BLASTX nr result

ID: Coptis24_contig00012033 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00012033
         (1230 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI30297.3| unnamed protein product [Vitis vinifera]              222   2e-55
emb|CAN62761.1| hypothetical protein VITISV_021811 [Vitis vinifera]   219   1e-54
ref|XP_002528749.1| conserved hypothetical protein [Ricinus comm...   193   9e-47
ref|XP_002305863.1| predicted protein [Populus trichocarpa] gi|2...   177   5e-42
ref|XP_002301703.1| predicted protein [Populus trichocarpa] gi|2...   176   1e-41

>emb|CBI30297.3| unnamed protein product [Vitis vinifera]
          Length = 461

 Score =  222 bits (565), Expect = 2e-55
 Identities = 127/281 (45%), Positives = 175/281 (62%), Gaps = 21/281 (7%)
 Frame = -2

Query: 1229 TSLDYHRRDLATALGTTKWQLEDFERAVTLSA----SNVREDVLSRHRHFIRAIQDQVFQ 1062
            TS++YHRRDLAT L T KWQLEDFERAV+LSA    S +REDV+SRH+ FIRAI++Q+  
Sbjct: 52   TSIEYHRRDLATTLETAKWQLEDFERAVSLSAATDKSRMREDVISRHKQFIRAIREQIVH 111

Query: 1061 V-----------SQRNTHLINLNEKDQDGLALFLSAGNPVDPLTEYD-SDSSVMRRFLDS 918
            V           S RNT  INLNE+D+DGLALFLS  +P + +  Y+  DS+++RRFLD 
Sbjct: 112  VEKSLLDSSMGNSVRNTEWINLNEQDRDGLALFLSGQDPTEQVPRYEKEDSTILRRFLDP 171

Query: 917  TKPSGFN---DEIIELRTEEIEDPRENGVMHIDHSFDNIKENKLRKVASNYFTRPGFETV 747
               S +N   DEI+E +T E E+      MH+DH F + KE KLR V S+Y  +  FE  
Sbjct: 172  VTTSSYNDSTDEIVEQKTRESENLNMARAMHVDHDFKSSKEGKLRNVGSHYPAQLSFEAP 231

Query: 746  ISIEDSSKNTQG--GSWELENPDSNAKNIFSKNKLRGSRSRLDVFSFLGNMWYAYGDKMA 573
             +++D++    G  GSW+LE   +  K+ F K+  RG  +R+ +F FL N+W AYG +++
Sbjct: 232  EALQDTAGGKHGGDGSWDLEADGAKDKSFFHKDG-RGYHNRMGIFCFLANLWPAYGSRVS 290

Query: 572  KSFAKRRKDGEVIGDFDQNPSSSYADILQAEQGTYSWMGFA 450
            ++F KR KDGE     +Q+ S S  D+     G  + M  A
Sbjct: 291  RNFTKRLKDGE-----EQSHSPSQMDVSHGAPGHQARMRLA 326


>emb|CAN62761.1| hypothetical protein VITISV_021811 [Vitis vinifera]
          Length = 346

 Score =  219 bits (558), Expect = 1e-54
 Identities = 124/267 (46%), Positives = 170/267 (63%), Gaps = 21/267 (7%)
 Frame = -2

Query: 1229 TSLDYHRRDLATALGTTKWQLEDFERAVTLSA----SNVREDVLSRHRHFIRAIQDQVFQ 1062
            TS++YHRRDLAT L T KWQLEDFERAV+LSA    S +REDV+SRH+ FIRAI++Q+  
Sbjct: 52   TSIEYHRRDLATTLETAKWQLEDFERAVSLSAATDKSRMREDVISRHKQFIRAIREQIVH 111

Query: 1061 V-----------SQRNTHLINLNEKDQDGLALFLSAGNPVDPLTEYD-SDSSVMRRFLDS 918
            V           S RNT  INLNE+D+DGLALFLS  +P + +  Y+  DS+++RRFLD 
Sbjct: 112  VEKSLLDSSMGNSVRNTEWINLNEQDRDGLALFLSGQDPTEQVPRYEKEDSTILRRFLDP 171

