BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00012018
         (3154 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282919.1| PREDICTED: probable RNA helicase SDE3 [Vitis...  1203   0.0  
emb|CAN83068.1| hypothetical protein VITISV_014567 [Vitis vinifera]  1201   0.0  
ref|XP_002517101.1| ATP-dependent helicase NAM7, putative [Ricin...  1147   0.0  
ref|XP_002332671.1| hypothetical protein POPTRDRAFT_789212 [Popu...  1129   0.0  
gb|AAK40099.1|AF339908_1 RNA helicase SDE3 [Arabidopsis thaliana]    1129   0.0  

>ref|XP_002282919.1| PREDICTED: probable RNA helicase SDE3 [Vitis vinifera]
            gi|297737082|emb|CBI26283.3| unnamed protein product
            [Vitis vinifera]
          Length = 877

 Score = 1203 bits (3112), Expect = 0.0
 Identities = 592/880 (67%), Positives = 724/880 (82%), Gaps = 1/880 (0%)
 Frame = +3

Query: 66   TGWGSGSDDECSVIGDKGEIGFIDYQIDKSVCNYNPSEEGPVIISVPFPFASEKPQSVLV 245
            TGW    DDECSVIGDKGEIGFID++ D SVC+YNPSEEGPV++SVPF F   KP+S+ V
Sbjct: 4    TGW----DDECSVIGDKGEIGFIDFENDASVCDYNPSEEGPVVVSVPFAFKG-KPKSIFV 58

Query: 246  GETASDSVTINNTTSEPIDLWAVKIFCSNPEDSYTLSLMKPPSANSNIEDVDGFLETFAL 425
            GETA+D VT+ NTTSEP++LWAV+IF S PEDS+T+SLM+PPSA  +I+ +  FLE+F L
Sbjct: 59   GETATDCVTLENTTSEPVELWAVRIFASTPEDSFTVSLMEPPSAGVDIKYIQEFLESFCL 118

Query: 426  EDRVLQPYKTLTIWLSCKPKETGLHTTVVHFTVGEDTIERVVFLLVEDSISLSLASRKPY 605
            EDRVLQP +TLT+W+SCKPKE GLHT+VVHF +G D IERV+FLL ED +S SLA  KPY
Sbjct: 119  EDRVLQPGETLTVWVSCKPKEIGLHTSVVHFDLGSDRIERVIFLLAEDRVSQSLAPNKPY 178

Query: 606  SRPQRKNRFAVTEYVSGTRPARPGSQGFRYRLPQFNIPPETRELLESKQLPEVISDGLTR 785
            SR  RK  F V EYV G+RPARP ++ FRYRLPQ+ IP + REL+E KQ+P+ I +GLTR
Sbjct: 179  SRGSRKKVFNVQEYVVGSRPARPNTRSFRYRLPQYVIPNDVRELVEGKQIPDTILEGLTR 238

Query: 786  ESYGAFFSTLITMEELKLEEEMHRHDMECVTMRMR-RYFLALEVPGLAEKRPSLVIGDFV 962
            ++Y ++F TL+ MEE+++EE+M  +DME VTMR +   FL LEVPGLAEKRPSLV GD++
Sbjct: 239  DNYESYFKTLLIMEEIRMEEDMRSYDMERVTMRRKGTQFLTLEVPGLAEKRPSLVHGDYI 298

Query: 963  FAKHANGGPTDNTPAYQGFVHRVEADEVFLQFSKDFHLLHRDDNLYNIRFTYNRVNQRRL 1142
            FAK A     D +P YQGF+HRVEA++V+L F+K+F   H D++LYN+RFTYNRVN RRL
Sbjct: 299  FAKLAYEDENDLSPPYQGFIHRVEAEQVYLGFAKEFIWHHTDESLYNVRFTYNRVNMRRL 358

Query: 1143 YQAVQISEKLDDELLFPSQTIRRSIKAAPVVQLTRCLNMEQMTSVEMILGCKGAPPYVIH 1322
            YQA+  ++ L+ +LLFPS + RR IKA  +V ++  LN EQ+ S++MILGC+GAPPYVIH
Sbjct: 359  YQAIDSAKGLEMDLLFPSDSRRRLIKATHMVPISFNLNEEQIFSIKMILGCRGAPPYVIH 418

Query: 1323 GPPGTGKTLTLVEAMLQLYKTRNNTRILVCASSNSAADHILEKLINKEFVKVEESKIFRL 1502
            GPPGTGKT T+VEA+LQLY T+ NTRILVCA SNSAADH+LE+L+ ++ V+V+ ++IFRL
Sbjct: 419  GPPGTGKTKTMVEAILQLYLTQKNTRILVCAPSNSAADHLLERLLAEKAVEVQGNEIFRL 478

