BLASTX nr result

ID: Coptis24_contig00012051 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00012051
         (838 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284547.1| PREDICTED: carnitinyl-CoA dehydratase-like [...   271   2e-70
ref|XP_002284541.1| PREDICTED: carnitinyl-CoA dehydratase-like [...   266   6e-69
emb|CAN82902.1| hypothetical protein VITISV_036844 [Vitis vinifera]   259   4e-67
ref|XP_004134080.1| PREDICTED: carnitinyl-CoA dehydratase-like [...   252   6e-65
ref|XP_004134079.1| PREDICTED: fatty acid oxidation complex subu...   246   4e-63

>ref|XP_002284547.1| PREDICTED: carnitinyl-CoA dehydratase-like [Vitis vinifera]
          Length = 238

 Score =  271 bits (692), Expect = 2e-70
 Identities = 134/236 (56%), Positives = 171/236 (72%), Gaps = 1/236 (0%)
 Frame = +3

Query: 30  TLETRGNIFLLTLTGETEHRLSPSVISHLRSLLSQIRSEAKPGSVLITTAQGKFFSNGFD 209
           TLE RGN+F LTLTG+ EHRL PS+   +RS L+Q++S+A PGS LITTAQGKFFSNG D
Sbjct: 3   TLEQRGNLFFLTLTGDNEHRLGPSLFDSIRSALAQVKSQATPGSALITTAQGKFFSNGLD 62

Query: 210 LTWAQSNGPSFFRDRLHQMVIDFKPVISDLISLPLPTIXXXXXXXXXXGFLLAIGHDYVY 389
           L WAQ+ G S FRDRL  ++  FKP+++DL+SLP+PTI          GF+LAI HDYV 
Sbjct: 63  LAWAQAAGSSSFRDRLSHLLDCFKPIVADLLSLPMPTIAAVSGHAAAAGFMLAISHDYVL 122

Query: 390 MRKDRGVLYMSELDIGMTLPDYFMAFMREKIG-VKSLRDVVLQGKRIKGEDGVKMGIIDE 566
           M+ DR VLYMSELDIG+T PDYFMA M+ KI    + RDV+L+ K++K E+ V+MGI+D 
Sbjct: 123 MKNDRSVLYMSELDIGLTFPDYFMAMMKSKISDPAARRDVMLRAKKVKAEEAVRMGIVDS 182

Query: 567 VFCNAEETIEAAFKLGDKLGSRKWNGEVYLEIRKSTLKGVLPVLGLVEKEVLVARL 734
              +AE T+EAA +L ++L  RKWNGEVY EIRK+    V  +LGL  + V+  RL
Sbjct: 183 AHDSAESTVEAAVRLAEQLSGRKWNGEVYAEIRKAMHPEVCGLLGLSHRAVVAPRL 238


>ref|XP_002284541.1| PREDICTED: carnitinyl-CoA dehydratase-like [Vitis vinifera]
          Length = 238

 Score =  266 bits (679), Expect = 6e-69
 Identities = 131/236 (55%), Positives = 172/236 (72%), Gaps = 1/236 (0%)
 Frame = +3

Query: 30  TLETRGNIFLLTLTGETEHRLSPSVISHLRSLLSQIRSEAKPGSVLITTAQGKFFSNGFD 209
           TLE RGN+FLL LTG+ EHRL P+++  +RS L+Q++S+A PGS LITTA GKFFSNG D
Sbjct: 3   TLEQRGNLFLLILTGDNEHRLGPTLVDSIRSALAQVKSQATPGSALITTAHGKFFSNGLD 62

Query: 210 LTWAQSNGPSFFRDRLHQMVIDFKPVISDLISLPLPTIXXXXXXXXXXGFLLAIGHDYVY 389
           L WAQ+ G S FRDRL+ +V +FKP+I+DL+SLP+PTI          GF+LAI HDYV 
Sbjct: 63  LPWAQAAGSSGFRDRLNHLVNNFKPIIADLLSLPMPTIAAVSGHAAAAGFMLAISHDYVL 122

Query: 390 MRKDRGVLYMSELDIGMTLPDYFMAFMREKIG-VKSLRDVVLQGKRIKGEDGVKMGIIDE 566
           M+ DR VLYMSELDIG+T  DYFMA ++ +I    + RDV+L+ K++K E+ V+MGI+D 
Sbjct: 123 MKNDRSVLYMSELDIGLTFADYFMAMLKSRISDPAARRDVMLRAKKVKAEEAVRMGIVDS 182

Query: 567 VFCNAEETIEAAFKLGDKLGSRKWNGEVYLEIRKSTLKGVLPVLGLVEKEVLVARL 734
              +AE T+EAA +L ++L  RKWNGEVY EIRK+    V  +LGL  + V+  RL
Sbjct: 183 AHDSAESTVEAAVRLAEQLSGRKWNGEVYAEIRKAMHPEVCGLLGLSHRAVVAPRL 238


>emb|CAN82902.1| hypothetical protein VITISV_036844 [Vitis vinifera]
          Length = 238

 Score =  259 bits (663), Expect = 4e-67
 Identities = 129/232 (55%), Positives = 168/232 (72%), Gaps = 1/232 (0%)
 Frame = +3

Query: 30  TLETRGNIFLLTLTGETEHRLSPSVISHLRSLLSQIRSEAKPGSVLITTAQGKFFSNGFD 209
           TLE RGN+FLL LTG+ EHRL P+++  +RS L+Q++S+A PGS LITTA  KFFSNG D
Sbjct: 3   TLEERGNLFLLILTGDNEHRLGPTLVDSIRSALAQVKSQATPGSALITTAHDKFFSNGLD 62

