BLASTX nr result
ID: Coptis24_contig00011999
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00011999
(854 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002524430.1| conserved hypothetical protein [Ricinus comm... 265 1e-68
ref|XP_003634155.1| PREDICTED: protein NDR1 [Vitis vinifera] 263 5e-68
gb|ABU43058.1| NDR1/HIN1-like protein [Vitis vinifera] 260 2e-67
ref|XP_002318501.1| predicted protein [Populus trichocarpa] gi|2... 257 2e-66
ref|XP_002321350.1| predicted protein [Populus trichocarpa] gi|2... 250 3e-64
>ref|XP_002524430.1| conserved hypothetical protein [Ricinus communis]
gi|223536314|gb|EEF37965.1| conserved hypothetical
protein [Ricinus communis]
Length = 212
Score = 265 bits (676), Expect = 1e-68
Identities = 135/210 (64%), Positives = 162/210 (77%), Gaps = 4/210 (1%)
Frame = -2
Query: 772 MSEFVVKSPKHCAKQG--FYGNKLNKKLLYAISTFXXXXXXXXXXXXXXLHPSKPEFFLR 599
MS+ +++SPKHCAK+G NKL KKLL+ S L P+KPEF L+
Sbjct: 1 MSQVLIESPKHCAKKGRITIDNKLYKKLLFVFSASFTTILSLILIIWLILRPTKPEFSLK 60
Query: 598 EANLYQLNLSGPHLLNSSIQITVVSKNPNQKVGIYYDQLQLYASYKGQQITTEASLPPFY 419
EA++YQLN+SGP+LLNSSIQ+T++SKNPN KVGIYYD+LQ YA+YKGQQIT + +LPPFY
Sbjct: 61 EADVYQLNISGPNLLNSSIQLTLLSKNPNDKVGIYYDELQAYAAYKGQQITVDTTLPPFY 120
Query: 418 QGHQDDNILTALLIGSFLPVASSFGDEVSRDQNTGTLVLSLKVNGRLRWKVGTWVSSRYR 239
QGHQD N+LTA LIGS LPVASSFG EV RDQ G LVLSLKVNGR+RWKVG WVS RYR
Sbjct: 121 QGHQDSNLLTASLIGSGLPVASSFGYEVGRDQTVGKLVLSLKVNGRIRWKVGIWVSGRYR 180
Query: 238 LNVDCVTVMAF-PN-SFGPLNSKKVIQCST 155
+NV+C+ V+AF PN GPL+SK+ QCST
Sbjct: 181 INVNCIAVVAFGPNLPTGPLSSKQAAQCST 210
>ref|XP_003634155.1| PREDICTED: protein NDR1 [Vitis vinifera]
Length = 210
Score = 263 bits (671), Expect = 5e-68
Identities = 133/208 (63%), Positives = 159/208 (76%), Gaps = 2/208 (0%)
Frame = -2
Query: 772 MSEFVVKSPKHCAKQGFYGNKLNKKLLYAISTFXXXXXXXXXXXXXXLHPSKPEFFLREA 593
MS+ KSPKHCA +G +K KKL ++ TF LHP+KPEF L+EA
Sbjct: 1 MSKVDSKSPKHCADKGLNIDKFYKKLYWSGFTFLFSVLSLILLVWLILHPTKPEFSLKEA 60
Query: 592 NLYQLNLSGPHLLNSSIQITVVSKNPNQKVGIYYDQLQLYASYKGQQITTEASLPPFYQG 413
++YQLNLSGPHLLNSSIQ+T++SKNPN KVGIYYD +Q+YASYKGQQIT + SLPPFYQG
Sbjct: 61 DIYQLNLSGPHLLNSSIQLTLLSKNPNTKVGIYYDMVQVYASYKGQQITVDTSLPPFYQG 120
Query: 412 HQDDNILTALLIGSFLPVASSFGDEVSRDQNTGTLVLSLKVNGRLRWKVGTWVSSRYRLN 233
H++ N+LTA L+G+ LPVA SFG EV RDQ G LVLSLK++GR+RWKVGTWVS RYRLN
Sbjct: 121 HEESNLLTASLVGTALPVAPSFGYEVGRDQTAGKLVLSLKLDGRVRWKVGTWVSGRYRLN 180
Query: 232 VDCVTVMAFPNSF--GPLNSKKVIQCST 155
V+CV VMAF S GPL+SK+ QCST
Sbjct: 181 VNCVAVMAFGPSIPSGPLSSKEGTQCST 208
>gb|ABU43058.1| NDR1/HIN1-like protein [Vitis vinifera]
Length = 210
Score = 260 bits (665), Expect = 2e-67
Identities = 132/208 (63%), Positives = 158/208 (75%), Gaps = 2/208 (0%)
Frame = -2