Query: 917  TKPSGFN---DEIIELRTEEIEDPRENGVMHIDHSFDNIKENKLRKVASNYFTRPGFETV 747
               S +N   DEI+E +T E E+      MH+DH F + KE KLR V S+Y  +  FE  
Sbjct: 172  VTTSSYNDSTDEIVEQKTRESENLNMARAMHVDHDFKSSKEGKLRNVGSHYPAQLSFEAP 231

Query: 746  ISIEDSSKNTQGG--SWELENPDSNAKNIFSKNKLRGSRSRLDVFSFLGNMWYAYGDKMA 573
             ++ D++    GG  SW+LE   +  K+ F K+  RG  +R+ +F FL N+W AYG +++
Sbjct: 232  EALXDTAGGKHGGDXSWDLEADGAKDKSFFHKDG-RGYHNRMGIFCFLANLWPAYGSRVS 290

Query: 572  KSFAKRRKDGEVIGDFDQNPSSSYADI 492
            ++F KR KDGE     +Q+ S S  D+
Sbjct: 291  RNFTKRLKDGE-----EQSHSPSQMDV 312


>ref|XP_002528749.1| conserved hypothetical protein [Ricinus communis]
            gi|223531843|gb|EEF33661.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 380

 Score =  193 bits (490), Expect = 9e-47
 Identities = 122/272 (44%), Positives = 161/272 (59%), Gaps = 19/272 (6%)
 Frame = -2

Query: 1226 SLDYHRRDLATALGTTKWQLEDFERAVTLSA----SNVREDVLSRHRHFIRAIQDQVFQV 1059
            S++YHRRDLAT L T KWQLEDFERAV  SA    S  REDV+SRHR FIRAI++QV  V
Sbjct: 53   SIEYHRRDLATILETAKWQLEDFERAVHFSAVQDKSRSREDVISRHRQFIRAIREQVNHV 112

Query: 1058 -----------SQRNTHLINLNEKDQDGLALFLSAGNPVDPLTEYD-SDSSVMRRFLDST 915
                       S RNT   NLNE+D+DGLALFL  GN       Y+  DSS++RRFLD T
Sbjct: 113  ENSVAGPALGDSMRNTEWGNLNEQDRDGLALFLIGGNTAGHSNHYEMEDSSILRRFLDPT 172

Query: 914  KPSGFND-EIIELRTEEIEDPRENGVMHIDHSFDNIKENKLRKVASNYFTRPGFETVISI 738
              S   D EI+E  + E E  + +G +  D S    K++  +K+ S+Y TR G +    +
Sbjct: 173  SASSLTDNEIVEHGSVEFEKLKLSGNVQADDSAS--KDDYFKKLGSHYTTRLGSD----L 226

Query: 737  EDSSKNT--QGGSWELENPDSNAKNIFSKNKLRGSRSRLDVFSFLGNMWYAYGDKMAKSF 564
            +D S N    GG W+LE  ++  KN+F +N  R   SR++ F FL N+W  +G K+ KS+
Sbjct: 227  QDISCNRPGDGGHWDLEADEATPKNVFHENSSR--YSRMNFFGFLNNLWKMWGTKVTKSY 284

Query: 563  AKRRKDGEVIGDFDQNPSSSYADILQAEQGTY 468
             KR KDGE     +Q  S +Y D+  + QG +
Sbjct: 285  IKRLKDGE-----EQRHSPTYIDVSYSAQGQH 311


>ref|XP_002305863.1| predicted protein [Populus trichocarpa] gi|222848827|gb|EEE86374.1|
            predicted protein [Populus trichocarpa]
          Length = 317

 Score =  177 bits (449), Expect = 5e-42
 Identities = 102/249 (40%), Positives = 153/249 (61%), Gaps = 19/249 (7%)
 Frame = -2