Query: 1503 NATSRPYEDVHPENIRFCYFQDYVFRCPPIKALMRYRIVISTYMSASLLYAEGIKQGHFS 1682
            NATSRPYED++P+ IRFC+ +D +F+CPP+  L RYRI+ISTYMSA+LLYAEG+K+ HFS
Sbjct: 479  NATSRPYEDMNPDFIRFCFSEDLIFKCPPLNDLKRYRIIISTYMSAALLYAEGVKRSHFS 538

Query: 1683 HIFLDEAGQASEPETMVPISNLCRRETVVVLAGDPMQLGPVIYSKDAETYGLGKSYLERL 1862
            HI LDEAGQASEPETM+P+S+LC+R+TVVVLAGDPMQLGPVIYSKDAETY LGKSYLERL
Sbjct: 539  HILLDEAGQASEPETMIPLSHLCQRKTVVVLAGDPMQLGPVIYSKDAETYCLGKSYLERL 598

Query: 1863 FECEFYHNEDENYVTKLVRNYRCHPAILELPSKLFYKGELIADKEEGDSSIDAYEDILPN 2042
            FECEFYH EDENYVTKLVRNYRCHP IL LPS+LFYKGELI  K++  SS+  + +ILPN
Sbjct: 599  FECEFYHKEDENYVTKLVRNYRCHPEILHLPSQLFYKGELIPCKDDKSSSM-TWAEILPN 657

Query: 2043 KKFPVLFIGIQGCDEREGNNPSWFNRIEASKVVEIIRKLRASADLNDSDIGVITPYRQQV 2222
            + FPVLFIG+QG DEREG+NPSWFNR EASKVVEII+KL  S DL + DIGVITPYRQQV
Sbjct: 658  RDFPVLFIGVQGYDEREGSNPSWFNRTEASKVVEIIKKLTISQDLREEDIGVITPYRQQV 717

Query: 2223 LKLKKILEDQLDMPDVKVGSVEQFQGQERQVIIISTVRSTVRHNEFDRVHYLGFLSNPRR 2402
            LKLKK LE  +DMP +KVGSVEQFQGQER+VIIISTVRST++HNEFD+ H LGFLSNPRR
Sbjct: 718  LKLKKALEG-VDMPAIKVGSVEQFQGQEREVIIISTVRSTIKHNEFDKNHCLGFLSNPRR 776

Query: 2403 FNVAITRARSLVVIIGNPHIITKDPYWDKLLRYCADNNSYQGCPLPERQEEIPEEDFPSS 2582
            FNVAITRA+SL++IIGNPHII+KD YW+K+L +C+DN+SYQGC LPERQ+ + +E  P  
Sbjct: 777  FNVAITRAKSLLIIIGNPHIISKDLYWNKILWHCSDNDSYQGCALPERQDFVDKE--PVQ 834

Query: 2583 QKLYHEQDNFQQSKEFELSSKSLNIAENPKGVCDVTEWSD 2702
                HE++N Q S E E   +     E PK V D  EWSD
Sbjct: 835  FSFNHEEENPQPSNEVERGEEPFQAEEIPKPVKDEAEWSD 874


>emb|CAN83068.1| hypothetical protein VITISV_014567 [Vitis vinifera]
          Length = 877

 Score = 1201 bits (3106), Expect = 0.0
 Identities = 592/880 (67%), Positives = 722/880 (82%), Gaps = 1/880 (0%)
 Frame = +3

Query: 66   TGWGSGSDDECSVIGDKGEIGFIDYQIDKSVCNYNPSEEGPVIISVPFPFASEKPQSVLV 245
            TGW    DDECSVIGDKGEIGFID++ D SVC+YNPSEEGPV++SVPF F   KP+S+ V
Sbjct: 4    TGW----DDECSVIGDKGEIGFIDFENDASVCDYNPSEEGPVVVSVPFAFKG-KPKSIFV 58

Query: 246  GETASDSVTINNTTSEPIDLWAVKIFCSNPEDSYTLSLMKPPSANSNIEDVDGFLETFAL 425
            GETA+D VT+ NTTSEP++LWAV+IF S PEDS+T+SLM+PPSA   I+ +  FLE+F L
Sbjct: 59   GETATDCVTLENTTSEPVELWAVRIFASTPEDSFTVSLMEPPSAGVXIKYIQEFLESFCL 118

Query: 426  EDRVLQPYKTLTIWLSCKPKETGLHTTVVHFTVGEDTIERVVFLLVEDSISLSLASRKPY 605
            EDRVLQP +TLT+W+SCKPKE GLHT+VVHF +G D IERV+FLL ED +S SLA  KPY
Sbjct: 119  EDRVLQPGETLTVWVSCKPKEIGLHTSVVHFDLGSDRIERVIFLLAEDRVSQSLAPNKPY 178

