BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00012038
         (1974 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280466.2| PREDICTED: E3 ubiquitin-protein ligase At4g1...   509   e-141
ref|XP_002284536.2| PREDICTED: E3 ubiquitin-protein ligase At4g1...   488   e-135
ref|XP_002516614.1| ring finger protein, putative [Ricinus commu...   481   e-133
ref|XP_004138872.1| PREDICTED: E3 ubiquitin-protein ligase At4g1...   478   e-132
ref|XP_003546278.1| PREDICTED: E3 ubiquitin-protein ligase At4g1...   475   e-131

>ref|XP_002280466.2| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Vitis
            vinifera] gi|297743322|emb|CBI36189.3| unnamed protein
            product [Vitis vinifera]
          Length = 416

 Score =  509 bits (1311), Expect = e-141
 Identities = 270/445 (60%), Positives = 304/445 (68%), Gaps = 6/445 (1%)
 Frame = +2

Query: 224  MEVSPLEQHSESQTDRHPLLMERSETQRNSEHVIDITRGGVAXXXXXXXXXXXXXXPPQG 403
            M +  LE HS SQT ++PLLMER+E   + EH+IDITR   A              PPQ 
Sbjct: 1    MAIPSLEPHSGSQTYKYPLLMERTENHGDREHIIDITRNDDASSSSSHDDHHPVMNPPQH 60

Query: 404  QERPSSSARVPISQAS----NSRNSSFIRRGDGYGRRHRSPLNSGLWISIELVVTVSQII 571
            +ERPSSS + P +Q S    NSRNSSF+RR DGY RR RSPLNSGLWIS+ELVVTVSQII
Sbjct: 61   EERPSSSTQTPTNQTSSNRLNSRNSSFMRRSDGYSRRRRSPLNSGLWISVELVVTVSQII 120

Query: 572  ASIVVLSLSRHETPQAPLFAWIIGYASGCVATLPLLYWRYRHRNTXXXXXXXXXXXXXXX 751
            ASIVVLSLSRHE P+APLFAW++GYASGC ATLP+LYWRYR RN                
Sbjct: 121  ASIVVLSLSRHENPRAPLFAWVVGYASGCFATLPILYWRYRTRNQ--------------- 165

Query: 752  HTNPPPEPTPYAAISVSQASEEEDHHVARNGQNVRSLSVRFNVLVDHLKMALDCFFAVWF 931
                         ISV+QASE       R  + V    +RF+ +VDH KMALDCFFAVWF
Sbjct: 166  ------------TISVNQASETAGA-ATRRSRFVGIFRMRFSGMVDHFKMALDCFFAVWF 212

Query: 932  VVGNVWIFGGHSSAAEAPNLYRLCIVFLTFSCIGYAMPFILCATXXXXXXXXXXXXGFRE 1111
            VVGNVWIFGGHSS ++AP LYRLCIVFLTFSCIGYAMPFILCAT            GFRE
Sbjct: 213  VVGNVWIFGGHSSPSDAPKLYRLCIVFLTFSCIGYAMPFILCATICCCLPCIISILGFRE 272

Query: 1112 DLTHTRGATPESISALPTYKFKTKKSSGGGDAEINSDXXXXXXXXXXXTEKERAISGEDA 1291
            DL+ TRGA PESI ALPTYKFK KK+    D E+NS            TEKERAISGEDA
Sbjct: 273  DLSQTRGAAPESIDALPTYKFKLKKNGDVDDQEVNS-GAGEGGVLAAGTEKERAISGEDA 331

Query: 1292 VCCICLAKYADNDELRELPCNHFFHMECVDKWLKINALCPLCKCEVGENNEDSPSAANSS 1471
            VCCICLAKYADN+ELRELPC HFFH+ECVDKWLKINALCPLCK EVG  +  SP+A ++S
Sbjct: 332  VCCICLAKYADNEELRELPCCHFFHVECVDKWLKINALCPLCKFEVGGTSGASPNATSTS 391

Query: 1472 HRTGERRVGNESANGDA--YGSTVF 1540
                ER  GN S  G +  YG+T+F
Sbjct: 392  EHQRERPTGNASTEGGSSIYGTTMF 416


>ref|XP_002284536.2| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Vitis
            vinifera]
          Length = 421

 Score =  488 bits (1256), Expect = e-135
 Identities = 265/417 (63%), Positives = 295/417 (70%), Gaps = 12/417 (2%)
 Frame = +2

