BLASTX nr result

ID: Coptis24_contig00012035 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00012035
         (941 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003627837.1| NBS resistance protein [Medicago truncatula]...   113   6e-26
ref|XP_003613024.1| hypothetical protein MTR_5g031820 [Medicago ...   117   8e-26
ref|XP_003614444.1| hypothetical protein MTR_5g053720 [Medicago ...   102   3e-25
ref|XP_003620586.1| hypothetical protein MTR_6g087240 [Medicago ...   116   5e-25
ref|XP_003589413.1| hypothetical protein MTR_1g023970 [Medicago ...   116   5e-25

>ref|XP_003627837.1| NBS resistance protein [Medicago truncatula]
            gi|355521859|gb|AET02313.1| NBS resistance protein
            [Medicago truncatula]
          Length = 1731

 Score =  113 bits (282), Expect(2) = 6e-26
 Identities = 60/156 (38%), Positives = 85/156 (54%)
 Frame = -3

Query: 738  KISPLGKGYIILRFSNEGDFKRVSFGVPWYLAKQLLILSNWTPNFSPELHRQSTALVWVR 559
            K+ PLGKGY    F +  D +++       L   LL  S WT +F     +Q+   +W+R
Sbjct: 1162 KMVPLGKGYYDFHFDSADDLRKIWAAGTVNLKPGLLRFSQWTKDFKYLAQKQTHVSLWIR 1221

Query: 558  FPGLSFEYWEVESLMSMGRAIGGPIRVDKNSLERDYGYYASVFVDIDLSKPIPDKILVEV 379
               L  EYW    L  +  A+G PI +D  +  R +G+YA + VDIDLSK   D+ILVE 
Sbjct: 1222 LVELPQEYWRERILKEIASAVGTPIDIDGPTRNRTFGHYARILVDIDLSKRTFDEILVE- 1280

Query: 378  GDKYEFWQEIRLGKLPKFCNHCKIVGHLVTECRQLH 271
             D + F  E++  + P FC+HC  +GH V+ CR LH
Sbjct: 1281 RDDFAFKVEVQYERRPLFCHHCFAIGHDVSTCRWLH 1316



 Score = 31.2 bits (69), Expect(2) = 6e-26
 Identities = 17/44 (38%), Positives = 24/44 (54%)
 Frame = -2

Query: 937  QTVDLDSLPLPSKRGETPSIRIPIKAVEKGLEACKYSLVARLDM 806
            + VD    P P  +G+  SI+I  +   +GLE CK  L ARL +
Sbjct: 1092 KVVDDSPFPTPCIKGDALSIKICQEEYHRGLEDCKNVLRARLTL 1135


>ref|XP_003613024.1| hypothetical protein MTR_5g031820 [Medicago truncatula]
           gi|355514359|gb|AES95982.1| hypothetical protein
           MTR_5g031820 [Medicago truncatula]
          Length = 664

 Score =  117 bits (294), Expect(2) = 8e-26
 Identities = 61/156 (39%), Positives = 88/156 (56%)
 Frame = -3

Query: 738 KISPLGKGYIILRFSNEGDFKRVSFGVPWYLAKQLLILSNWTPNFSPELHRQSTALVWVR 559
           K+ PLGKGY    F +  D K++       L   LL  S WT +F     +Q+ A +W+R
Sbjct: 123 KMVPLGKGYYDFHFDSAEDLKKIWVVGTVNLKPGLLRFSQWTKDFKILTQKQTHASLWIR 182

Query: 558 FPGLSFEYWEVESLMSMGRAIGGPIRVDKNSLERDYGYYASVFVDIDLSKPIPDKILVEV 379
              L  EYW   +LM +  A+G PI +D  +  R +G+YA + VDIDLSK   D++LVE 
Sbjct: 183 LVELPQEYWRERTLMEIASAVGTPIFIDGPTRNRSFGHYARILVDIDLSKKAYDEVLVE- 241

Query: 378 GDKYEFWQEIRLGKLPKFCNHCKIVGHLVTECRQLH 271
            D + F  E++  + P FC+HC  +GH +T CR L+
Sbjct: 242 RDGFAFMVEVQYERRPLFCHHCYSIGHNITTCRWLN 277



 Score = 26.2 bits (56), Expect(2) = 8e-26
 Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
 Frame = -2

Query: 925 LDSLPLPSK--RGETPSIRIPIKAVEKGLEACKYSLVARLDM 806
           +D  P PS   +G   SI+I  +   KG+E C+  L ARL +
Sbjct: 55  IDDKPFPSPIIKGGAFSIKICQEEYRKGVEDCRKVLRARLTL 96


>ref|XP_003614444.1| hypothetical protein MTR_5g053720 [Medicago truncatula]
           gi|355515779|gb|AES97402.1| hypothetical protein
           MTR_5g053720 [Medicago truncatula]
          Length = 524

 Score =  102 bits (253), Expect(2) = 3e-25
 Identities = 55/153 (35%), Positives = 86/153 (56%)
 Frame = -3

Query: 729 PLGKGYIILRFSNEGDFKRVSFGVPWYLAKQLLILSNWTPNFSPELHRQSTALVWVRFPG 550
           PLG+G+    FS++ + + V       L   +L L  WT +F+    R + A VW+R   
Sbjct: 117 PLGRGFFEFTFSSDTNLRMVWASGTVNLKPGVLRLFEWTKDFNMNKQRNTHAQVWIRLME 176

