BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00011997
         (200 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003606390.1| DEAD-box ATP-dependent RNA helicase [Medicag...    49   1e-11
ref|XP_002325490.1| predicted protein [Populus trichocarpa] gi|2...    47   4e-11
ref|XP_003533799.1| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP...    47   5e-11
gb|AAK73153.1|AC079022_26 putative ATP-dependent RNA helicase [O...    48   9e-11
gb|EEC78384.1| hypothetical protein OsI_18162 [Oryza sativa Indi...    48   9e-11

>ref|XP_003606390.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
           gi|355507445|gb|AES88587.1| DEAD-box ATP-dependent RNA
           helicase [Medicago truncatula]
          Length = 613

 Score = 49.3 bits (116), Expect(2) = 1e-11
 Identities = 21/24 (87%), Positives = 22/24 (91%)
 Frame = -1

Query: 74  GLRFPNVTCIIQYDSPGEASEYVH 3
           GL FPNV CIIQYDSPGEA+EYVH
Sbjct: 424 GLDFPNVRCIIQYDSPGEATEYVH 447



 Score = 45.1 bits (105), Expect(2) = 1e-11
 Identities = 23/36 (63%), Positives = 27/36 (75%), Gaps = 3/36 (8%)
 Frame = -2

Query: 160 HGTRGQEDRISGF---KTEKSAILLCTDVASRGLDF 62
           HG   QEDR + F   KTEKSA+LL TDV++RGLDF
Sbjct: 392 HGNMEQEDRTTSFQAFKTEKSALLLSTDVSARGLDF 427


>ref|XP_002325490.1| predicted protein [Populus trichocarpa] gi|222862365|gb|EEE99871.1|
           predicted protein [Populus trichocarpa]
          Length = 594

 Score = 46.6 bits (109), Expect(2) = 4e-11
 Identities = 19/24 (79%), Positives = 21/24 (87%)
 Frame = -1

Query: 74  GLRFPNVTCIIQYDSPGEASEYVH 3
           GL FP V CI+QYDSPGEA+EYVH
Sbjct: 404 GLDFPKVRCIVQYDSPGEATEYVH 427



 Score = 45.8 bits (107), Expect(2) = 4e-11
 Identities = 23/36 (63%), Positives = 26/36 (72%), Gaps = 3/36 (8%)
 Frame = -2

Query: 160 HGTRGQEDR---ISGFKTEKSAILLCTDVASRGLDF 62
           HG   QEDR      FKTEKSA+LL TD+A+RGLDF
Sbjct: 372 HGNMKQEDRRNTFQAFKTEKSALLLSTDIAARGLDF 407


>ref|XP_003533799.1| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP-dependent RNA helicase
           17-like [Glycine max]
          Length = 596

 Score = 47.0 bits (110), Expect(2) = 5e-11
 Identities = 20/24 (83%), Positives = 21/24 (87%)
 Frame = -1

Query: 74  GLRFPNVTCIIQYDSPGEASEYVH 3
           GL FP V CIIQYDSPGEA+EYVH
Sbjct: 406 GLDFPKVRCIIQYDSPGEATEYVH 429



 Score = 45.1 bits (105), Expect(2) = 5e-11
 Identities = 23/36 (63%), Positives = 26/36 (72%), Gaps = 3/36 (8%)
 Frame = -2

Query: 160 HGTRGQEDR---ISGFKTEKSAILLCTDVASRGLDF 62
           HG   QEDR      FKTEKSA+LL TDV++RGLDF
Sbjct: 374 HGNMQQEDRRTSFQAFKTEKSALLLSTDVSARGLDF 409


>gb|AAK73153.1|AC079022_26 putative ATP-dependent RNA helicase [Oryza sativa]
          Length = 601

 Score = 48.1 bits (113), Expect(2) = 9e-11
 Identities = 21/24 (87%), Positives = 21/24 (87%)
 Frame = -1

Query: 74  GLRFPNVTCIIQYDSPGEASEYVH 3
           GL FP V CIIQYDSPGEASEYVH
Sbjct: 413 GLDFPKVKCIIQYDSPGEASEYVH 436



 Score = 43.1 bits (100), Expect(2) = 9e-11
 Identities = 22/36 (61%), Positives = 26/36 (72%), Gaps = 3/36 (8%)
 Frame = -2

Query: 160 HGTRGQEDR---ISGFKTEKSAILLCTDVASRGLDF 62
           HG   Q+DR     GF +EKSAIL+ TDVA+RGLDF
Sbjct: 381 HGNMDQDDRKKSFLGFSSEKSAILVSTDVAARGLDF 416


>gb|EEC78384.1| hypothetical protein OsI_18162 [Oryza sativa Indica Group]
          Length = 591

 Score = 48.1 bits (113), Expect(2) = 9e-11
 Identities = 21/24 (87%), Positives = 21/24 (87%)
 Frame = -1

Query: 74  GLRFPNVTCIIQYDSPGEASEYVH 3
           GL FP V CIIQYDSPGEASEYVH
Sbjct: 403 GLDFPKVKCIIQYDSPGEASEYVH 426



 Score = 43.1 bits (100), Expect(2) = 9e-11
 Identities = 22/36 (61%), Positives = 26/36 (72%), Gaps = 3/36 (8%)
 Frame = -2

Query: 160 HGTRGQEDR---ISGFKTEKSAILLCTDVASRGLDF 62
           HG   Q+DR     GF +EKSAIL+ TDVA+RGLDF
Sbjct: 371 HGNMDQDDRKKSFLGFSSEKSAILVSTDVAARGLDF 406