Query: 224  MEVSPLEQHSESQTDRHPLLMERSETQRNSEHVIDITRGGVAXXXXXXXXXXXXXXPP-Q 400
            M +  LE HS+SQ+D +PLLME+   Q ++EH+IDITR G A                 Q
Sbjct: 1    MAIPSLELHSKSQSDIYPLLMEQPGNQIDTEHIIDITRSGDASSSNSSNDGPSTSLDQLQ 60

Query: 401  GQERPSSSARVPISQ-------ASNSRNSSFIRRGDGYGRRHRSPLNSGLWISIELVVTV 559
              +RP+SSARVPISQ        SNSRNS F RR D   RR RSPLNSGLWISIEL +TV
Sbjct: 61   HDDRPASSARVPISQPSFSSSNVSNSRNS-FRRRADA--RRRRSPLNSGLWISIELALTV 117

Query: 560  SQIIASIVVLSLSRHETPQAPLFAWIIGYASGCVATLPLLYWRYRHRNTXXXXXXXXXXX 739
            SQIIAS+VVLSLSRHE P APLF WI+GYASGCVATLP+LYWR+RHRN            
Sbjct: 118  SQIIASVVVLSLSRHEHPHAPLFTWIVGYASGCVATLPILYWRFRHRNQGHEQESAQSRQ 177

Query: 740  XXXXHTNPPPEPTPYAAISVSQASEEEDHH----VARNGQNVRSLSVRFNVLVDHLKMAL 907
                H+N P  PT   ++SV+  SEEED        RN Q+VR LS R  VLV++ KMAL
Sbjct: 178  VSF-HSNLPGGPT--FSLSVTGTSEEEDRQPSVPATRNSQSVRRLSARLKVLVEYFKMAL 234

Query: 908  DCFFAVWFVVGNVWIFGGHSSAAEAPNLYRLCIVFLTFSCIGYAMPFILCATXXXXXXXX 1087
            DCFFAVWFVVGNVWIFGGHSS++EAPNLYRLCIVFLTFSCIGYAMPFILCAT        
Sbjct: 235  DCFFAVWFVVGNVWIFGGHSSSSEAPNLYRLCIVFLTFSCIGYAMPFILCATICCCLPCI 294

Query: 1088 XXXXGFREDLTHTRGATPESISALPTYKFKTKKSSGGGDAEINSDXXXXXXXXXXXTEKE 1267
                GFREDLT TRGAT ESI+ALPTYKFK KK+  G D E NS            TE+E
Sbjct: 295  ISILGFREDLTQTRGATSESINALPTYKFKLKKNRNGDDREGNS-GAGEGGVVAAGTERE 353

Query: 1268 RAISGEDAVCCICLAKYADNDELRELPCNHFFHMECVDKWLKINALCPLCKCEVGEN 1438
            R ISGEDAVCCICLAKYA+NDELRELPC+HFFH ECVDKWLKINALCPLCK EVGE+
Sbjct: 354  RVISGEDAVCCICLAKYANNDELRELPCSHFFHKECVDKWLKINALCPLCKREVGES 410


>ref|XP_002516614.1| ring finger protein, putative [Ricinus communis]
            gi|223544434|gb|EEF45955.1| ring finger protein, putative
            [Ricinus communis]
          Length = 437

 Score =  481 bits (1238), Expect = e-133
 Identities = 261/442 (59%), Positives = 297/442 (67%), Gaps = 12/442 (2%)
 Frame = +2

Query: 224  MEVSPLEQHSESQTDRHPLLMERSETQRNSEHVIDITRGGVAXXXXXXXXXXXXXXPPQG 403
            M+VS  EQHSES TD  PLLME+S +  +SEH+IDI R   +                  
Sbjct: 1    MDVSSTEQHSESLTDTCPLLMEQSNSINSSEHIIDIPRSSDSSPSTSHDRTTSGLEASSN 60

Query: 404  QERPSSSARVP--------ISQASNSRNSSFIRRGDGYGRRHRSPLNSGLWISIELVVTV 559
            ++RP++S R P         S  SN+RNSS IRRG+   RR RSPLNSGLWIS+ELV+TV
Sbjct: 61   EDRPTTSVRTPSISHLSTGTSNGSNTRNSSLIRRGEA--RRRRSPLNSGLWISVELVLTV 118

Query: 560  SQIIASIVVLSLSRHETPQAPLFAWIIGYASGCVATLPLLYWRYRHRNTXXXXXXXXXXX 739
            SQIIASIVVLSLSRHE P+APLFAWI+GYASGCVATLPLLYWRYRHRN            
Sbjct: 119  SQIIASIVVLSLSRHEHPRAPLFAWIVGYASGCVATLPLLYWRYRHRNQVTEQEAAQPRQ 178

