQK 847
T K HG TIRQQLTSTEDIRR+RKKAPCTR EIW+IQK
Sbjct: 767 KRPRTATRSNASKRKVLMDDPMVLHGD--TIRQQLTSTEDIRRVRKKAPCTRLEIWMIQK 824
Query: 846 HLLEDELFNEPLFT 805
LEDE+F+EP+ T
Sbjct: 825 QFLEDEIFSEPIST 838
>emb|CBI23350.3| unnamed protein product [Vitis vinifera]
Length = 1133
Score = 105 bits (262), Expect = 3e-20
Identities = 76/194 (39%), Positives = 97/194 (50%), Gaps = 6/194 (3%)
Frame = -1
Query: 1368 ASFSLPVPEPEMLLSVPASVPDAQNDLLAQFTPEK--EVSEEGGNGLKNPSGQKRQLMES 1195
+S + +P PE LLS+P + D ND L + TP+K E SE G +KN SG+KR ES
Sbjct: 549 SSTNSDLPAPEKLLSMPEGLVDPPNDFLVELTPDKVLEGSEGDGAAMKNISGKKRSFTES 608
Query: 1194 ALVQRYGSSTILSGIPHSKRXXXXXXXXXXXXXXXXVGIKLIFGSKIKAYSTAN*NSI*K 1015
L +S G+ S++ VG + S +K T +
Sbjct: 609 TLTLHSLNSVETFGVSKSRKTAESIPDDDDLLSSILVGRR---SSALKMKPTPPPEVVSM 665
Query: 1014 TTEDNTTS*CG*KE----GSSR*YHGPACTIRQQLTSTEDIRRLRKKAPCTRPEIWLIQK 847
T K HG TIRQQLTSTEDIRR+RKKAPCTR EIW+IQK
Sbjct: 666 KRPRTATRSNASKRKVLMDDPMVLHGD--TIRQQLTSTEDIRRVRKKAPCTRLEIWMIQK 723
Query: 846 HLLEDELFNEPLFT 805
LEDE+F+EP+ T
Sbjct: 724 QFLEDEIFSEPIST 737
>ref|XP_002514774.1| cohesin subunit rad21, putative [Ricinus communis]
gi|223545825|gb|EEF47328.1| cohesin subunit rad21,
putative [Ricinus communis]
Length = 1247
Score = 100 bits (249), Expect = 9e-19
Identities = 78/209 (37%), Positives = 106/209 (50%), Gaps = 8/209 (3%)
Frame = -1
Query: 1407 SNVEKLGQQSDTVASFSLPVPEPEMLLSVPASVPDAQNDLLAQFTPEKEVSEEG---GNG 1237
+ + Q + + + +P PE LLS+P ++ D +DLL + TP+KEV EEG G G
Sbjct: 560 NEISNNNQNENLTSPTTTELPAPEKLLSIPQTLLDKPHDLLVE-TPDKEVQEEGDGSGAG 618
Query: 1236 LKNPSGQKRQLMESALVQRYGSSTILSGIPHSKRXXXXXXXXXXXXXXXXVGIKLIFGSK 1057
++ +G+KR ESAL + +S G+ SKR VG K S
Sbjct: 619 IRI-TGKKRSFAESALTVQSLNSVESFGVTRSKRTVESIPDDDDLLSSILVGRK---SSA 674
Query: 1056 IKAYSTAN*NSI*KTTEDNTTS*CG*KE-----GSSR*YHGPACTIRQQLTSTEDIRRLR 892
+K T + TS + S HG IRQQLT+TEDIRRLR
Sbjct: 675 LKMKPTPPAPEVPSMKRARFTSRPSALKRKVLMDDSMVLHGDI--IRQQLTNTEDIRRLR 732
Query: 891 KKAPCTRPEIWLIQKHLLEDELFNEPLFT 805
KKAPCTR EI +IQ+ LEDE+F+EP+ T
Sbjct: 733 KKAPCTRTEILMIQRQFLEDEIFSEPVLT 761