BLASTX nr result

ID: Coptis24_contig00012013 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00012013
         (1406 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268178.1| PREDICTED: homeobox-leucine zipper protein H...   317   6e-84
emb|CBI32169.3| unnamed protein product [Vitis vinifera]              315   2e-83
ref|XP_002275747.1| PREDICTED: homeobox-leucine zipper protein H...   315   2e-83
ref|XP_002534537.1| Homeobox-leucine zipper protein HAT14, putat...   298   3e-78
ref|XP_003531416.1| PREDICTED: homeobox-leucine zipper protein H...   277   5e-72

>ref|XP_002268178.1| PREDICTED: homeobox-leucine zipper protein HAT14-like [Vitis
            vinifera]
          Length = 358

 Score =  317 bits (811), Expect = 6e-84
 Identities = 191/377 (50%), Positives = 223/377 (59%), Gaps = 17/377 (4%)
 Frame = +2

Query: 50   MELGLSLGESSRTSFTFLDKGNTNKMNNKGFGFCMGLGLSSTLNASEAXXXXXXXXXXXX 229
            MEL LSLG++S   F F++K +  ++ NKG GF MGLGL S     E             
Sbjct: 1    MELELSLGDASSKPFAFMEKAH-RQVANKGLGFSMGLGLGSAGRDQEEQKIHEVADDDDD 59

Query: 230  XXXXXVSAEC-----IVTQXXXXXXXXXXXXXRNNSS-QGLPWLSENGNSEAGSTGQLGG 391
                    +       +               RN +S QGL W S+NG+SEAGS+G +G 
Sbjct: 60   DDDGEDDDDGRDQRPSMGLPLQLDLLPLAPVPRNQASHQGLTWPSDNGSSEAGSSGNVGL 119

Query: 392  SVRGFDVNMFPST-------EDVEDGAAV---SSPNSTVSSFQIDFNIYKSGSGN-KRDS 538
              RG DVN  PST       E+VEDGAA    SSPNS  SSFQ+DF IY+ G+G  KRD 
Sbjct: 120  PARGLDVNRLPSTAVTAAAGEEVEDGAAAEVESSPNSAASSFQMDFCIYRGGNGGTKRDF 179

Query: 539  ETAGLNDVDAERTSSRASDDDENGSSRKKLRLSKEQSAYLEDSFKEHNTLNPXXXXXXXX 718
            E+      +AERTSSRASD+D+NG +RKKLRLSKEQSA+LE+SFKEHNTLNP        
Sbjct: 180  ESG-----EAERTSSRASDEDDNGLTRKKLRLSKEQSAFLEESFKEHNTLNPKQKLALAK 234

Query: 719  XXSLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCDTLNEENRRLQKEISELRALKTSH 898
              +LRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCC+TL EENRRL KE+ ELRALKTS+
Sbjct: 235  QLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCETLTEENRRLHKELQELRALKTSN 294

Query: 899  PFYMQLPATTLTMCPSCERVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPIASAFS 1078
            PFYMQLPATTLTMCPSCERV                                    +  +
Sbjct: 295  PFYMQLPATTLTMCPSCERV-------------AATSTAPSAAASTATTATDPSTTTTTT 341

Query: 1079 LTKPRFYPFVHPHPHQS 1129
              +PRFYPF H  P  S
Sbjct: 342  ANRPRFYPFSHQPPGAS 358


>emb|CBI32169.3| unnamed protein product [Vitis vinifera]
          Length = 357

 Score =  315 bits (807), Expect = 2e-83
 Identities = 182/320 (56%), Positives = 211/320 (65%), Gaps = 17/320 (5%)
 Frame = +2

Query: 50  MELGLSLGESSRTSFTFLDKGNTNKMNNKGFGFCMGLGLSSTLNASEAXXXXXXXXXXXX 229
           MEL LSLG++S   F F++K +  ++ NKG GF MGLGL S     E             
Sbjct: 1   MELELSLGDASSKPFAFMEKAH-RQVANKGLGFSMGLGLGSAGRDQEEQKIHEVADDDDD 59

Query: 230 XXXXXVSAEC-----IVTQXXXXXXXXXXXXXRNNSS-QGLPWLSENGNSEAGSTGQLGG 391
                   +       +               RN +S QGL W S+NG+SEAGS+G +G 
Sbjct: 60  DDDGEDDDDGRDQRPSMGLPLQLDLLPLAPVPRNQASHQGLTWPSDNGSSEAGSSGNVGL 119

Query: 392 SVRGFDVNMFPST-------EDVEDGAAV---SSPNSTVSSFQIDFNIYKSGSGN-KRDS 538
             RG DVN  PST       E+VEDGAA    SSPNS  SSFQ+DF IY+ G+G  KRD 
Sbjct: 120 PARGLDVNRLPSTAVTAAAGEEVEDGAAAEVESSPNSAASSFQMDFCIYRGGNGGTKRDF 179