Query: 606  SRPQRKNRFAVTEYVSGTRPARPGSQGFRYRLPQFNIPPETRELLESKQLPEVISDGLTR 785
            SR  RK  F V EYV G+RPARP ++ FRYRLPQ+ IP + REL+E KQ+P+ I +GLTR
Sbjct: 179  SRGSRKKVFNVQEYVVGSRPARPNARSFRYRLPQYVIPNDVRELVEGKQIPDTILEGLTR 238

Query: 786  ESYGAFFSTLITMEELKLEEEMHRHDMECVTMRMR-RYFLALEVPGLAEKRPSLVIGDFV 962
            ++Y ++F TL+ MEE+++EE+M  +DME VTMR +   FL LEVPGLAEKRPSLV GD++
Sbjct: 239  DNYESYFKTLLIMEEIRMEEDMRSYDMERVTMRRKGTQFLTLEVPGLAEKRPSLVHGDYI 298

Query: 963  FAKHANGGPTDNTPAYQGFVHRVEADEVFLQFSKDFHLLHRDDNLYNIRFTYNRVNQRRL 1142
            FAK A     D++P YQGF+HRVEA++V+L F+++F   H D++LYN+RFTYNRVN RRL
Sbjct: 299  FAKLAYEDENDSSPPYQGFIHRVEAEQVYLGFAREFIWHHTDESLYNVRFTYNRVNMRRL 358

Query: 1143 YQAVQISEKLDDELLFPSQTIRRSIKAAPVVQLTRCLNMEQMTSVEMILGCKGAPPYVIH 1322
            YQA+  ++ L+ +LLFPS + RR IKA  +V ++  LN EQ+ S++MILGC+GAPPYVIH
Sbjct: 359  YQAIDSAKGLEMDLLFPSDSRRRLIKATHMVPISFNLNEEQIFSIKMILGCRGAPPYVIH 418

Query: 1323 GPPGTGKTLTLVEAMLQLYKTRNNTRILVCASSNSAADHILEKLINKEFVKVEESKIFRL 1502
            GPPGTGKT TLVEA+LQLY T+ NTRILVCA SNSAADH+LE+L+ ++ V+V+ ++IFRL
Sbjct: 419  GPPGTGKTKTLVEAILQLYLTQKNTRILVCAPSNSAADHLLERLLAEKAVEVQGNEIFRL 478

Query: 1503 NATSRPYEDVHPENIRFCYFQDYVFRCPPIKALMRYRIVISTYMSASLLYAEGIKQGHFS 1682
            NATSRPYED++P+ IRFC  +D +F+CPP+  L RYRI+ISTYMSA+LLYAEG+K+ HFS
Sbjct: 479  NATSRPYEDMNPDFIRFCISEDLIFKCPPLNDLKRYRIIISTYMSAALLYAEGVKRSHFS 538

Query: 1683 HIFLDEAGQASEPETMVPISNLCRRETVVVLAGDPMQLGPVIYSKDAETYGLGKSYLERL 1862
            HI LDEAGQASEPETM+P+S+LC+R+TVVVLAGDPMQLGPVIYSKDAETY LGKSYLERL
Sbjct: 539  HILLDEAGQASEPETMIPLSHLCQRKTVVVLAGDPMQLGPVIYSKDAETYCLGKSYLERL 598

Query: 1863 FECEFYHNEDENYVTKLVRNYRCHPAILELPSKLFYKGELIADKEEGDSSIDAYEDILPN 2042
            FECEFYH EDENYVTKLVRNYRCHP IL LPS+LFYKGELI  K+   SS+  + +ILPN
Sbjct: 599  FECEFYHKEDENYVTKLVRNYRCHPEILHLPSQLFYKGELIPCKDXKSSSM-TWAEILPN 657

Query: 2043 KKFPVLFIGIQGCDEREGNNPSWFNRIEASKVVEIIRKLRASADLNDSDIGVITPYRQQV 2222
            + FPVLFIG+QG DEREG+NPSWFNR EASKVVEII+KL  S DL + DIGVITPYRQQV
Sbjct: 658  RDFPVLFIGVQGYDEREGSNPSWFNRTEASKVVEIIKKLTISQDLREEDIGVITPYRQQV 717

Query: 2223 LKLKKILEDQLDMPDVKVGSVEQFQGQERQVIIISTVRSTVRHNEFDRVHYLGFLSNPRR 2402
            LKLKK LE  +DMP +KVGSVEQFQGQER+VIIISTVRST++HNEFD+ H LGFLSNPRR
Sbjct: 718  LKLKKALEG-VDMPAIKVGSVEQFQGQEREVIIISTVRSTIKHNEFDKNHCLGFLSNPRR 776

