BLASTX nr result

ID: Coptis24_contig00012009 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00012009
         (603 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002520690.1| serine endopeptidase degp2, putative [Ricinu...   209   3e-52
emb|CBI32271.3| unnamed protein product [Vitis vinifera]              206   3e-51
ref|XP_002270247.1| PREDICTED: protease Do-like 2, chloroplastic...   206   3e-51
ref|XP_002321037.1| predicted protein [Populus trichocarpa] gi|2...   204   7e-51
ref|XP_004148888.1| PREDICTED: protease Do-like 2, chloroplastic...   201   6e-50

>ref|XP_002520690.1| serine endopeptidase degp2, putative [Ricinus communis]
           gi|223540075|gb|EEF41652.1| serine endopeptidase degp2,
           putative [Ricinus communis]
          Length = 621

 Score =  209 bits (532), Expect = 3e-52
 Identities = 111/201 (55%), Positives = 139/201 (69%), Gaps = 9/201 (4%)
 Frame = -3

Query: 577 FKCKETTPSH---------SSSSLFTFNFPTCKKTNTSVFSKRKDFLRRNSSSIGKTKDE 425
           F+C  T+  H         +SS     +    K+ ++S   K  +  R N+   GK  + 
Sbjct: 19  FRCYVTSQRHFATSHHRSLTSSKAINHSGRNSKRGSSSSIDKSNN--RNNAKLKGKRSNL 76

Query: 424 IEAVPQKRLKDDKQQSSVFKSLGTSQKKEKKGFLYDLKESQVDSEVLQAATFMNAVVKVY 245
                  + +  K QS  +KS GT ++K+KK F +D  E Q++S  LQ   F+NAVVKVY
Sbjct: 77  YSDENGGKAERGKAQSVAYKSFGT-ERKDKKEFQFDSNELQIESGKLQDMAFLNAVVKVY 135

Query: 244 CTHTAPDYSLPWQKQRQFTSTGSAFMIGDGKLLTNAHCVEHYTQVKLKRRGDDTKFVAKV 65
           CTHTAPDYSLPWQKQRQ+TSTGSAFMIGDGKLLTNAHCVEHYTQVK+KRRGDDTK+VAKV
Sbjct: 136 CTHTAPDYSLPWQKQRQYTSTGSAFMIGDGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKV 195

Query: 64  LARGVECDIALLSVENEEFWK 2
           LARGV+CDIALLSV+++EFW+
Sbjct: 196 LARGVDCDIALLSVKDKEFWE 216


>emb|CBI32271.3| unnamed protein product [Vitis vinifera]
          Length = 612

 Score =  206 bits (524), Expect = 3e-51
 Identities = 105/136 (77%), Positives = 119/136 (87%), Gaps = 4/136 (2%)
 Frame = -3

Query: 397 KDDKQ--QSSVFKSLGT-SQKKEKKGFLYDLKESQ-VDSEVLQAATFMNAVVKVYCTHTA 230
           +D+K+  QSS FKS G  SQ+K+KKG   DLKE Q V++  LQ   F+NAVVKVYCTHTA
Sbjct: 67  EDEKRRTQSSPFKSFGAQSQRKDKKGVSSDLKEQQQVETGNLQDGAFLNAVVKVYCTHTA 126

Query: 229 PDYSLPWQKQRQFTSTGSAFMIGDGKLLTNAHCVEHYTQVKLKRRGDDTKFVAKVLARGV 50
           PDYSLPWQKQRQ+TSTGSAF+IGDGKLLTNAHCVEH TQVK+KRRGDDTK+VAKVLARG+
Sbjct: 127 PDYSLPWQKQRQYTSTGSAFIIGDGKLLTNAHCVEHATQVKVKRRGDDTKYVAKVLARGI 186

Query: 49  ECDIALLSVENEEFWK 2
           ECDIALLSVE+EEFWK
Sbjct: 187 ECDIALLSVESEEFWK 202


>ref|XP_002270247.1| PREDICTED: protease Do-like 2, chloroplastic-like [Vitis vinifera]
          Length = 606

 Score =  206 bits (524), Expect = 3e-51
 Identities = 105/136 (77%), Positives = 119/136 (87%), Gaps = 4/136 (2%)
 Frame = -3

