BLASTX nr result

ID: Coptis24_contig00012044 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00012044
         (1407 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002524993.1| zinc finger protein, putative [Ricinus commu...   559   e-157
ref|XP_002275968.1| PREDICTED: DNA/RNA-binding protein KIN17 [Vi...   557   e-156
ref|XP_003545038.1| PREDICTED: DNA/RNA-binding protein KIN17-lik...   553   e-155
ref|XP_004145669.1| PREDICTED: DNA/RNA-binding protein KIN17-lik...   552   e-155
ref|XP_003519560.1| PREDICTED: DNA/RNA-binding protein KIN17-lik...   551   e-154

>ref|XP_002524993.1| zinc finger protein, putative [Ricinus communis]
            gi|223535737|gb|EEF37400.1| zinc finger protein, putative
            [Ricinus communis]
          Length = 398

 Score =  559 bits (1441), Expect = e-157
 Identities = 280/401 (69%), Positives = 323/401 (80%), Gaps = 10/401 (2%)
 Frame = -3

Query: 1375 MGKNDFLTPKAIANRIKAKGLQKLRWYCQMCEKQCRDENGFKCHCMSESHQRQMEVFGQN 1196
            MGKNDFLTPKAIANRIKAKGLQKLRWYCQMC+KQCRDENGFKCHCMSESHQRQM++FG+N
Sbjct: 1    MGKNDFLTPKAIANRIKAKGLQKLRWYCQMCQKQCRDENGFKCHCMSESHQRQMQIFGEN 60

Query: 1195 PHRIVDGYTEEFEESFLDHMKRSHRFSRVAATVIYNEYIANRHHVHMNSTQWATLTEFVK 1016
            PHRIVDGY+EEFE SFLD M+RSHRFSRVAATV+YNEYI +RHHVHMNSTQW TLTEFVK
Sbjct: 61   PHRIVDGYSEEFENSFLDLMRRSHRFSRVAATVVYNEYIHDRHHVHMNSTQWLTLTEFVK 120

Query: 1015 YLGKEGKCKVEETPKGWFMTYMDRDSETMFKERLKNKRLKSDVVEEVKHEREIQKQIELA 836
            YLG+ GKCKVEETPKGWF+TY+DRDSET+FKE++KNKRL++D+VEE K EREIQKQIE A
Sbjct: 121  YLGRTGKCKVEETPKGWFITYIDRDSETLFKEKMKNKRLRADLVEEEKQEREIQKQIEKA 180

Query: 835  AQMVPSAVLENGSEELVMP-----KLEPGVKIAFXXXXXXXXXXXXXXXTK--VVFXXXX 677
             Q + +      S E+  P     KLE GVKI F               +K  +VF    
Sbjct: 181  EQFLTTVKNGGESNEVSEPPAKELKLEDGVKIGFALGSKSNVGKDKGESSKSRLVF---- 236

Query: 676  XXXXXXXXXXXXSTEGGNV---GRSALDEVMKEDEKAKERINRKDYWVCEGIIVKVMNKE 506
                        + E G+V   G+SAL+E+MKE+EKAKER NRKDYWVCEG+IVKVM+K 
Sbjct: 237  EEIEEREKKFEKNKENGHVGKSGKSALEELMKEEEKAKERSNRKDYWVCEGVIVKVMSKA 296

Query: 505  LADKGYYKQKGLVVKVIDNYVGEIQMLENKHVIRVDQAELQTVLPQIGGLVKIVNGAYRG 326
            LA KGYYKQKG+V KVID YVGE++MLE KHV+RVDQ EL+TV+PQIGGLV+IVNGAYRG
Sbjct: 297  LASKGYYKQKGVVRKVIDKYVGEVEMLETKHVLRVDQEELETVIPQIGGLVRIVNGAYRG 356

Query: 325  SKAKLVSVDFDNYCAKVQIEKGLYDGRVLQAVAYEDICKLA 203
            S A+L+ VD + +CA VQIEKG+YDGRVL+AV YEDICKLA
Sbjct: 357  SNARLLKVDTEKFCAMVQIEKGIYDGRVLKAVEYEDICKLA 397


>ref|XP_002275968.1| PREDICTED: DNA/RNA-binding protein KIN17 [Vitis vinifera]
          Length = 391

 Score =  557 bits (1435), Expect = e-156
 Identities = 271/392 (69%), Positives = 321/392 (81%), Gaps = 2/392 (0%)
 Frame = -3