Query: 539 ETAGLNDVDAERTSSRASDDDENGSSRKKLRLSKEQSAYLEDSFKEHNTLNPXXXXXXXX 718
           E+      +AERTSSRASD+D+NG +RKKLRLSKEQSA+LE+SFKEHNTLNP        
Sbjct: 180 ESG-----EAERTSSRASDEDDNGLTRKKLRLSKEQSAFLEESFKEHNTLNPKQKLALAK 234

Query: 719 XXSLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCDTLNEENRRLQKEISELRALKTSH 898
             +LRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCC+TL EENRRL KE+ ELRALKTS+
Sbjct: 235 QLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCETLTEENRRLHKELQELRALKTSN 294

Query: 899 PFYMQLPATTLTMCPSCERV 958
           PFYMQLPATTLTMCPSCERV
Sbjct: 295 PFYMQLPATTLTMCPSCERV 314


>ref|XP_002275747.1| PREDICTED: homeobox-leucine zipper protein HAT14-like [Vitis
            vinifera]
          Length = 331

 Score =  315 bits (806), Expect = 2e-83
 Identities = 194/370 (52%), Positives = 229/370 (61%), Gaps = 8/370 (2%)
 Frame = +2

Query: 50   MELGLSLGESSRTSFTFLDKGNTNKMNNKGFGFCMGLGLSSTLNASEAXXXXXXXXXXXX 229
            MEL LSLG++S+  FTFLDK  T KM NK  GFCMGLG                      
Sbjct: 1    MELALSLGDASKP-FTFLDK--TQKMVNKDAGFCMGLGTG---------IIGKGQGHGGE 48

Query: 230  XXXXXVSAECIVTQXXXXXXXXXXXXXRNNSSQGL--PWLSENGNSEAGSTGQLGGSVRG 403
                 VS++  V               R++ S  L  PWL++N  SE GS+    GS R 
Sbjct: 49   EDERKVSSDPPVQ----LDLLPFSPVPRHHPSSQLRFPWLADNLMSEPGSSD---GSGRA 101

Query: 404  FDVNMFP----STEDVEDGAAVSSPNSTVSSFQIDFNIYKSGSG--NKRDSETAGLNDVD 565
             DVN FP    + ED +DG A+SSPNSTVSSFQ+DF+IY+SG+G  +KRD E A +N+V+
Sbjct: 102  LDVNRFPVAVAAAEDADDGGALSSPNSTVSSFQMDFSIYRSGNGGRSKRDLE-ATVNEVE 160

Query: 566  AERTSSRASDDDENGSSRKKLRLSKEQSAYLEDSFKEHNTLNPXXXXXXXXXXSLRPRQV 745
                +SRASDDDENGS+RKKLRLSKEQSA+LE+SFKEHNTLNP          +LRPRQV
Sbjct: 161  ----TSRASDDDENGSTRKKLRLSKEQSAFLEESFKEHNTLNPKQKLALAKQLNLRPRQV 216

Query: 746  EVWFQNRRARTKLKQTEVDCEYLKRCCDTLNEENRRLQKEISELRALKTSHPFYMQLPAT 925
            EVWFQNRRARTKLKQTEVDCEYLKRCC+TL EENRRLQKE+ ELRALKTS PFYMQLPAT
Sbjct: 217  EVWFQNRRARTKLKQTEVDCEYLKRCCETLTEENRRLQKELQELRALKTSQPFYMQLPAT 276

Query: 926  TLTMCPSCERVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPIASAFSLTKPRFYPF 1105
            TLTMCPSCERV                                 P +++ +L + R +PF
Sbjct: 277  TLTMCPSCERV--------------------ATTSTSSSAAAAAPTSTSATLARTRLFPF 316

Query: 1106 VHPHPHQSAA 1135
               H HQ+ A
Sbjct: 317  SQAHVHQAPA 326


>ref|XP_002534537.1| Homeobox-leucine zipper protein HAT14, putative [Ricinus communis]
           gi|223525092|gb|EEF27847.1| Homeobox-leucine zipper
           protein HAT14, putative [Ricinus communis]
          Length = 368

 Score =  298 bits (762), Expect = 3e-78
 Identities = 178/309 (57%), Positives = 196/309 (63%), Gaps = 6/309 (1%)
 Frame = +2

Query: 50  MELGLSLGESSRTSFTFLDKG---NTNKMNNKGFGFCMGLGLSSTLNASE-AXXXXXXXX 217
           MEL LSLG++S+  F FLD     N   + NK  GFCMGL  S     S+          
Sbjct: 1   MELALSLGDASKP-FKFLDNTTPKNNKMIPNKDLGFCMGLATSGFAPRSQDKTHDHSHEG 59