Query: 2403 FNVAITRARSLVVIIGNPHIITKDPYWDKLLRYCADNNSYQGCPLPERQEEIPEEDFPSS 2582
            FNVAITRA+SL++IIGNPHII+KD YW+K+L +C+DN+SYQGC LPERQ+ + +E  P  
Sbjct: 777  FNVAITRAKSLLIIIGNPHIISKDLYWNKILWHCSDNDSYQGCALPERQDFVDKE--PVQ 834

Query: 2583 QKLYHEQDNFQQSKEFELSSKSLNIAENPKGVCDVTEWSD 2702
                HE++N Q S E E   +     E PK V D  EWSD
Sbjct: 835  FSFNHEEENPQPSNEVERGEEPFQAEEIPKPVKDEAEWSD 874


>ref|XP_002517101.1| ATP-dependent helicase NAM7, putative [Ricinus communis]
            gi|223543736|gb|EEF45264.1| ATP-dependent helicase NAM7,
            putative [Ricinus communis]
          Length = 882

 Score = 1147 bits (2966), Expect = 0.0
 Identities = 574/884 (64%), Positives = 691/884 (78%), Gaps = 3/884 (0%)
 Frame = +3

Query: 60   MGTGWGSGSDDECSVIGDKGEIGFIDYQIDKSVCNYNPSEEGPVIISVPFPFASEKPQSV 239
            MGT  G   DDE SVIGDKGEIGFIDYQ DKSVC+Y+P EEGP+ ISVPFPF + KPQSV
Sbjct: 1    MGTIEGKWDDDEYSVIGDKGEIGFIDYQDDKSVCSYDPIEEGPIFISVPFPFENGKPQSV 60

Query: 240  LVGETASDSVTINNTTSEPIDLWAVKIFCSNPEDSYTLSLMKPPSANSNIEDVDGFLETF 419
            ++GETASDS+TI NTT E +DLWA KI+ SNP +S+TLSLM+PPSAN       GFLE+F
Sbjct: 61   VLGETASDSITIKNTTDEAVDLWA-KIYASNPNNSFTLSLMEPPSANGG-NSSRGFLESF 118

Query: 420  ALEDRVLQPYKTLTIWLSCKPKETGLHTTVVHFTVGEDTIERVVFLLVEDSISLSLASRK 599
             LEDR+LQ   +LT+WL+CKP+E GL+TTVV+F VG D IERVVFLL ED IS SLAS+K
Sbjct: 119  NLEDRMLQAGDSLTVWLNCKPQEIGLYTTVVYFDVGSDRIERVVFLLAEDKISRSLASKK 178

Query: 600  PYSRPQRKNRFAVTEYVSGTRPARPGSQGFRYRLPQFNIPPETRELLESKQLPEVISDGL 779
            PYSR +R  +F V  YV+G+RP R      + RLP+++IP E REL+ESKQ P+ ++ GL
Sbjct: 179  PYSRTRRTKQFTVDTYVAGSRPMRKAGWALKNRLPRYDIPMEVRELIESKQTPDAVTGGL 238

Query: 780  TRESYGAFFSTLITMEELKLEEEMHRHDMECVTMRMRRYFLALEVPGLAEKRPSLVIGDF 959
            TRE+Y ++F TL+ MEE+ +EE+M  +DME V MR     LAL VPGLAE+RPSLV GD+
Sbjct: 239  TRENYASYFKTLLIMEEIHMEEDMRSYDMEGVRMRRMGNVLALMVPGLAERRPSLVYGDY 298

Query: 960  VFAKHANGGPTDNTPAYQGFVHRVEADEVFLQFSKDFHLLHRDDNLYNIRFTYNRVNQRR 1139
            +F K AN   T  T  YQG++HRVEADEV L+F   FH  H D NLY++ FTYNRVN RR
Sbjct: 299  IFVKLANVDKT--TQPYQGYIHRVEADEVHLKFDPQFHTCHSDGNLYDVHFTYNRVNIRR 356

Query: 1140 LYQAVQISEKLDDELLFPSQTI-RRSIKAAPVVQLTRCLNMEQMTSVEMILGCKGAPPYV 1316
             YQAV  +E L+ ELLFPS+    R  + AP+V +T  LN EQM S+EMILGCK APPY+
Sbjct: 357  QYQAVDAAENLEMELLFPSECFGNRLTETAPLVPITCNLNEEQMCSIEMILGCKRAPPYI 416

