BLASTX nr result

ID: Coptis24_contig00011995 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00011995
         (930 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277204.1| PREDICTED: uncharacterized protein LOC100243...   421   e-115
ref|XP_002322201.1| predicted protein [Populus trichocarpa] gi|2...   414   e-113
emb|CBI14939.3| unnamed protein product [Vitis vinifera]              412   e-113
ref|XP_002511308.1| conserved hypothetical protein [Ricinus comm...   407   e-111
ref|XP_002318087.1| predicted protein [Populus trichocarpa] gi|2...   397   e-108

>ref|XP_002277204.1| PREDICTED: uncharacterized protein LOC100243254 [Vitis vinifera]
          Length = 307

 Score =  421 bits (1082), Expect = e-115
 Identities = 196/269 (72%), Positives = 222/269 (82%)
 Frame = +2

Query: 95  MQDPIGIPTCFSAGDKPTDDPAAVTRSGQSVFMSVYQTKLAGKCRLITITWCKNLLLHGL 274
           MQDPIGIP CFS+ +K TDDPAAVTRSGQSVFM VY+TK+A +CRLITITWCKNLLLHGL
Sbjct: 1   MQDPIGIPACFSSVEKQTDDPAAVTRSGQSVFMYVYRTKIADQCRLITITWCKNLLLHGL 60

Query: 275 SISIEGLDGDNQFNCKVELKPWYFWRKHGSNRFQVDGKLVEVYWDLKAAKFSGETEPQSD 454
           S+++EG DG++Q+ CKVELKPWYFWRK GS RF VD K V+++WDLKAAKF+GETEP S+
Sbjct: 61  SVAVEGPDGESQYTCKVELKPWYFWRKQGSKRFVVDDKPVDIFWDLKAAKFNGETEPSSE 120

Query: 455 YYXXXXXXXXXXXXXGDLKKDAYRKTGSRPSLIEPILVSKKEHIFGKKKFSTRAKFHEKD 634
           YY             GDLKKDAYRKTG RP+LI+PILVSKKEHIFGKKKFST+AKFHE+ 
Sbjct: 121 YYVAVVCNEEVVLLLGDLKKDAYRKTGCRPALIDPILVSKKEHIFGKKKFSTKAKFHERG 180

Query: 635 RFHEISIECNTNNLNTCNISANNSSISGFDPEMEIRIDGHLSIHVKHLQWKFRGNESIFV 814
           RFH+ISIEC   +  +     N +S    DPEMEIRIDGHL IHVKHLQWKFRGNESI V
Sbjct: 181 RFHDISIECKNRSGGSGGSMGNGNSCGRVDPEMEIRIDGHLVIHVKHLQWKFRGNESIHV 240

Query: 815 NKIRVEVYWDVHDWLFMPGLRHALIVFKP 901
           NK+RVEVYWDVHDWLF PGLRHAL +FKP
Sbjct: 241 NKLRVEVYWDVHDWLFSPGLRHALFIFKP 269


>ref|XP_002322201.1| predicted protein [Populus trichocarpa] gi|222869197|gb|EEF06328.1|
           predicted protein [Populus trichocarpa]
          Length = 328

 Score =  414 bits (1064), Expect = e-113
 Identities = 194/270 (71%), Positives = 224/270 (82%), Gaps = 1/270 (0%)
 Frame = +2

Query: 95  MQD-PIGIPTCFSAGDKPTDDPAAVTRSGQSVFMSVYQTKLAGKCRLITITWCKNLLLHG 271
           MQD PIGIP CF++G+K  DDPA VTRSGQSVFMS Y+TK+A +CRLITITWCKNLLLHG
Sbjct: 1   MQDHPIGIPACFTSGEKVADDPATVTRSGQSVFMSAYRTKIADQCRLITITWCKNLLLHG 60

Query: 272 LSISIEGLDGDNQFNCKVELKPWYFWRKHGSNRFQVDGKLVEVYWDLKAAKFSGETEPQS 451
           LS+S+EG +G++Q+ CK+ELKPWYFWRK GS RF V+GK V+++WDLKAAKF GETEP S
Sbjct: 61  LSVSVEGPEGESQYTCKLELKPWYFWRKQGSKRFVVEGKAVDIFWDLKAAKFKGETEPNS 120