Query: 772 MSEFVVKSPKHCAKQGFYGNKLNKKLLYAISTFXXXXXXXXXXXXXXLHPSKPEFFLREA 593
MS+ KSPKHCA +G +K KKL ++ TF LHP+KPEF L+EA
Sbjct: 1 MSKVDSKSPKHCADKGLNIDKFYKKLYWSGFTFLFSVLSLILLVWLILHPTKPEFSLKEA 60
Query: 592 NLYQLNLSGPHLLNSSIQITVVSKNPNQKVGIYYDQLQLYASYKGQQITTEASLPPFYQG 413
++YQLNLSGPHLLNSSIQ+T++SKNPN KVGIYYD +Q+YASYKGQQIT + SLPPFYQG
Sbjct: 61 DIYQLNLSGPHLLNSSIQLTLLSKNPNTKVGIYYDMVQVYASYKGQQITVDTSLPPFYQG 120
Query: 412 HQDDNILTALLIGSFLPVASSFGDEVSRDQNTGTLVLSLKVNGRLRWKVGTWVSSRYRLN 233
H++ N+LTA L+G+ LPVA SFG EV RDQ G LVLSLK++GR+RWKVGTWVS RYRLN
Sbjct: 121 HEESNLLTASLVGTALPVAPSFGYEVGRDQTAGKLVLSLKLDGRVRWKVGTWVSGRYRLN 180
Query: 232 VDCVTVMAFPNSF--GPLNSKKVIQCST 155
V+CV V AF S GPL+SK+ QCST
Sbjct: 181 VNCVAVKAFGPSIPSGPLSSKEGTQCST 208
>ref|XP_002318501.1| predicted protein [Populus trichocarpa] gi|222859174|gb|EEE96721.1|
predicted protein [Populus trichocarpa]
Length = 210
Score = 257 bits (657), Expect = 2e-66
Identities = 127/208 (61%), Positives = 159/208 (76%), Gaps = 2/208 (0%)
Frame = -2
Query: 772 MSEFVVKSPKHCAKQGFYGNKLNKKLLYAISTFXXXXXXXXXXXXXXLHPSKPEFFLREA 593
MS ++SPKHCAKQG NKL+KKL +A S F L P+KPEF L+EA
Sbjct: 1 MSLVSIESPKHCAKQGLNVNKLSKKLFFASSAFFTTLLSLILIIWLILRPAKPEFSLKEA 60
Query: 592 NLYQLNLSGPHLLNSSIQITVVSKNPNQKVGIYYDQLQLYASYKGQQITTEASLPPFYQG 413
++YQL+LS P+LLNSSIQ+T++SKNPNQKVG+YYD+LQ+YA+Y+GQQIT ++ LPPFYQG
Sbjct: 61 DIYQLSLSAPNLLNSSIQLTLLSKNPNQKVGVYYDELQVYAAYRGQQITVDSPLPPFYQG 120
Query: 412 HQDDNILTALLIGSFLPVASSFGDEVSRDQNTGTLVLSLKVNGRLRWKVGTWVSSRYRLN 233
HQD N+LTA L+G+ LPVA SF EV RDQ G LVL+L+VNGR+RWKVGTWVS RYR+N
Sbjct: 121 HQDSNLLTASLVGTGLPVAPSFNYEVGRDQTAGKLVLNLRVNGRIRWKVGTWVSGRYRIN 180
Query: 232 VDCVTVMAFPNSF--GPLNSKKVIQCST 155
V+C+ VMA + GPL+SK+ CST
Sbjct: 181 VNCLAVMALGPTLPTGPLSSKQGTACST 208
>ref|XP_002321350.1| predicted protein [Populus trichocarpa] gi|222868346|gb|EEF05477.1|
predicted protein [Populus trichocarpa]
Length = 210
Score = 250 bits (638), Expect = 3e-64
Identities = 125/208 (60%), Positives = 156/208 (75%), Gaps = 2/208 (0%)
Frame = -2
Query: 772 MSEFVVKSPKHCAKQGFYGNKLNKKLLYAISTFXXXXXXXXXXXXXXLHPSKPEFFLREA 593
MS+ +KSPKHCAKQG +KL KKL +A S L P+KPEF L+EA
Sbjct: 1 MSQVSIKSPKHCAKQGLNFDKLYKKLFFAFSGIFTTLLLLILMIWLILRPAKPEFTLKEA 60
Query: 592 NLYQLNLSGPHLLNSSIQITVVSKNPNQKVGIYYDQLQLYASYKGQQITTEASLPPFYQG 413
++YQL+LSGP+LLNSSIQ+T++SKNPNQKV IYYD+LQ+YA+YKGQQIT + +PPFYQG
Sbjct: 61 DIYQLSLSGPNLLNSSIQLTLLSKNPNQKVSIYYDELQVYAAYKGQQITVDTFVPPFYQG 120
Query: 412 HQDDNILTALLIGSFLPVASSFGDEVSRDQNTGTLVLSLKVNGRLRWKVGTWVSSRYRLN 233
HQD N+LTA L+G+ LPVA SF EV RD+ G LVL+LKVNGR+RWKVGTWVS YR+N
Sbjct: 121 HQDSNLLTASLVGTGLPVAPSFNYEVGRDRTAGKLVLNLKVNGRIRWKVGTWVSGPYRIN 180
Query: 232 VDCVTVMAFPNSF--GPLNSKKVIQCST 155
V+C+ VMA + GPL+S++ CST
Sbjct: 181 VNCLAVMALGPTLPTGPLSSRQGTICST 208