Query: 1317 IHGPPGTGKTLTLVEAMLQLYKTRNNTRILVCASSNSAADHILEKLINKEFVKVEESKIF 1496
            I+GPPGTGKT+T+VEA+LQLYK R +TRILVCA SNSAADH+LEKL+ ++   + +++IF
Sbjct: 417  IYGPPGTGKTMTIVEAILQLYKNRKDTRILVCAPSNSAADHLLEKLLREKAANIRQNEIF 476

Query: 1497 RLNATSRPYEDVHPENIRFCYFQDYVFRCPPIKALMRYRIVISTYMSASLLYAEGIKQGH 1676
            RLNATSRP+ D+  + IRFC+F + +F+CPP+ AL RYRI+IST+MSA  LYAEG+++GH
Sbjct: 477  RLNATSRPFGDIKSDYIRFCFFDELLFKCPPLSALRRYRIIISTFMSACYLYAEGVERGH 536

Query: 1677 FSHIFLDEAGQASEPETMVPISNLCRRETVVVLAGDPMQLGPVIYSKDAETYGLGKSYLE 1856
            FSHIFLDEAGQASEPE+M+P+SNLC R+TVVVLAGDP QLGPVIYS+DA   GL KSYLE
Sbjct: 537  FSHIFLDEAGQASEPESMIPLSNLCGRDTVVVLAGDPKQLGPVIYSRDAGDLGLQKSYLE 596

Query: 1857 RLFECEFYHNEDENYVTKLVRNYRCHPAILELPSKLFYKGELIADKEEGDSSIDAYE--D 2030
            RLFECE Y N DENY+TKLVRNYRCHP IL+LPS+LFY+GELIA KE  D +I      +
Sbjct: 597  RLFECECYCNGDENYITKLVRNYRCHPEILKLPSELFYEGELIASKESNDDTISLLSSVN 656

Query: 2031 ILPNKKFPVLFIGIQGCDEREGNNPSWFNRIEASKVVEIIRKLRASADLNDSDIGVITPY 2210
            +LP ++FPVLF GIQGCDEREGNNPSWFNRIEASKVVEII KL A  +LN+ DIGVITPY
Sbjct: 657  LLPGREFPVLFFGIQGCDEREGNNPSWFNRIEASKVVEIINKLIAGGNLNEVDIGVITPY 716

Query: 2211 RQQVLKLKKILEDQLDMPDVKVGSVEQFQGQERQVIIISTVRSTVRHNEFDRVHYLGFLS 2390
            RQQVLKLKK  +D LDMPD+KVGSVEQFQGQER+VI+ISTVRSTV+HN+FDR H LGFLS
Sbjct: 717  RQQVLKLKKAFDD-LDMPDIKVGSVEQFQGQERKVIVISTVRSTVKHNDFDRAHCLGFLS 775

Query: 2391 NPRRFNVAITRARSLVVIIGNPHIITKDPYWDKLLRYCADNNSYQGCPLPERQEEIPEED 2570
            NP+RFNVAITRA SL+++IGNPHI+ KDP+W KLL YCAD+ SYQGC LPE +E + E  
Sbjct: 776  NPKRFNVAITRAMSLLILIGNPHIVNKDPHWSKLLWYCADHESYQGCGLPEGEEYVEEYQ 835

Query: 2571 FPSSQKLYHEQDNFQQSKEFELSSKSLNIAENPKGVCDVTEWSD 2702
                   Y   +   QS E    ++    AE PK V D TEWSD
Sbjct: 836  IQDDGANYDYYNGNPQSTEEHGWNQDYCQAETPKPVTDETEWSD 879


>ref|XP_002332671.1| hypothetical protein POPTRDRAFT_789212 [Populus trichocarpa]
            gi|222836465|gb|EEE74872.1| hypothetical protein
            POPTRDRAFT_789212 [Populus trichocarpa]
          Length = 894

 Score = 1129 bits (2921), Expect = 0.0
 Identities = 563/894 (62%), Positives = 707/894 (79%), Gaps = 17/894 (1%)
 Frame = +3

Query: 72   WGSGSDDECSVIGDKGEIGFIDYQIDKSVCNYNPSEEGPVIISVPFPFASEKPQSVLVGE 251
            WG    DECSVIGDKGEI +IDYQ DKSVC+Y+PSEEGP++IS PFPF   KP+SV VGE
Sbjct: 8    WG----DECSVIGDKGEIEYIDYQNDKSVCSYDPSEEGPIVISAPFPFEEGKPRSVFVGE 63

Query: 252  TASDSVTINNTTSEPIDLWAVKIFCSNPEDSYTLSLMKPPSANSNIEDVDGFLETFALED 431
            TA DS+TI NTT+E +DLW  KI+ S PEDS+ LSLMKPPSAN +++  +GF++   +ED
Sbjct: 64   TAIDSITIKNTTAEAVDLWT-KIYASTPEDSFKLSLMKPPSAN-DVKCQEGFMDFSVMED 121