Query: 740  XXXXHTNPPPEPTPYAAISVSQASEEEDHHVA----RNGQNVRSLSVRFNVLVDHLKMAL 907
                H + P +     +IS+++ SE  D   +    R GQN  +L+ R   LV++ KMAL
Sbjct: 179  SS--HFSVPGDSI---SISITRNSEVVDRRSSSTSSRGGQNSGALNARLKTLVEYFKMAL 233

Query: 908  DCFFAVWFVVGNVWIFGGHSSAAEAPNLYRLCIVFLTFSCIGYAMPFILCATXXXXXXXX 1087
            DCFFAVWFVVGNVWIFGGHSSA EAPN+YRLCIVFLTFSCIGYAMPFILCAT        
Sbjct: 234  DCFFAVWFVVGNVWIFGGHSSATEAPNMYRLCIVFLTFSCIGYAMPFILCATICCCLPCI 293

Query: 1088 XXXXGFREDLTHTRGATPESISALPTYKFKTKKSSGGGDAEINSDXXXXXXXXXXXTEKE 1267
                GFREDL  TRGAT ESI ALPTYKFK  K   G D + NS            TE E
Sbjct: 294  ISLLGFREDLGQTRGATSESIDALPTYKFKLNKHRTGDDRDSNS-GAGDGGVVAAGTEHE 352

Query: 1268 RAISGEDAVCCICLAKYADNDELRELPCNHFFHMECVDKWLKINALCPLCKCEVGENNED 1447
            R ISGEDAVCCICLAKYA+NDELRELPC+HFFH +CVDKWLKINA CPLCK EVGE+   
Sbjct: 353  RFISGEDAVCCICLAKYANNDELRELPCSHFFHKDCVDKWLKINASCPLCKTEVGESVMG 412

Query: 1448 SPSAANSSHRTGERRVGNESAN 1513
            S +A N+  R  E RVGN  A+
Sbjct: 413  SLTATNTGQRQVESRVGNGLAS 434


>ref|XP_004138872.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Cucumis
            sativus] gi|449499624|ref|XP_004160867.1| PREDICTED: E3
            ubiquitin-protein ligase At4g11680-like [Cucumis sativus]
          Length = 424

 Score =  478 bits (1229), Expect = e-132
 Identities = 260/425 (61%), Positives = 293/425 (68%), Gaps = 11/425 (2%)
 Frame = +2

Query: 224  MEVSPLEQHSESQTDRHPLLMERSETQRNSEHVIDITRGGVAXXXXXXXXXXXXXX-PPQ 400
            M+V  +E + +S+ D +PLLM R E   +SEH+IDIT  G +                 Q
Sbjct: 1    MDVPSVELNCDSEGDSYPLLMARPEHSNSSEHIIDITGAGDSGPSGLPHGRSSNGLNSSQ 60

Query: 401  GQERPSSSARVPISQ------ASNSRNSSFIRRGDGYGRRHRSPLNSGLWISIELVVTVS 562
             ++RPSSS RVP+SQ       SNSRNSSFIRRGD   RR RSPLNSGLWISIEL++T+S
Sbjct: 61   PEDRPSSSTRVPLSQPSTSSTGSNSRNSSFIRRGDA--RRRRSPLNSGLWISIELLLTMS 118

Query: 563  QIIASIVVLSLSRHETPQAPLFAWIIGYASGCVATLPLLYWRYRHRNTXXXXXXXXXXXX 742
            QIIA+I+VLSLS++E P+APLFAWI+GYASGC ATLPLLYWRYRHRN             
Sbjct: 119  QIIAAIIVLSLSKNEKPRAPLFAWIVGYASGCGATLPLLYWRYRHRNQASEQDSLQSSQS 178

Query: 743  XXXHTNPPPEPTPYAAISVSQASE-EEDHHVA---RNGQNVRSLSVRFNVLVDHLKMALD 910
                 N P  P    ++SVS+ASE EE  H A   R  Q    LS R  VLV++ KM LD
Sbjct: 179  SS-RINVPAGPF---SLSVSRASEGEELQHPAPSPRGSQGSGVLSARLKVLVEYFKMGLD 234

Query: 911  CFFAVWFVVGNVWIFGGHSSAAEAPNLYRLCIVFLTFSCIGYAMPFILCATXXXXXXXXX 1090
            CFFAVWFVVGNVWIFGGHSSA+EAPNLYRLCIVFLTFSCIGYAMPFILC T         
Sbjct: 235  CFFAVWFVVGNVWIFGGHSSASEAPNLYRLCIVFLTFSCIGYAMPFILCVTICCCLPCII 294