Query: 1375 MGKNDFLTPKAIANRIKAKGLQKLRWYCQMCEKQCRDENGFKCHCMSESHQRQMEVFGQN 1196
            MGKN+FLTPKAIANRIKAKGLQKLRWYCQMC+KQCRDENGFKCHCMSESHQRQM+VFGQN
Sbjct: 1    MGKNEFLTPKAIANRIKAKGLQKLRWYCQMCQKQCRDENGFKCHCMSESHQRQMQVFGQN 60

Query: 1195 PHRIVDGYTEEFEESFLDHMKRSHRFSRVAATVIYNEYIANRHHVHMNSTQWATLTEFVK 1016
            P+RI+DGY+EEFE  FL+HMKRSHRFSRVAATV+YNEYIA+RHH+HMNST+WATLTEFVK
Sbjct: 61   PNRIIDGYSEEFEREFLEHMKRSHRFSRVAATVVYNEYIADRHHIHMNSTEWATLTEFVK 120

Query: 1015 YLGKEGKCKVEETPKGWFMTYMDRDSETMFKERLKNKRLKSDVVEEVKHEREIQKQIELA 836
            YLG+ GKCKVEETPKGWF+TY+DRDSET+FKERLKNKR+++D+VEE K ER+I++QIE A
Sbjct: 121  YLGRTGKCKVEETPKGWFITYIDRDSETLFKERLKNKRMRADMVEEEKQERQIKRQIEKA 180

Query: 835  AQMVP--SAVLENGSEELVMPKLEPGVKIAFXXXXXXXXXXXXXXXTKVVFXXXXXXXXX 662
             Q++P      +    ELV  K E G KIAF               +K+VF         
Sbjct: 181  EQLMPLVGGSSQPNESELVSLKSENGGKIAFALGSSKLIVKEKVESSKLVFEDGESENIV 240

Query: 661  XXXXXXXSTEGGNVGRSALDEVMKEDEKAKERINRKDYWVCEGIIVKVMNKELADKGYYK 482
                       G  G SALDE+M+E EK KER NRKDYW+CEGI+VKVM+K LA+KGYYK
Sbjct: 241  KGKGAGG---SGIGGVSALDELMREQEKVKERNNRKDYWLCEGIVVKVMSKALAEKGYYK 297

Query: 481  QKGLVVKVIDNYVGEIQMLENKHVIRVDQAELQTVLPQIGGLVKIVNGAYRGSKAKLVSV 302
            +KG+V+KVID YVGEI+ML++KHV+RVDQ EL+TV+PQIGGL++IVNGAYRGS A+L++V
Sbjct: 298  KKGIVLKVIDRYVGEIEMLDSKHVLRVDQEELETVIPQIGGLLRIVNGAYRGSNARLLAV 357

Query: 301  DFDNYCAKVQIEKGLYDGRVLQAVAYEDICKL 206
            D + Y AKVQIEKG+YDGRVLQAV YEDICK+
Sbjct: 358  DTEKYSAKVQIEKGIYDGRVLQAVEYEDICKV 389


>ref|XP_003545038.1| PREDICTED: DNA/RNA-binding protein KIN17-like isoform 1 [Glycine max]
            gi|356553389|ref|XP_003545039.1| PREDICTED:
            DNA/RNA-binding protein KIN17-like isoform 2 [Glycine
            max]
          Length = 398

 Score =  553 bits (1426), Expect = e-155
 Identities = 274/399 (68%), Positives = 322/399 (80%), Gaps = 8/399 (2%)
 Frame = -3

Query: 1375 MGKNDFLTPKAIANRIKAKGLQKLRWYCQMCEKQCRDENGFKCHCMSESHQRQMEVFGQN 1196
            MGKN+FLTPKAIANRIKAKGLQKLRWYCQMC+KQCRDENGFKCHCMSE HQRQM++FGQN
Sbjct: 1    MGKNEFLTPKAIANRIKAKGLQKLRWYCQMCQKQCRDENGFKCHCMSEGHQRQMQIFGQN 60

Query: 1195 PHRIVDGYTEEFEESFLDHMKRSHRFSRVAATVIYNEYIANRHHVHMNSTQWATLTEFVK 1016
            PHRIV+GY+EEFE +FL+HMKRSHRFSRVAATV+YNEYI +RHHVHMNSTQWATLTEFVK
Sbjct: 61   PHRIVEGYSEEFETTFLEHMKRSHRFSRVAATVVYNEYINDRHHVHMNSTQWATLTEFVK 120