Query: 432  RVLQPYKTLTIWLSCKPKETGLHTTVVHFTVGEDTIERVVFLLVEDSISLSLASRKPYSR 611
            R+LQP ++LTIWLSCKPKE GL+TTVVHF VG D IERV FLL +D+IS SLAS+KP+SR
Sbjct: 122  RMLQPGESLTIWLSCKPKELGLYTTVVHFDVGNDRIERVAFLLADDNISQSLASKKPFSR 181

Query: 612  PQRKNRFAVTEYVS-GTRPARPGSQGFRYRLPQFNIPPETRELLESKQLPEVISDGLTRE 788
             QRK +F+   +VS G+RPAR   + ++ RLP+++IP + R L+E KQ+P+VI  GLT +
Sbjct: 182  GQRKKKFSTDTFVSAGSRPARAPGRAYKNRLPRYDIPKDIRALIERKQIPDVIMGGLTID 241

Query: 789  SYGAFFSTLITMEELKLEEEMHRHDMECVTMRMRRYFLALEVPGLAEKRPSLVIGDFVFA 968
            +Y ++F TL+ MEE++LEE+M  HDMECVTMR +  +L+L VPGLAE+RPSLV GD +F 
Sbjct: 242  NYASYFKTLLIMEEIQLEEDMRSHDMECVTMRRKGNYLSLVVPGLAERRPSLVQGDDIFV 301

Query: 969  KHANGGPTDNTPAYQGFVHRVEADEVFLQFSKDFHLLHRDDNLYNIRFTYNRVNQRRLYQ 1148
            K A+    D T  YQG+++RVEADEV+L+F ++FH  H D +LYN+ F YNRV+ RRLYQ
Sbjct: 302  KLADAD--DTTTPYQGYIYRVEADEVYLKFYQEFHSCHNDGHLYNVHFKYNRVSMRRLYQ 359

Query: 1149 AVQISEKLDDELLFPSQTI-RRSIKAAPVVQLTRCLNMEQMTSVEMILGCKGAPPYVIHG 1325
            A+  ++ L+ E+LFPS+T   R I+ + +V ++  LN EQ+ SVEMILGCKG PPYVI+G
Sbjct: 360  AIDAAKDLETEMLFPSETSGSRLIETSTLVPISCSLNEEQICSVEMILGCKGGPPYVIYG 419

Query: 1326 PPGTGKTLTLVEAMLQLYKTRNNTRILVCASSNSAADHILEKLINKEFVKVEESKIFRLN 1505
            PPGTGKT+T++EA+LQLY+ R + RILVCA SNSAADH+LEKL+++E V ++E +IFRLN
Sbjct: 420  PPGTGKTMTIIEAILQLYQNRKHARILVCAPSNSAADHLLEKLLSEEAVHIQEKEIFRLN 479

Query: 1506 ATSRPYEDVHPENIRFCYFQDYVFRCPPIKALMRYRIVISTYMSASLLYAEGIKQGHFSH 1685
            ATSRP++D+ P+ IRFC F +++F CPP+ AL RYRI+ISTYMSASLL AEG+K+G FSH
Sbjct: 480  ATSRPFDDIKPDLIRFCLFDEHIFTCPPLGALTRYRIIISTYMSASLLNAEGVKRGQFSH 539

Query: 1686 IFLDEAGQASEPETMVPISNLCRRETVVVLAGDPMQLGPVIYSKDAETYGLGKSYLERLF 1865
            IFLDEAGQASEPE+M+ +SN C R+TVVVLAGDPMQLGPVI+S+DAE+YGLGKSYLERLF
Sbjct: 540  IFLDEAGQASEPESMISVSNFCNRDTVVVLAGDPMQLGPVIFSRDAESYGLGKSYLERLF 599

Query: 1866 ECEFYHNEDENYVTKLVRNYRCHPAILELPSKLFYKGELIADKEEGD--SSIDAYEDILP 2039
            ECE Y + DENYVTKL+RNYRCHP IL LPS LFY+GELIA KE  D  +S+    ++LP
Sbjct: 600  ECESYDSGDENYVTKLIRNYRCHPEILHLPSTLFYEGELIACKESNDDSTSLMTLTNLLP 659

Query: 2040 NKKFPVLFIGIQGCDEREGNNPSWFNRIEASKVVEIIRKLRASADLNDSDIGVITPYRQQ 2219
             K FPVLF GIQGCDERE NNPSWFNRIEASKVVEI++KL    +L+DSDIGVITPYRQQ
Sbjct: 660  GKNFPVLFFGIQGCDEREANNPSWFNRIEASKVVEIVKKLATRGNLSDSDIGVITPYRQQ 719

