BLASTX nr result
ID: Coptis24_contig00012030
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00012030 (1953 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002275393.1| PREDICTED: transcription factor bHLH144 isof... 208 4e-51 emb|CAN76054.1| hypothetical protein VITISV_036406 [Vitis vinifera] 208 4e-51 ref|XP_002519719.1| conserved hypothetical protein [Ricinus comm... 207 1e-50 gb|ACZ04445.1| bHLH1 transcription factor [Hevea brasiliensis] 191 8e-46 ref|XP_002316733.1| predicted protein [Populus trichocarpa] gi|2... 181 8e-43 >ref|XP_002275393.1| PREDICTED: transcription factor bHLH144 isoform 2 [Vitis vinifera] gi|225463440|ref|XP_002275365.1| PREDICTED: transcription factor bHLH144 isoform 1 [Vitis vinifera] Length = 244 Score = 208 bits (530), Expect = 4e-51 Identities = 119/241 (49%), Positives = 155/241 (64%), Gaps = 2/241 (0%) Frame = -2 Query: 1169 LMSDKQFFREKAVSPTRYQVGASYMNYGPVEHDLGPILPL-APDLRPFHGVEFQPSEVCP 993 + D+QF EK + P +VG YM PVE G + P A DL PFHGVEFQPS+VCP Sbjct: 1 MQRDQQFCPEKVMLPLANEVGNDYMYNTPVESAFGAVFPPGAKDLGPFHGVEFQPSDVCP 60 Query: 992 KNFIIFDQTNNRSRIMYHPALTPQKFNSPGIDMHAAFLEDNDTRKNTCTENAESSSFLKE 813 KNFIIFDQT++RS+IM+HPA+ QKFN P +++ A ++ +N ++ + E+SS LKE Sbjct: 61 KNFIIFDQTDHRSQIMFHPAIA-QKFNCPSLNLCATYIHNNLEKREINIDEGEASSALKE 119 Query: 812 DSKDIDALMS-XXXXXXXXXXEVVSTARTFGSYECGSPDSCSNFCSKSRKPRFXXXXXXX 636 DS+DIDAL+S E VSTART G+Y D+CS++ SK RK + Sbjct: 120 DSEDIDALLSLEEEDQEEYDEEEVSTARTHGNYGSNCEDTCSSYGSKPRKIKL-SSSILK 178 Query: 635 XXXXXXXXXXXKQRRRMKKMVKALRSIVPGADQMNTATVIDEAVTYLKSLKVEVKKHGLG 456 ++R++MKKMVKALR IVPG+ QMNT V+DEAV YLKSLKVEV+K G+ Sbjct: 179 SSSSGSSCNSERKRQKMKKMVKALRGIVPGSSQMNTVAVLDEAVRYLKSLKVEVQKLGVS 238 Query: 455 N 453 N Sbjct: 239 N 239 >emb|CAN76054.1| hypothetical protein VITISV_036406 [Vitis vinifera] Length = 289 Score = 208 bits (530), Expect = 4e-51 Identities = 119/241 (49%), Positives = 155/241 (64%), Gaps = 2/241 (0%) Frame = -2 Query: 1169 LMSDKQFFREKAVSPTRYQVGASYMNYGPVEHDLGPILPL-APDLRPFHGVEFQPSEVCP 993 + D+QF EK + P +VG YM PVE G + P A DL PFHGVEFQPS+VCP Sbjct: 46 MQRDQQFCPEKVMLPLANEVGNDYMYNTPVESAFGAVFPPGAKDLGPFHGVEFQPSDVCP 105 Query: 992 KNFIIFDQTNNRSRIMYHPALTPQKFNSPGIDMHAAFLEDNDTRKNTCTENAESSSFLKE 813 KNFIIFDQT++RS+IM+HPA+ QKFN P +++ A ++ +N ++ + E+SS LKE Sbjct: 106 KNFIIFDQTDHRSQIMFHPAIA-QKFNCPSLNLCATYIHNNLEKREINIDEGEASSALKE 164 Query: 812 DSKDIDALMS-XXXXXXXXXXEVVSTARTFGSYECGSPDSCSNFCSKSRKPRFXXXXXXX 636 DS+DIDAL+S E VSTART G+Y D+CS++ SK RK + Sbjct: 165 DSEDIDALLSLEEEDQEEYDEEEVSTARTHGNYGSNCEDTCSSYGSKPRKIKL-SSSILK 223 Query: 635 XXXXXXXXXXXKQRRRMKKMVKALRSIVPGADQMNTATVIDEAVTYLKSLKVEVKKHGLG 456 ++R++MKKMVKALR IVPG+ QMNT V+DEAV YLKSLKVEV+K G+ Sbjct: 224 SSSSGSSCNSERKRQKMKKMVKALRGIVPGSSQMNTVAVLDEAVRYLKSLKVEVQKLGVS 283 Query: 455 N 453 N Sbjct: 284 N 284 >ref|XP_002519719.1| conserved hypothetical protein [Ricinus communis] gi|223541136|gb|EEF42692.1| conserved hypothetical protein [Ricinus communis] Length = 239 Score = 207 bits (526), Expect = 1e-50 Identities = 