Query: 549 LSFEYWEVESLMSMGRAIGGPIRVDKNSLERDYGYYASVFVDIDLSKPIPDKILVEVGDK 370
           L  EYW   +L  +  A+G P+ +D  + +R YG+YA + VD+D S+ +  +I VE  ++
Sbjct: 177 LPQEYWMDRTLREIACAVGTPLIIDSATSKRLYGHYARILVDMDFSRKMFYEITVE-RER 235

Query: 369 YEFWQEIRLGKLPKFCNHCKIVGHLVTECRQLH 271
           Y F  E+    LP FC+HC+ +GH VT CR L+
Sbjct: 236 YSFNVEVAYEWLPDFCSHCQNIGHDVTFCRWLY 268



 Score = 40.0 bits (92), Expect(2) = 3e-25
 Identities = 21/37 (56%), Positives = 25/37 (67%)
 Frame = -2

Query: 922 DSLPLPSKRGETPSIRIPIKAVEKGLEACKYSLVARL 812
           D+LP P  RGE+ SI I  K  EKGLE CK++L  RL
Sbjct: 49  DNLPKPLIRGESVSITILQKIYEKGLEICKHNLRGRL 85


>ref|XP_003620586.1| hypothetical protein MTR_6g087240 [Medicago truncatula]
           gi|357500705|ref|XP_003620641.1| hypothetical protein
           MTR_6g088090 [Medicago truncatula]
           gi|355495601|gb|AES76804.1| hypothetical protein
           MTR_6g087240 [Medicago truncatula]
           gi|355495656|gb|AES76859.1| hypothetical protein
           MTR_6g088090 [Medicago truncatula]
          Length = 679

 Score =  116 bits (291), Expect(2) = 5e-25
 Identities = 59/156 (37%), Positives = 87/156 (55%)
 Frame = -3

Query: 738 KISPLGKGYIILRFSNEGDFKRVSFGVPWYLAKQLLILSNWTPNFSPELHRQSTALVWVR 559
           K+ PLGKGY    F +  D K++       L   LL  S WT +F  +  +Q+   +W+R
Sbjct: 111 KMVPLGKGYYDFHFDSAEDLKKIWAADTINLKPGLLRFSQWTKDFKFQAQKQTHVSIWIR 170

Query: 558 FPGLSFEYWEVESLMSMGRAIGGPIRVDKNSLERDYGYYASVFVDIDLSKPIPDKILVEV 379
              L  EYW   +L  +  A+G PI +D  +  R +G+YA + VDIDLSK   D++LVE 
Sbjct: 171 LVELPQEYWRERTLKEIASAVGTPIDIDGPTRNRTFGHYARILVDIDLSKKAYDEVLVE- 229

Query: 378 GDKYEFWQEIRLGKLPKFCNHCKIVGHLVTECRQLH 271
            D + F  EI+  + P FC+HC  +GH +T CR ++
Sbjct: 230 RDGFAFMVEIQYERRPLFCHHCYSIGHNITTCRWIN 265



 Score = 24.6 bits (52), Expect(2) = 5e-25
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = -2

Query: 907 PSKRGETPSIRIPIKAVEKGLEACKYSLVARL 812
           P  +G+  SI+I  +   KG+E C+  L ARL
Sbjct: 51  PCIKGDALSIKICQEEYRKGVEDCQKVLRARL 82


>ref|XP_003589413.1| hypothetical protein MTR_1g023970 [Medicago truncatula]
           gi|355478461|gb|AES59664.1| hypothetical protein
           MTR_1g023970 [Medicago truncatula]
          Length = 612

 Score =  116 bits (291), Expect(2) = 5e-25
 Identities = 59/156 (37%), Positives = 87/156 (55%)
 Frame = -3

Query: 738 KISPLGKGYIILRFSNEGDFKRVSFGVPWYLAKQLLILSNWTPNFSPELHRQSTALVWVR 559
           K+ PLGKGY    F +  D K++       L   LL  S WT +F  +  +Q+   +W+R
Sbjct: 111 KMVPLGKGYYDFHFDSAEDLKKIWAADTINLKPGLLRFSQWTKDFKFQAQKQTHVSIWIR 170

Query: 558 FPGLSFEYWEVESLMSMGRAIGGPIRVDKNSLERDYGYYASVFVDIDLSKPIPDKILVEV 379
              L  EYW   +L  +  A+G PI +D  +  R +G+YA + VDIDLSK   D++LVE 
Sbjct: 171 LVELPQEYWRERTLKEIASAVGTPIDIDGPTRNRTFGHYARILVDIDLSKKAYDEVLVE- 229

Query: 378 GDKYEFWQEIRLGKLPKFCNHCKIVGHLVTECRQLH 271
            D + F  EI+  + P FC+HC  +GH +T CR ++
Sbjct: 230 RDGFAFMVEIQYERRPLFCHHCYSIGHNITTCRWIN 265



 Score = 24.6 bits (52), Expect(2) = 5e-25
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = -2

Query: 907 PSKRGETPSIRIPIKAVEKGLEACKYSLVARL 812
           P  +G+  SI+I  +   KG+E C+  L ARL
Sbjct: 51  PCIKGDALSIKICQEEYRKGVEDCQKVLRARL 82


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