Query: 2220 VLKLKKILEDQLDMPDVKVGSVEQFQGQERQVIIISTVRSTVRHNEFDRVHYLGFLSNPR 2399
            VLKLKK L D +DMPD+KVGSVEQFQGQER+VII+STVRST++HN+FDRVH LGFLSNPR
Sbjct: 720  VLKLKKAL-DNIDMPDIKVGSVEQFQGQERKVIIVSTVRSTIKHNDFDRVHCLGFLSNPR 778

Query: 2400 RFNVAITRARSLVVIIGNPHIITKDPYWDKLLRYCADNNSYQGCPLPERQEEIPEEDFPS 2579
            RFNVAITRA SL++I GNPHII+KD YW+KLL +C DN+SYQGC LPE++ E   +++P+
Sbjct: 779  RFNVAITRAISLLIITGNPHIISKDQYWNKLLWHCVDNDSYQGCALPEKRLEC-VDNYPT 837

Query: 2580 SQKLYHEQ-----------DNFQQSKEFEL--SSKSLNIAENPKGVCDVTEWSD 2702
             +                 D +Q S   E+       + A+ P+ V D  EWSD
Sbjct: 838  YEDRVDYDGGPVTNEADWCDGWQPSSSGEVGWDHPGSSQAQIPEPVTDEAEWSD 891


>gb|AAK40099.1|AF339908_1 RNA helicase SDE3 [Arabidopsis thaliana]
          Length = 1002

 Score = 1129 bits (2920), Expect = 0.0
 Identities = 590/1015 (58%), Positives = 733/1015 (72%), Gaps = 42/1015 (4%)
 Frame = +3

Query: 75   GSGSDDECSVIGDKGEIGFIDYQIDKSVCNYNPSEEGPVIISVPFPFASEKPQSVLVGET 254
            G  SDDE SVI DKGEIGFIDYQ D S   YNP +EGPV++SVPFPF  EKPQSV VGET
Sbjct: 5    GYKSDDEYSVIADKGEIGFIDYQNDGSSGCYNPFDEGPVVVSVPFPFKKEKPQSVTVGET 64

Query: 255  ASDSVTINNTTSEPIDLWAVKIFCSNPEDSYTLSLMKPPSANSNIEDVDGFLETFALEDR 434
            + DS T+ NT  EP+DLW  KI+ SNPEDS+TLS++KPPS +S++++   F ETF LEDR
Sbjct: 65   SFDSFTVKNTMDEPVDLWT-KIYASNPEDSFTLSILKPPSKDSDLKERQCFYETFTLEDR 123

Query: 435  VLQPYKTLTIWLSCKPKETGLHTTVVHFTVGEDTIERVVFLLVEDSISLSLASRKPYSRP 614
            +L+P  TLTIW+SCKPK+ GLHTTVV    G D +ERVVFLL ED IS SL S +PYSR 
Sbjct: 124  MLEPGDTLTIWVSCKPKDIGLHTTVVTVDWGSDRVERVVFLLAEDKISSSLTSNRPYSRS 183

Query: 615  QR--KNRFAVTEYVSGTRPARPGSQGFRYRLPQFNIPPETRELLESKQLPEVISDGLTRE 788
            +R  K  FAV +YV G+RP++   + FR RLP + IP E RE++E+K+ P+ +++GLT  
Sbjct: 184  RRAPKKDFAVDDYVKGSRPSKVVERSFRNRLPLYEIPKEIREMIENKEFPDDLNEGLTAR 243

Query: 789  SYGAFFSTLITMEELKLEEEMHRHDMECVTMRMRRYFLALEVPGLAEKRPSLVIGDFVFA 968
            +Y  ++ TL+ MEEL+LEE+M  +DME V+M+ R  +L+LEVPGLAE+RPSLV GDF+F 
Sbjct: 244  NYANYYKTLLIMEELQLEEDMRAYDMENVSMKRRGIYLSLEVPGLAERRPSLVHGDFIFV 303

Query: 969  KHANGGPTDNTPAYQGFVHRVEADEVFLQFSKDFHLLHRDDNLYNIRFTYNRVNQRRLYQ 1148
            +HA    TD+  AYQGFVHRVEADEV L+F+ +FH  H   ++YN+RFTYNR+N RRLYQ
Sbjct: 304  RHAYDDGTDH--AYQGFVHRVEADEVHLKFASEFHQRHTAGSVYNVRFTYNRINTRRLYQ 361