124/244 (50%), Positives = 154/244 (63%), Gaps = 2/244 (0%) Frame = -2 Query: 1169 LMSDKQFFREKAVSPTRYQVGASYMNYGPVEHDLGPILPLAPD-LRPFHGVEFQPSEVCP 993 + SD+ F R+KAV Q G +YM+ PV P A L P HG+EFQPSEVCP Sbjct: 1 MQSDQHFRRKKAVPHFANQRGNNYMHV-PVASSFPAAPPTAAKHLMPVHGIEFQPSEVCP 59 Query: 992 KNFIIFDQTNNRSRIMYHPALTPQKFNSPGIDMHAAFLEDNDTRKNTCTENAESSSFLKE 813 KNFIIFDQT++RS+IM+HP + +FN PG++MHA++ ++N R+ E SS LKE Sbjct: 60 KNFIIFDQTDHRSQIMFHPTVA-HRFNGPGLNMHASYFQENYEREAVDDTGREMSS-LKE 117 Query: 812 DSKDIDALMSXXXXXXXXXXEV-VSTARTFGSYECGSPDSCSNFCSKSRKPRFXXXXXXX 636 DS DIDAL+S E VSTART+G+Y SPDSCS + SK RK Sbjct: 118 DSDDIDALLSLEEEEQDECDEEEVSTARTYGNYGSSSPDSCSTYGSKPRKT--GSSSVQK 175 Query: 635 XXXXXXXXXXXKQRRRMKKMVKALRSIVPGADQMNTATVIDEAVTYLKSLKVEVKKHGLG 456 ++R++MKKMVKALR IVPG DQMNT TV+DEAV YLKSLKVEV+K G+G Sbjct: 176 SPGSGSSCSTERKRQKMKKMVKALRGIVPGGDQMNTVTVLDEAVRYLKSLKVEVQKIGVG 235 Query: 455 NFSN 444 N N Sbjct: 236 NLKN 239 >gb|ACZ04445.1| bHLH1 transcription factor [Hevea brasiliensis] Length = 241 Score = 191 bits (484), Expect = 8e-46 Identities = 118/244 (48%), Positives = 146/244 (59%), Gaps = 2/244 (0%) Frame = -2 Query: 1169 LMSDKQFFREKAVSPTRYQVGASYMNYGPVEHDLGPILPLAPDLRPFHGVEFQPSEVCPK 990 + SD+QF KAV Q G +YM+ + P L P HG+EFQPSEVCPK Sbjct: 1 MQSDQQFQPNKAVPHFANQRGNNYMHIPVAPSFAAALPPTGKHLMPAHGIEFQPSEVCPK 60 Query: 989 NFIIFDQTNNRSRIMYHPALTPQKFNSPGIDMHAAFLEDN-DTRKNTCTENAESSSFLKE 813 NFIIFDQ ++RS+IM+HPA+ KF+ PG++M+ ++ +N D + E SSS LKE Sbjct: 61 NFIIFDQNDHRSQIMFHPAVA-HKFSGPGLNMYGSYNPENFDREEINGIEREVSSSSLKE 119 Query: 812 DSKDIDALMS-XXXXXXXXXXEVVSTARTFGSYECGSPDSCSNFCSKSRKPRFXXXXXXX 636 DS DIDAL+S E VSTART+G++ SPDS S SK K Sbjct: 120 DSDDIDALLSLEEDEQDEYDEEEVSTARTYGNHGSNSPDSYSTCGSKPWKN--GSSSIQN 177 Query: 635 XXXXXXXXXXXKQRRRMKKMVKALRSIVPGADQMNTATVIDEAVTYLKSLKVEVKKHGLG 456 ++R++MKKMVKALR IVPG DQMNT VIDEAV YLKSLKVEV+K G G Sbjct: 178 SSGNGSSINSERKRQKMKKMVKALRGIVPGGDQMNTVMVIDEAVRYLKSLKVEVQKIGAG 237 Query: 455 NFSN 444 NF N Sbjct: 238 NFKN 241 >ref|XP_002316733.1| predicted protein [Populus trichocarpa] gi|222859798|gb|EEE97345.1| predicted protein [Populus trichocarpa] Length = 227 Score = 181 bits (458), Expect = 8e-43 Identities = 107/230 (46%), Positives = 137/230 (59%), Gaps = 2/230 (0%) Frame = -2 Query: 1127 PTRYQVGASYMNYGPVEHDLGPILPLAPD-LRPFHGVEFQPSEVCPKNFIIFDQTNNRSR 951 P QV + M++ PV + PLA L P HG+EFQ SE+CP+NFIIFDQ ++RS+ Sbjct: 3 PLTNQVDNNNMHF-PVATTFAAVQPLAAKHLMPVHGIEFQSSEICPRNFIIFDQADHRSQ 61 Query: 950 IMYHPALTPQKFNSPGIDMHAAFLEDNDTRKNTCTENAESSSFLKEDSKDIDALMSXXXX 771 +MY+PA+ P ++HA ++++N R +T E SS LKEDS DIDALMS Sbjct: 62 VMYNPAVA-HNHGGPDFNIHATYIQENFERTDTYNVEREISSSLKEDSDDIDALMSLEEE 120 Query: 770 XXXXXXEV-VSTARTFGSYECGSPDSCSNFCSKSRKPRFXXXXXXXXXXXXXXXXXXKQR 594 VSTART +Y SPDSCS++ KP ++R Sbjct: 121 EPEECDGEEVSTARTCRNYGSSSPDSCSSY---GAKPMKNGSSVQKCSSSGSSSNSERKR 177 Query: 593 RRMKKMVKALRSIVPGADQMNTATVIDEAVTYLKSLKVEVKKHGLGNFSN 444 ++MK MVK LR IVPG DQMNT TV+DEAV YLKSLKVEV+K G+GNF N Sbjct: 178 QKMKTMVKTLRGIVPGGDQMNTVTVLDEAVRYLKSLKVEVQKLGVGNFKN 227