Query: 452 DYYXXXXXXXXXXXXXGDLKKDAYRKTGSRPSLIEPILVSKKEHIFGKKKFSTRAKFHEK 631
           +YY             GDLKKDAYRKTG RP+LI+PILVS+KEHIFGKKKF+TR KFHEK
Sbjct: 121 EYYVAVVCDEEVVLLLGDLKKDAYRKTGCRPALIDPILVSRKEHIFGKKKFATRIKFHEK 180

Query: 632 DRFHEISIECNTNNLNTCNISANNSSISGFDPEMEIRIDGHLSIHVKHLQWKFRGNESIF 811
            RFHEISIEC  N  N+  I +N +SI+G +PEMEIRIDGHL IHVKHLQWKFRGNE I 
Sbjct: 181 GRFHEISIECK-NGSNSGTIVSNGNSINGDEPEMEIRIDGHLVIHVKHLQWKFRGNEYIN 239

Query: 812 VNKIRVEVYWDVHDWLFMPGLRHALIVFKP 901
           + K+RVEVYWDVHDWLF PGLRHAL +FKP
Sbjct: 240 LRKLRVEVYWDVHDWLFSPGLRHALFIFKP 269


>emb|CBI14939.3| unnamed protein product [Vitis vinifera]
          Length = 303

 Score =  412 bits (1059), Expect = e-113
 Identities = 196/269 (72%), Positives = 219/269 (81%)
 Frame = +2

Query: 95  MQDPIGIPTCFSAGDKPTDDPAAVTRSGQSVFMSVYQTKLAGKCRLITITWCKNLLLHGL 274
           MQDPIGIP CFS+ +K TDDPAAVTRSGQSVFM VY+TK+A +CRLITITWCKNLLLHGL
Sbjct: 21  MQDPIGIPACFSSVEKQTDDPAAVTRSGQSVFMYVYRTKIADQCRLITITWCKNLLLHGL 80

Query: 275 SISIEGLDGDNQFNCKVELKPWYFWRKHGSNRFQVDGKLVEVYWDLKAAKFSGETEPQSD 454
           S+++EG DG++Q+ CKVELKPWYFWRK GS RF VD K V+++WDLKAAKF+GETEP S+
Sbjct: 81  SVAVEGPDGESQYTCKVELKPWYFWRKQGSKRFVVDDKPVDIFWDLKAAKFNGETEPSSE 140

Query: 455 YYXXXXXXXXXXXXXGDLKKDAYRKTGSRPSLIEPILVSKKEHIFGKKKFSTRAKFHEKD 634
           YY             GDLKKDAYRKTG RP+LI+PILVSKKEHIFGKKKFST+AKFHE+ 
Sbjct: 141 YYVAVVCNEEVVLLLGDLKKDAYRKTGCRPALIDPILVSKKEHIFGKKKFSTKAKFHERG 200

Query: 635 RFHEISIECNTNNLNTCNISANNSSISGFDPEMEIRIDGHLSIHVKHLQWKFRGNESIFV 814
           RFH+ISIEC            N S  SG   EMEIRIDGHL IHVKHLQWKFRGNESI V
Sbjct: 201 RFHDISIECK-----------NRSGGSGGSMEMEIRIDGHLVIHVKHLQWKFRGNESIHV 249

Query: 815 NKIRVEVYWDVHDWLFMPGLRHALIVFKP 901
           NK+RVEVYWDVHDWLF PGLRHAL +FKP
Sbjct: 250 NKLRVEVYWDVHDWLFSPGLRHALFIFKP 278


>ref|XP_002511308.1| conserved hypothetical protein [Ricinus communis]
           gi|223550423|gb|EEF51910.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 325

 Score =  407 bits (1047), Expect = e-111
 Identities = 192/270 (71%), Positives = 220/270 (81%), Gaps = 1/270 (0%)
 Frame = +2

Query: 95  MQD-PIGIPTCFSAGDKPTDDPAAVTRSGQSVFMSVYQTKLAGKCRLITITWCKNLLLHG 271
           MQD PIGIP CF++G+K TDDPA +TRSGQSVFMSVY+TK+A +CRLITITWCKNLLLHG
Sbjct: 1   MQDHPIGIPACFTSGEKLTDDPATITRSGQSVFMSVYRTKIADQCRLITITWCKNLLLHG 60