Query: 1149 AVQISEKLDDELLFPS-QTIRRSIKAAPVVQLTRCLNMEQMTSVEMILGCKGAPPYVIHG 1325
            AV  +E LD   LFPS  + +R IK  P V ++  LN EQ+ S+EM+LGCKGAPPYVIHG
Sbjct: 362  AVDAAEMLDPNFLFPSLHSGKRMIKTKPFVPISPALNAEQICSIEMVLGCKGAPPYVIHG 421

Query: 1326 PPGTGKTLTLVEAMLQLYKTRNNTRILVCASSNSAADHILEKLINKEFVKVEESKIFRLN 1505
            PPGTGKT+TLVEA++QLY T+ N R+LVCA SNSAADHILEKL+  E V++++++IFRLN
Sbjct: 422  PPGTGKTMTLVEAIVQLYTTQRNARVLVCAPSNSAADHILEKLLCLEGVRIKDNEIFRLN 481

Query: 1506 ATSRPYEDVHPENIRFCYFQDYVFRCPPIKALMRYRIVISTYMSASLLYAEGIKQGHFSH 1685
            A +R YE++ PE IRFC+F + +F+CPP+KAL RY++V+STYMSASLL AEG+K+GHF+H
Sbjct: 482  AATRSYEEIKPEIIRFCFFDELIFKCPPLKALTRYKLVVSTYMSASLLNAEGVKRGHFTH 541

Query: 1686 IFLDEAGQASEPETMVPISNLCRRETVVVLAGDPMQLGPVIYSKDAETYGLGKSYLERLF 1865
            I LDEAGQASEPE M+ +SNLC  ETVVVLAGDP QLGPVIYS+DAE+ GLGKSYLERLF
Sbjct: 542  ILLDEAGQASEPENMIAVSNLCLTETVVVLAGDPRQLGPVIYSRDAESLGLGKSYLERLF 601

Query: 1866 ECEFYHNEDENYVTKLVRNYRCHPAILELPSKLFYKGELIADKEEGDSSIDAYEDILPNK 2045
            EC++Y   DENYVTKLV+NYRCHP IL+LPSKLFY GEL+A KEE DS + A  + LPNK
Sbjct: 602  ECDYYCEGDENYVTKLVKNYRCHPEILDLPSKLFYDGELVASKEETDSVL-ASLNFLPNK 660

Query: 2046 KFPVLFIGIQGCDEREGNNPSWFNRIEASKVVEIIRKLRASADLNDSDIGVITPYRQQVL 2225
            +FP++F GIQGCDEREGNNPSWFNRIE SKV+E I++L A+  + + DIGVITPYRQQV+
Sbjct: 661  EFPMVFYGIQGCDEREGNNPSWFNRIEISKVIETIKRLTANDCVQEEDIGVITPYRQQVM 720

Query: 2226 KLKKILEDQLDMPDVKVGSVEQFQGQERQVIIISTVRSTVRHNEFDRVHYLGFLSNPRRF 2405
            K+K++L D+LDM +VKVGSVEQFQGQE+QVIIISTVRST++HNEFDR + LGFLSNPRRF
Sbjct: 721  KIKEVL-DRLDMTEVKVGSVEQFQGQEKQVIIISTVRSTIKHNEFDRAYCLGFLSNPRRF 779

Query: 2406 NVAITRARSLVVIIGNPHIITKDPYWDKLLRYCADNNSYQGCPLPERQEEIPEEDF---- 2573
            NVAITRA SL+VIIGNPHII KD  W+KLL  C DNN+YQGC LPE QEE  EE F    
Sbjct: 780  NVAITRAISLLVIIGNPHIICKDMNWNKLLWRCVDNNAYQGCGLPE-QEEFVEEPFKQEG 838

Query: 2574 PSSQKLYHEQDNFQQSKEFELSSKSLNIA-----ENPKGVCDVTEWSDDCRSTETPVPQH 2738
             S+   Y  +  +  S E      + N        N  G  +  EWSD   S      + 
Sbjct: 839  SSNGPQYPPEAEWNNSGELNNGGANENGEWSDGWNNNGGTKEKNEWSDGWNSNGGGTKKK 898

Query: 2739 NQAIWSDSWK------------PTEAPM--PVADW--------------DEHSDGWNSR- 2831
            ++  WSD W              + AP     A+W              D  SDGWN+  
Sbjct: 899  DE--WSDGWDNNGGTNGINQEGSSNAPQDPQEAEWNDSGEVKNGGTKEKDVRSDGWNNNG 956

Query: 2832 -EISKPECDWAKRSDDWKSPDIPMPVTNEAESDPWMSGEIPEPEYDQDKWSDGWK 2993
             +  K EC      D WK       + N  + +    G+    E  +D+WSDGWK
Sbjct: 957  GKNEKEEC-----CDGWKDGGSGEEIKNGGKFE--TRGDFVGKE--EDEWSDGWK 1002