Query: 1091 XXXGFREDLTHTRGATPESISALPTYKFKTKKSSGGGDAEINSDXXXXXXXXXXXTEKER 1270
               GFREDL+ TRGAT ESI+ALPTYKFK KKS  G D E NS            TEKER
Sbjct: 295  SILGFREDLSQTRGATSESINALPTYKFKLKKSRSGDDRENNSGAGEGGGVVAAGTEKER 354

Query: 1271 AISGEDAVCCICLAKYADNDELRELPCNHFFHMECVDKWLKINALCPLCKCEVGENNEDS 1450
             ISGEDAVCCICLAKYA+NDELRELPC+HFFH +CVDKWLKINALCPLCK EVGE+   S
Sbjct: 355  VISGEDAVCCICLAKYANNDELRELPCSHFFHKDCVDKWLKINALCPLCKAEVGESIVGS 414

Query: 1451 PSAAN 1465
                N
Sbjct: 415  LEGTN 419


>ref|XP_003546278.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Glycine max]
          Length = 424

 Score =  475 bits (1222), Expect = e-131
 Identities = 249/427 (58%), Positives = 291/427 (68%), Gaps = 11/427 (2%)
 Frame = +2

Query: 224  MEVSPLEQHSESQTDRHPLLMERSETQRNSEHVIDITRGGVAXXXXXXXXXXXXXXPPQG 403
            M+V+ L  +S +QTD+HPLLME+ ET    +HVIDITR G A               PQ 
Sbjct: 1    MDVTSLGSNSNTQTDQHPLLMEQPETHNGHQHVIDITRNGEALTTSSRNDQYSEMHLPQN 60

Query: 404  QERPSSSARVPISQAS-------NSRNSSFIRRGDGYGRRHRSPLNSGLWISIELVVTVS 562
            +++ +  A+    Q S       NSRNS+ +RRG+GYG   RSPLNSGLWIS+ELVVTVS
Sbjct: 61   EDQAAGDAQNSSHQTSSSSAPRLNSRNSASLRRGEGYGHHGRSPLNSGLWISVELVVTVS 120

Query: 563  QIIASIVVLSLSRHETPQAPLFAWIIGYASGCVATLPLLYWRYRHRNTXXXXXXXXXXXX 742
            QIIASIVVLSLSR+E PQAPLFAWI+GYASGCVATLP+LYWR+R+RN             
Sbjct: 121  QIIASIVVLSLSRNENPQAPLFAWIVGYASGCVATLPILYWRFRNRNQSNEQDTSQASQG 180

Query: 743  XXXHTNPPPEPTPYAAISVSQASEEEDHHVARNGQNVR----SLSVRFNVLVDHLKMALD 910
                +NPP     Y +I VS  S+EE+ H  R+         + + R N LVDH KMALD
Sbjct: 181  SSG-SNPPDRS--YNSIHVSHVSDEENGHATRSASRNTIMPGAFTSRLNGLVDHFKMALD 237

Query: 911  CFFAVWFVVGNVWIFGGHSSAAEAPNLYRLCIVFLTFSCIGYAMPFILCATXXXXXXXXX 1090
            CFFAVWFVVGNVWIFGGH+S ++AP LYRLCIVFLTFSCIGYAMPFILCAT         
Sbjct: 238  CFFAVWFVVGNVWIFGGHTSPSDAPQLYRLCIVFLTFSCIGYAMPFILCATICCCLPCII 297

Query: 1091 XXXGFREDLTHTRGATPESISALPTYKFKTKKSSGGGDAEINSDXXXXXXXXXXXTEKER 1270
               G RED +  RGAT ESI+ALP +KFK K +  G D ++N+            TEKER
Sbjct: 298  SVLGIREDFSQNRGATVESINALPIFKFKLKNNENGDDQDVNA-AIDEGGILAAGTEKER 356

Query: 1271 AISGEDAVCCICLAKYADNDELRELPCNHFFHMECVDKWLKINALCPLCKCEVGENNEDS 1450
             ISGEDAVCCICLAKYAD+DELRELPC+HFFH+ CVDKWLKINA CPLCK EVG +N  S
Sbjct: 357  MISGEDAVCCICLAKYADDDELRELPCSHFFHVMCVDKWLKINATCPLCKNEVGTSNGGS 416

Query: 1451 PSAANSS 1471
            PSA NSS
Sbjct: 417  PSAWNSS 423