Query: 218 XXXXXXXXXVSAECIVTQXXXXXXXXXXXXXRNNSSQGLPWLSENGNSEAGSTGQLGGSV 397
                    V +     Q             R       PWLS+N  SE GST   GG  
Sbjct: 60  DDDDGDRRRVLSSDRPVQLDLLPFSPVHPARRQIP---FPWLSDNMVSEPGSTDGSGGD- 115

Query: 398 RGFDVNMFPSTEDVEDGAAVSSPNSTVSSFQIDFNIYKSG--SGNKRDSETAGLNDVDAE 571
           RGFDVN   S E+ E+GA +SSPNS  SSFQ+DF I  SG   GNKRD E       +AE
Sbjct: 116 RGFDVNRL-SVEEAEEGATLSSPNSAASSFQMDFGIRSSGIGRGNKRDMEC-----FEAE 169

Query: 572 RTSSRASDDDENGSSRKKLRLSKEQSAYLEDSFKEHNTLNPXXXXXXXXXXSLRPRQVEV 751
           R SSRASDDDENG +RKKLRLSKEQSA+LE+SFKEHNTLNP          +LRPRQVEV
Sbjct: 170 RGSSRASDDDENGLTRKKLRLSKEQSAFLEESFKEHNTLNPKQKLALAKQLNLRPRQVEV 229

Query: 752 WFQNRRARTKLKQTEVDCEYLKRCCDTLNEENRRLQKEISELRALKTSHPFYMQLPATTL 931
           WFQNRRARTKLKQTEVDCEYLKRCC+ L EENRRLQKE+ ELRALKTS PFYMQLPATTL
Sbjct: 230 WFQNRRARTKLKQTEVDCEYLKRCCEMLTEENRRLQKELQELRALKTSQPFYMQLPATTL 289

Query: 932 TMCPSCERV 958
           TMCPSCERV
Sbjct: 290 TMCPSCERV 298


>ref|XP_003531416.1| PREDICTED: homeobox-leucine zipper protein HOX27-like [Glycine max]
          Length = 377

 Score =  277 bits (708), Expect = 5e-72
 Identities = 178/387 (45%), Positives = 208/387 (53%), Gaps = 25/387 (6%)
 Frame = +2

Query: 50   MELGLSLGESSRTSFTFLDKGNTNKMNNKGFGFCMGLGLSSTLNASEAXXXXXXXXXXXX 229
            MELGLSLG+SSR    F++K      N  G GF   L +   +   +             
Sbjct: 1    MELGLSLGDSSRPLLGFMEKPREATSNQLGLGFNTTLSIGPIITRQKDHQQDEDEEYQDE 60

Query: 230  XXXXXVSAECIVTQXXXXXXXXXXXXXRNNS---------SQGLPWLSENGNSEAGSTGQ 382
                  +     T+              NN+            LPW   + N    S  +
Sbjct: 61   ETKPNNNNNTHRTEDPNDLCSKP----NNNTVLHQLDFLPQLALPWHPPSENGSLSS--E 114

Query: 383  LGGSVRGFDVNMFPSTEDVEDGAAVSSPNSTVSSFQIDFNIYKS--GSGNKRDSETAGLN 556
            LGGS RG DVN+ P   + ++ A  SSPNS  SSFQ+D  IY S  GS NKRD E    +
Sbjct: 115  LGGSSRGLDVNVQPPAAE-DEAARSSSPNSAASSFQMDLCIYNSRGGSSNKRDFEGEAYD 173

Query: 557  DVDAERTSSRASDDDEN----GSSRKKLRLSKEQSAYLEDSFKEHNTLNPXXXXXXXXXX 724
                +RTSSRASDDD+N    G++RKKLRLSKEQSA+LE+SFKEHNTLNP          
Sbjct: 174  ----QRTSSRASDDDDNNGSGGNTRKKLRLSKEQSAFLEESFKEHNTLNPKQKLALAKQL 229

Query: 725  SLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCDTLNEENRRLQKEISELRALKTSHPF 904
            +L+PRQVEVWFQNRRARTKLKQTEVDCEYLKRCC+TL EENRRL KE+ ELRALKTS+PF
Sbjct: 230  NLQPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCETLTEENRRLHKELQELRALKTSNPF 289

Query: 905  YMQLPATTLTMCPSCERVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPIAS----- 1069
            YMQLPATTLTMCPSCERV                                    S     
Sbjct: 290  YMQLPATTLTMCPSCERVATNSTSTSSSMSATINATNSGATACVKTGNNNNNNDSPSKPI 349

Query: 1070 AFSLTKPRFYPFVHP-----HPHQSAA 1135
             F   KPRF+PFVH      H HQS+A
Sbjct: 350  GFPFGKPRFHPFVHSSQQQLHQHQSSA 376


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