Query: 1015 YLGKEGKCKVEETPKGWFMTYMDRDSETMFKERLKNKRLKSDVVEEVKHEREIQKQIELA 836
            YLG+ GKCKVEETPKGWF+TY+DRDSET+FKER+KNKR+K+D+V+E K E+EI++QIE A
Sbjct: 121  YLGRTGKCKVEETPKGWFITYIDRDSETLFKERMKNKRIKADMVDEEKQEKEIRRQIEKA 180

Query: 835  AQMVPSAVLENGSEELVMP----KLEPGVKIAF--XXXXXXXXXXXXXXXTKVVF--XXX 680
             QM+  A  E      V P     +E G+KI F                 ++VVF     
Sbjct: 181  EQMMQPATSEADQPSQVEPLRELNMEDGIKIGFSLGSSLAKPVVKEKHEASRVVFDEGEE 240

Query: 679  XXXXXXXXXXXXXSTEGGNVGRSALDEVMKEDEKAKERINRKDYWVCEGIIVKVMNKELA 500
                           E G  G+SALDE+M+E+EK KE+INRKDYW+ EGI+VKVM+K LA
Sbjct: 241  EKYNERNPRNNLKRKESGG-GKSALDEMMREEEKKKEKINRKDYWLHEGIVVKVMSKVLA 299

Query: 499  DKGYYKQKGLVVKVIDNYVGEIQMLENKHVIRVDQAELQTVLPQIGGLVKIVNGAYRGSK 320
            +KGYYKQKG+V KVID YVGEI+MLE+KHV+RVDQAEL+TV+PQ+GG VKIVNGAYRGS 
Sbjct: 300  EKGYYKQKGVVRKVIDKYVGEIEMLESKHVLRVDQAELETVIPQVGGRVKIVNGAYRGSI 359

Query: 319  AKLVSVDFDNYCAKVQIEKGLYDGRVLQAVAYEDICKLA 203
            AKL+ VD DN+CAKV IEKG+YDGRVL+AV YEDICK+A
Sbjct: 360  AKLLGVDTDNFCAKVHIEKGVYDGRVLKAVEYEDICKVA 398


>ref|XP_004145669.1| PREDICTED: DNA/RNA-binding protein KIN17-like [Cucumis sativus]
            gi|449533194|ref|XP_004173561.1| PREDICTED:
            DNA/RNA-binding protein KIN17-like [Cucumis sativus]
          Length = 397

 Score =  552 bits (1423), Expect = e-155
 Identities = 268/399 (67%), Positives = 323/399 (80%), Gaps = 8/399 (2%)
 Frame = -3

Query: 1375 MGKNDFLTPKAIANRIKAKGLQKLRWYCQMCEKQCRDENGFKCHCMSESHQRQMEVFGQN 1196
            MGKN+FLTPKAIANRIKAKGLQKLRWYCQMC+KQCRDENGFKCHCMSESHQRQM++FGQN
Sbjct: 1    MGKNEFLTPKAIANRIKAKGLQKLRWYCQMCQKQCRDENGFKCHCMSESHQRQMQIFGQN 60

Query: 1195 PHRIVDGYTEEFEESFLDHMKRSHRFSRVAATVIYNEYIANRHHVHMNSTQWATLTEFVK 1016
            PHRIV+GY+EEFE SF++H+KRSHRFSRVAATV+YNEYI +RHH+HMNSTQWATLTEF+K
Sbjct: 61   PHRIVEGYSEEFETSFMEHIKRSHRFSRVAATVVYNEYINDRHHIHMNSTQWATLTEFIK 120

Query: 1015 YLGKEGKCKVEETPKGWFMTYMDRDSETMFKERLKNKRLKSDVVEEVKHEREIQKQIELA 836
            +LG+ G+CKVEETPKGWF+TY+DRDSET+FKER+KNKR+++D+ EE K EREI++QIE A
Sbjct: 121  HLGRTGQCKVEETPKGWFITYIDRDSETLFKERMKNKRMRADLAEEEKQEREIKRQIERA 180

Query: 835  AQMVPSAVLENGSEELVMP------KLEPGVKIAFXXXXXXXXXXXXXXXTKVVFXXXXX 674
             Q  P   L + S EL+        KLE GVK+ F               ++VVF     
Sbjct: 181  EQFAP---LASASAELLEAEQTRELKLESGVKLGFALGTTSKLKEKKGESSRVVFDEDET 237

Query: 673  XXXXXXXXXXXSTE--GGNVGRSALDEVMKEDEKAKERINRKDYWVCEGIIVKVMNKELA 500
                       S    G   G S+L+E+MKE+E  KE++NRKDYW+C+GIIVK+M+K+LA
Sbjct: 238  YETIKGKPEGTSKNRMGSGGGLSSLEELMKEEEMKKEKLNRKDYWLCDGIIVKIMSKDLA 297