Query: 397 KDDKQ--QSSVFKSLGT-SQKKEKKGFLYDLKESQ-VDSEVLQAATFMNAVVKVYCTHTA 230
           +D+K+  QSS FKS G  SQ+K+KKG   DLKE Q V++  LQ   F+NAVVKVYCTHTA
Sbjct: 67  EDEKRRTQSSPFKSFGAQSQRKDKKGVSSDLKEQQQVETGNLQDGAFLNAVVKVYCTHTA 126

Query: 229 PDYSLPWQKQRQFTSTGSAFMIGDGKLLTNAHCVEHYTQVKLKRRGDDTKFVAKVLARGV 50
           PDYSLPWQKQRQ+TSTGSAF+IGDGKLLTNAHCVEH TQVK+KRRGDDTK+VAKVLARG+
Sbjct: 127 PDYSLPWQKQRQYTSTGSAFIIGDGKLLTNAHCVEHATQVKVKRRGDDTKYVAKVLARGI 186

Query: 49  ECDIALLSVENEEFWK 2
           ECDIALLSVE+EEFWK
Sbjct: 187 ECDIALLSVESEEFWK 202


>ref|XP_002321037.1| predicted protein [Populus trichocarpa] gi|222861810|gb|EEE99352.1|
           predicted protein [Populus trichocarpa]
          Length = 592

 Score =  204 bits (520), Expect = 7e-51
 Identities = 102/156 (65%), Positives = 126/156 (80%), Gaps = 7/156 (4%)
 Frame = -3

Query: 448 SIGKTKDEIEAVPQK-------RLKDDKQQSSVFKSLGTSQKKEKKGFLYDLKESQVDSE 290
           S GK+KD+  ++  +       +    K QS  FKS G +Q+K+KK F +D+KE Q + +
Sbjct: 63  SPGKSKDKRSSLHDEDDDGISGKRNAGKSQSMAFKSFG-AQRKDKKEFKFDMKEQQFEPQ 121

Query: 289 VLQAATFMNAVVKVYCTHTAPDYSLPWQKQRQFTSTGSAFMIGDGKLLTNAHCVEHYTQV 110
            L+ A F++AVVKVYCTHT PDYSLPWQKQRQ+TSTGSAFMIG+GKLLTNAHCVE+YTQV
Sbjct: 122 NLKDAAFLDAVVKVYCTHTEPDYSLPWQKQRQYTSTGSAFMIGNGKLLTNAHCVEYYTQV 181

Query: 109 KLKRRGDDTKFVAKVLARGVECDIALLSVENEEFWK 2
           K+KRRGDDTK+VAKVLARGV+CDIALLSVE+EEFW+
Sbjct: 182 KVKRRGDDTKYVAKVLARGVDCDIALLSVESEEFWE 217


>ref|XP_004148888.1| PREDICTED: protease Do-like 2, chloroplastic-like [Cucumis sativus]
           gi|449491511|ref|XP_004158921.1| PREDICTED: protease
           Do-like 2, chloroplastic-like [Cucumis sativus]
          Length = 623

 Score =  201 bits (512), Expect = 6e-50
 Identities = 109/169 (64%), Positives = 128/169 (75%), Gaps = 8/169 (4%)
 Frame = -3

Query: 484 SKRKDFLRRNSSSIGKTKDEIEA-VPQKRLKDD-------KQQSSVFKSLGTSQKKEKKG 329
           SKR+  L  +SS  G    E E+ +P    +D+       + Q+  +KS G  +K +K+ 
Sbjct: 54  SKRRSSLAASSS--GNFDGEKESGIPLLHRRDNSAQRNSGRVQTEAYKSFGMQRKDKKE- 110

Query: 328 FLYDLKESQVDSEVLQAATFMNAVVKVYCTHTAPDYSLPWQKQRQFTSTGSAFMIGDGKL 149
            L +  E QV+S  LQ A F+NAVVKVYCTHTAPDYSLPWQKQRQFTSTGSAFMIGDGKL
Sbjct: 111 -LVNAIEDQVESGNLQGAAFLNAVVKVYCTHTAPDYSLPWQKQRQFTSTGSAFMIGDGKL 169

Query: 148 LTNAHCVEHYTQVKLKRRGDDTKFVAKVLARGVECDIALLSVENEEFWK 2
           LTNAHCVEH TQVK+K+RGDDTK+VAKVLARGV+CDIALLSVENEEFWK
Sbjct: 170 LTNAHCVEHDTQVKVKKRGDDTKYVAKVLARGVDCDIALLSVENEEFWK 218


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