Query: 1229 TSLDYHRRDLATALGTTKWQLEDFERA----VTLSASNVREDVLSRHRHFIRAIQDQVFQ 1062
            +S++YH+RDLAT LGT KWQLEDFERA    +  + S  REDV+SRHR FI AI++ + +
Sbjct: 52   SSIEYHKRDLATILGTAKWQLEDFERAANSSIIANKSQTREDVISRHRQFIMAIREHINE 111

Query: 1061 V-----------SQRNTHLINLNEKDQDGLALFLSAGNPVDPLTEYD-SDSSVMRRFLDS 918
            V           S RN+  +NLN+ ++D LA FL+ GNP + L  Y+  +S  +RRFLD 
Sbjct: 112  VEKGVKGPSMGDSMRNSEWVNLNDHERDLLASFLTGGNPKEHLNHYEMEESGYLRRFLDP 171

Query: 917  TKPSGFND-EIIELRTEEIEDPRENGVMHIDHSFDNIKENKLRKVASNYFTRPGFETVIS 741
               S   D EI+E  + E E  R NGV H +H  D+  E+K R + S+Y TR G + + S
Sbjct: 172  NLGSSLTDNEIVEHDSREFERVRINGVGHAEHYLDSANEDK-RNIGSHYTTRLGSDMMNS 230

Query: 740  IEDSSKNTQGGS--WELENPDSNAKNIFSKNKLRGSRSRLDVFSFLGNMWYAYGDKMAKS 567
            + ++S    GG   W+L+  ++ +++ F + K RG+ S +  F FL N+W  + +++A++
Sbjct: 231  LPENSHERHGGGDHWDLKANEAKSRSFFHEIKSRGTYS-IMFFGFLINLWSTHRNRIARN 289

Query: 566  FAKRRKDGE 540
            + KR KDGE
Sbjct: 290  YTKRLKDGE 298


>ref|XP_002301703.1| predicted protein [Populus trichocarpa] gi|222843429|gb|EEE80976.1|
            predicted protein [Populus trichocarpa]
          Length = 387

 Score =  176 bits (445), Expect = 1e-41
 Identities = 106/271 (39%), Positives = 159/271 (58%), Gaps = 19/271 (7%)
 Frame = -2

Query: 1229 TSLDYHRRDLATALGTTKWQLEDFERAVTLSA----SNVREDVLSRHRHFIRAIQDQVFQ 1062
            +S++YH+RDLAT LGT KWQLEDFERAV  S+    S  REDV+SRHR FI AI++ + +
Sbjct: 52   SSIEYHKRDLATILGTAKWQLEDFERAVNSSSIANKSQAREDVISRHRQFIIAIREHINE 111

Query: 1061 V-----------SQRNTHLINLNEKDQDGLALFLSAGNPVDPLTEYD-SDSSVMRRFLDS 918
            V           S RN+  +NLN++D+D LA FL+ GNP + +  Y+  +SS++RRFLD 
Sbjct: 112  VEKSVKGRSMDDSMRNSEWVNLNDQDRDVLASFLTGGNPTENMHPYEMEESSILRRFLDP 171

Query: 917  TKPSGFND-EIIELRTEEIEDPRENGVMHIDHSFDNIKENKLRKVASNYFTRPGFETVIS 741
                   D EI+E  + E E  +  GV H DH  D+  E+K R VAS+  T  G + + S
Sbjct: 172  NSGVSLKDNEIVEHDSREFERVKMTGVGHADHYLDSANEDK-RNVASHNSTGLGSDMMNS 230

Query: 740  IEDSSKNTQGGS--WELENPDSNAKNIFSKNKLRGSRSRLDVFSFLGNMWYAYGDKMAKS 567
             ++   +   G   W+LE  ++ +++ F + K RG  S +  F FL N+W A+ +++ ++
Sbjct: 231  RQEIHHDRHVGDDHWDLEANEAKSRSFFHEIKSRGIYSIMIFFGFLSNLWTAHRNRVGRN 290

Query: 566  FAKRRKDGEVIGDFDQNPSSSYADILQAEQG 474
            + KR KDGE     +   S +Y +   + QG
Sbjct: 291  YTKRLKDGE-----EYRHSPTYTESSHSAQG 316


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