Query: 272 LSISIEGLDGDNQFNCKVELKPWYFWRKHGSNRFQVDGKLVEVYWDLKAAKFSGETEPQS 451
           LS+S+EG +GD Q+ CKVELKPWYFWRK GS RF VDGK V+++WDLKAAKF+GETEP S
Sbjct: 61  LSVSVEGPEGDGQYTCKVELKPWYFWRKQGSKRFIVDGKAVDIFWDLKAAKFNGETEPIS 120

Query: 452 DYYXXXXXXXXXXXXXGDLKKDAYRKTGSRPSLIEPILVSKKEHIFGKKKFSTRAKFHEK 631
           +YY             GDLKKDAYRKTG RP+LI+PILVS+KEHIFGKKKF TR KFH K
Sbjct: 121 EYYVAVVCNEEVVLLLGDLKKDAYRKTGCRPALIDPILVSRKEHIFGKKKFCTRVKFHGK 180

Query: 632 DRFHEISIECNTNNLNTCNISANNSSISGFDPEMEIRIDGHLSIHVKHLQWKFRGNESIF 811
            R HEISIEC     N  + S  NS  +G +PE+EIRIDGHL+IHVKHL WKFRGN+S  
Sbjct: 181 GRLHEISIECK----NRSDPSNGNSVSNGVEPELEIRIDGHLAIHVKHLHWKFRGNQSFN 236

Query: 812 VNKIRVEVYWDVHDWLFMPGLRHALIVFKP 901
           +NK+RVEVYWDVHDWLF PGLRHAL +FKP
Sbjct: 237 LNKLRVEVYWDVHDWLFSPGLRHALFIFKP 266


>ref|XP_002318087.1| predicted protein [Populus trichocarpa] gi|222858760|gb|EEE96307.1|
           predicted protein [Populus trichocarpa]
          Length = 329

 Score =  397 bits (1020), Expect = e-108
 Identities = 186/273 (68%), Positives = 219/273 (80%), Gaps = 3/273 (1%)
 Frame = +2

Query: 92  MMQDPIGIPTCFSAGDKPTDDPAAVTRSGQSVFMSVYQTKLAGKCRLITITWCKNLLLHG 271
           M+  PIGIP CF++ DK TDDPA VTRSGQSVF+SVY+TK+A +CRLITI WCKNLLLH 
Sbjct: 1   MLDHPIGIPACFTSSDKVTDDPATVTRSGQSVFVSVYRTKIADQCRLITIRWCKNLLLHR 60

Query: 272 LSISIEGLDGDNQFNCKVELKPWYFWRKHGSNRFQVDGKLVEVYWDLKAAKFSGETEPQS 451
           LS+S+EG +G++ + CKVELKPWYFWRK GS RF V+GK V+++WDLK A+F+GETEP S
Sbjct: 61  LSVSVEGPEGESHYTCKVELKPWYFWRKQGSKRFVVEGKAVDIFWDLKTARFNGETEPNS 120

Query: 452 DYYXXXXXXXXXXXXXGDLKKDAYRKTGSRPSLIEPILVSKKEHIFGKKKFSTRAKFHEK 631
           +YY             GDLKKDAY+KTG RP LI+PILVS+KEHIFGKKKF+TR KFHEK
Sbjct: 121 EYYVAVVCDEEVVLLLGDLKKDAYKKTGCRPGLIDPILVSRKEHIFGKKKFATRIKFHEK 180

Query: 632 DRFHEISIECNTNNLNTCNIS---ANNSSISGFDPEMEIRIDGHLSIHVKHLQWKFRGNE 802
            RFHEISIEC     N CN S   +N +SI+  +PEM+IRIDG L IHVKHLQWKFRGNE
Sbjct: 181 GRFHEISIECR----NICNYSGNASNGNSINRDEPEMDIRIDGDLVIHVKHLQWKFRGNE 236

Query: 803 SIFVNKIRVEVYWDVHDWLFMPGLRHALIVFKP 901
            I ++K+RVEVYWDVHDWLF PGLRHAL +FKP
Sbjct: 237 YINLHKLRVEVYWDVHDWLFSPGLRHALFIFKP 269


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