Query: 210 LTWAQSNGPSFFRDRLHQMVIDFKPVISDLISLPLPTIXXXXXXXXXXGFLLAIGHDYVY 389
           L WAQ+ G S FRDRL+ +V +FKP+I+DL+SLP+PTI          GF LAI HDYV 
Sbjct: 63  LPWAQAAGSSGFRDRLNHLVNNFKPIIADLLSLPMPTIAAVSGHAAAAGFRLAISHDYVL 122

Query: 390 MRKDRGVLYMSELDIGMTLPDYFMAFMREKIG-VKSLRDVVLQGKRIKGEDGVKMGIIDE 566
           M+ DR VLYMSELDIG+T  DYFMA ++ KI    + RDV+L+ K++K E+ V+MGI+D 
Sbjct: 123 MKNDRSVLYMSELDIGLTFADYFMAMLKSKISDPAARRDVMLRAKKVKAEEAVRMGIVDS 182

Query: 567 VFCNAEETIEAAFKLGDKLGSRKWNGEVYLEIRKSTLKGVLPVLGLVEKEVL 722
              +AE T+EAA +L ++L  RKWNGEVY EIRK+    V  +LGL  + V+
Sbjct: 183 THDSAESTVEAAVRLAEQLSGRKWNGEVYAEIRKAMHPEVCGLLGLSHRAVV 234


>ref|XP_004134080.1| PREDICTED: carnitinyl-CoA dehydratase-like [Cucumis sativus]
           gi|449523557|ref|XP_004168790.1| PREDICTED:
           carnitinyl-CoA dehydratase-like [Cucumis sativus]
          Length = 239

 Score =  252 bits (644), Expect = 6e-65
 Identities = 128/237 (54%), Positives = 169/237 (71%), Gaps = 2/237 (0%)
 Frame = +3

Query: 30  TLETRGNIFLLTLTGETEHRLSPSVISHLRSLLSQIRSEAKPGSVLITTAQGKFFSNGFD 209
           TLE R N+F+LTLTG  +HR SPSVI+ +   LS+++S+A  GSVLITT+ GKFFSNGFD
Sbjct: 3   TLEKRRNLFILTLTGHDDHRFSPSVIAAILEALSKVKSQASTGSVLITTSHGKFFSNGFD 62

Query: 210 LTWAQSNGP-SFFRDRLHQMVIDFKPVISDLISLPLPTIXXXXXXXXXXGFLLAIGHDYV 386
           L+WAQ+ G  S   +RLH MV  FKPV+++L+SLP+PTI          GFLLA+ HDY+
Sbjct: 63  LSWAQAAGSVSAAAERLHHMVQIFKPVVAELLSLPMPTIAAISGHAAAAGFLLALSHDYL 122

Query: 387 YMRKDRGVLYMSELDIGMTLPDYFMAFMREKIGVKSL-RDVVLQGKRIKGEDGVKMGIID 563
            MR DRGVLYMSE+D+G++LPDYF A  + KI   S+ RDV+++G ++KGE  VKMGI D
Sbjct: 123 LMRSDRGVLYMSEVDLGLSLPDYFAALFKSKIASSSVRRDVLMRGMKVKGEAAVKMGIAD 182

Query: 564 EVFCNAEETIEAAFKLGDKLGSRKWNGEVYLEIRKSTLKGVLPVLGLVEKEVLVARL 734
                    +EAA +LG++LG RKWNGE Y EIRKS    +  +LGL EK + +++L
Sbjct: 183 SAHDGENGVMEAAVRLGEQLGERKWNGEPYAEIRKSLYPEISRLLGLPEKAISISKL 239


>ref|XP_004134079.1| PREDICTED: fatty acid oxidation complex subunit alpha-like [Cucumis
           sativus]
          Length = 239

 Score =  246 bits (629), Expect = 4e-63
 Identities = 123/237 (51%), Positives = 167/237 (70%), Gaps = 2/237 (0%)
 Frame = +3

Query: 30  TLETRGNIFLLTLTGETEHRLSPSVISHLRSLLSQIRSEAKPGSVLITTAQGKFFSNGFD 209
           T+E RGN F+LTLTG+ +HRLSPS+I+ +   LSQ++++A P SVLITT+ GKFFSNGFD
Sbjct: 3   TVEKRGNFFILTLTGDDDHRLSPSLINSILKALSQVKAQASPASVLITTSHGKFFSNGFD 62

Query: 210 LTWAQSNGP-SFFRDRLHQMVIDFKPVISDLISLPLPTIXXXXXXXXXXGFLLAIGHDYV 386
           L WA S G  S  R RL+ ++  FK V+++LISLP+PTI          GF LA+ HDY+
Sbjct: 63  LPWALSAGSVSAARHRLNHLIEIFKSVVAELISLPMPTIAAITGHAAAAGFTLALSHDYL 122

Query: 387 YMRKDRGVLYMSELDIGMTLPDYFMAFMREKIGVK-SLRDVVLQGKRIKGEDGVKMGIID 563
            MR DRGVLYM ELD+G+TLPDYFMA  + KIG   ++RD++L+G +++GE  V+MGI+D
Sbjct: 123 IMRSDRGVLYMRELDLGLTLPDYFMALFKSKIGSSLAMRDLILRGMKVRGEAAVRMGIVD 182

Query: 564 EVFCNAEETIEAAFKLGDKLGSRKWNGEVYLEIRKSTLKGVLPVLGLVEKEVLVARL 734
                 +  + AA +LG++L  R W+GEVY EIRKS    V  VLGL  K + +++L
Sbjct: 183 SAHDGEDSVVNAAVRLGEQLAGRNWDGEVYAEIRKSLYPEVSEVLGLPGKPISISKL 239


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