BLASTX nr result

ID: Coptis24_contig00012014 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00012014
         (250 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003601619.1| Phytoene synthase [Medicago truncatula] gi|3...   100   2e-19
emb|CAC19567.1| phytoene synthase [Helianthus annuus]                 100   2e-19
emb|CAC27383.1| phytoene synthase [Helianthus annuus]                 100   2e-19
ref|XP_003552764.1| PREDICTED: phytoene synthase, chloroplastic-...    99   3e-19
gb|AAM45379.1| phytoene synthase [Tagetes erecta]                      98   6e-19

>ref|XP_003601619.1| Phytoene synthase [Medicago truncatula] gi|355490667|gb|AES71870.1|
           Phytoene synthase [Medicago truncatula]
          Length = 387

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 50/85 (58%), Positives = 62/85 (72%), Gaps = 3/85 (3%)
 Frame = -3

Query: 248 PFKDLIDGMRMDITKCRYENFEELYQYCYHVAVAPGLMVVPSVELQPE---PLRKLYDTV 78
           PF+D+I+GMRMD  K RY+NFEELY YCY+VA   GLM VP + + PE   P + +Y + 
Sbjct: 184 PFRDMIEGMRMDTRKSRYKNFEELYLYCYYVAGTVGLMSVPVMGIAPESLIPAQSVYKSA 243

Query: 77  LYVCIAVQITNILRDVKEDALMGRV 3
           LY+ I  Q+TNILRDV EDAL GRV
Sbjct: 244 LYLGIGNQLTNILRDVGEDALRGRV 268


>emb|CAC19567.1| phytoene synthase [Helianthus annuus]
          Length = 414

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 51/85 (60%), Positives = 61/85 (71%), Gaps = 3/85 (3%)
 Frame = -3

Query: 248 PFKDLIDGMRMDITKCRYENFEELYQYCYHVAVAPGLMVVPSVELQPE---PLRKLYDTV 78
           PFKD+IDGMRMD+ K RYENF+ELY YCY+VA   GLM VP + + PE   P   +Y+  
Sbjct: 215 PFKDMIDGMRMDLRKSRYENFDELYLYCYYVAGTVGLMSVPIMGIAPESNAPTESVYNAA 274

Query: 77  LYVCIAVQITNILRDVKEDALMGRV 3
           L + IA Q+TNILRDV EDA  GRV
Sbjct: 275 LALGIANQLTNILRDVGEDARRGRV 299


>emb|CAC27383.1| phytoene synthase [Helianthus annuus]
          Length = 414

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 51/85 (60%), Positives = 61/85 (71%), Gaps = 3/85 (3%)
 Frame = -3

Query: 248 PFKDLIDGMRMDITKCRYENFEELYQYCYHVAVAPGLMVVPSVELQPE---PLRKLYDTV 78
           PFKD+IDGMRMD+ K RYENF+ELY YCY+VA   GLM VP + + PE   P   +Y+  
Sbjct: 215 PFKDMIDGMRMDLRKSRYENFDELYLYCYYVAGTVGLMSVPIMGIAPESNAPTESVYNAA 274

Query: 77  LYVCIAVQITNILRDVKEDALMGRV 3
           L + IA Q+TNILRDV EDA  GRV
Sbjct: 275 LALGIANQLTNILRDVGEDARRGRV 299


>ref|XP_003552764.1| PREDICTED: phytoene synthase, chloroplastic-like [Glycine max]
          Length = 397

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 49/85 (57%), Positives = 60/85 (70%), Gaps = 3/85 (3%)
 Frame = -3

Query: 248 PFKDLIDGMRMDITKCRYENFEELYQYCYHVAVAPGLMVVPSVELQPE---PLRKLYDTV 78
           PFKD+I GMRMD  K RY NF+ELY YCY+VA   GLM VP + +  E   P++ +YD  
Sbjct: 195 PFKDMIQGMRMDTRKARYNNFQELYLYCYYVAGTVGLMTVPIMGIAQESVIPVQSVYDAA 254

Query: 77  LYVCIAVQITNILRDVKEDALMGRV 3
           LY+ +  Q+TNILRDV EDAL GRV
Sbjct: 255 LYLGVGNQLTNILRDVGEDALRGRV 279


>gb|AAM45379.1| phytoene synthase [Tagetes erecta]
          Length = 399

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 50/85 (58%), Positives = 61/85 (71%), Gaps = 3/85 (3%)
 Frame = -3

Query: 248 PFKDLIDGMRMDITKCRYENFEELYQYCYHVAVAPGLMVVPSVELQPE---PLRKLYDTV 78
           PFKD+IDGMRMD+ K RY+NF+ELY YCY+VA   GLM VP + + PE   P   +Y+  
Sbjct: 200 PFKDMIDGMRMDLRKSRYQNFDELYLYCYYVAGTVGLMSVPIMGIAPESNAPTESVYNAA 259

Query: 77  LYVCIAVQITNILRDVKEDALMGRV 3
           L + IA Q+TNILRDV EDA  GRV
Sbjct: 260 LGLGIANQLTNILRDVGEDARRGRV 284


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