Query: 499  DKGYYKQKGLVVKVIDNYVGEIQMLENKHVIRVDQAELQTVLPQIGGLVKIVNGAYRGSK 320
            +KGYYKQKG+V KVID YVGEI+ML+ KHV+RVDQ EL+TV+PQIGGLV+IVNGAYRGS 
Sbjct: 298  EKGYYKQKGVVRKVIDKYVGEIEMLDGKHVLRVDQEELETVIPQIGGLVRIVNGAYRGSN 357

Query: 319  AKLVSVDFDNYCAKVQIEKGLYDGRVLQAVAYEDICKLA 203
            A+L+ VD D +CAKVQIEKG+YDGRVL+AV YEDICKLA
Sbjct: 358  ARLLGVDTDKFCAKVQIEKGVYDGRVLKAVEYEDICKLA 396


>ref|XP_003519560.1| PREDICTED: DNA/RNA-binding protein KIN17-like isoform 1 [Glycine max]
            gi|356501497|ref|XP_003519561.1| PREDICTED:
            DNA/RNA-binding protein KIN17-like isoform 2 [Glycine
            max]
          Length = 398

 Score =  551 bits (1421), Expect = e-154
 Identities = 272/399 (68%), Positives = 321/399 (80%), Gaps = 8/399 (2%)
 Frame = -3

Query: 1375 MGKNDFLTPKAIANRIKAKGLQKLRWYCQMCEKQCRDENGFKCHCMSESHQRQMEVFGQN 1196
            MGKN+FLTPKAIANRIKAKGLQKLRWYCQMC+KQCRDENGFKCHCMSE HQRQM++FGQN
Sbjct: 1    MGKNEFLTPKAIANRIKAKGLQKLRWYCQMCQKQCRDENGFKCHCMSEGHQRQMQIFGQN 60

Query: 1195 PHRIVDGYTEEFEESFLDHMKRSHRFSRVAATVIYNEYIANRHHVHMNSTQWATLTEFVK 1016
            PHRIV+GY+EEFE +FL+HMKRSHRFSRVAATV+YNEYI +RHH+HMNSTQWATLTEFVK
Sbjct: 61   PHRIVEGYSEEFESTFLEHMKRSHRFSRVAATVVYNEYINDRHHIHMNSTQWATLTEFVK 120

Query: 1015 YLGKEGKCKVEETPKGWFMTYMDRDSETMFKERLKNKRLKSDVVEEVKHEREIQKQIELA 836
            YLG+ GKCKVEETPKGWF+TY+DRDSET+FKER+KNKR+K+D+V+E K E+EI++QIE A
Sbjct: 121  YLGRTGKCKVEETPKGWFITYIDRDSETLFKERMKNKRIKADMVDEEKQEKEIRRQIEKA 180

Query: 835  AQMVPSAVLENGSEELVMP----KLEPGVKIAF--XXXXXXXXXXXXXXXTKVVF--XXX 680
             QM+     E      V P     +E G+KI F                 ++VVF     
Sbjct: 181  EQMMQPPTSEADQPSQVEPPRELNMEDGIKIGFSLGSTSAKPVVKEKHDASRVVFDEGDE 240

Query: 679  XXXXXXXXXXXXXSTEGGNVGRSALDEVMKEDEKAKERINRKDYWVCEGIIVKVMNKELA 500
                           E G  G+SALDE+M+E+EK KE+INRKDYW+ EGI+VKVM+K LA
Sbjct: 241  EKYNGRNPGNNLKRKESGG-GKSALDEMMREEEKKKEKINRKDYWLHEGIVVKVMSKVLA 299

Query: 499  DKGYYKQKGLVVKVIDNYVGEIQMLENKHVIRVDQAELQTVLPQIGGLVKIVNGAYRGSK 320
            +KGYYKQKG+V KVID YVGEI+MLE+KHV+RVDQAEL+TV+PQ+GG VKIVNGAYRGS 
Sbjct: 300  EKGYYKQKGVVRKVIDKYVGEIEMLESKHVLRVDQAELETVIPQVGGRVKIVNGAYRGSI 359

Query: 319  AKLVSVDFDNYCAKVQIEKGLYDGRVLQAVAYEDICKLA 203
            AKL+ VD DN+CAKVQIEKG YDGRVL++V YEDICK+A
Sbjct: 360  AKLLGVDTDNFCAKVQIEKGAYDGRVLKSVEYEDICKVA 398


Top