BLASTX nr result

ID: Coptis24_contig00011993 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00011993
         (218 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002509985.1| Cell division protein ftsH, putative [Ricinu...    77   7e-22
ref|XP_002299463.1| predicted protein [Populus trichocarpa] gi|2...    72   2e-21
ref|XP_003532440.1| PREDICTED: ATP-dependent zinc metalloproteas...    74   3e-21
ref|XP_002266075.1| PREDICTED: ATP-dependent zinc metalloproteas...    70   1e-20
ref|XP_004162678.1| PREDICTED: ATP-dependent zinc metalloproteas...    69   2e-20

>ref|XP_002509985.1| Cell division protein ftsH, putative [Ricinus communis]
           gi|223549884|gb|EEF51372.1| Cell division protein ftsH,
           putative [Ricinus communis]
          Length = 925

 Score = 76.6 bits (187), Expect(2) = 7e-22
 Identities = 37/46 (80%), Positives = 40/46 (86%)
 Frame = +3

Query: 3   EDAKVEFCKCISIISRGQSLSQTVFHRLDDESYIFECRPQLLHRLQ 140
           EDAKVE C  ISI+ RGQ+LSQ VFHRLDDESY+FE RPQLLHRLQ
Sbjct: 700 EDAKVECCDRISIVPRGQTLSQVVFHRLDDESYMFERRPQLLHRLQ 745



 Score = 52.0 bits (123), Expect(2) = 7e-22
 Identities = 25/33 (75%), Positives = 27/33 (81%)
 Frame = +1

Query: 118 LSCCTGFRAAEEVIYGRDTSRASVSYLADASWL 216
           L    G RAAEEVIYGR+TSRAS+ YLADASWL
Sbjct: 744 LQVLLGARAAEEVIYGRNTSRASIPYLADASWL 776


>ref|XP_002299463.1| predicted protein [Populus trichocarpa] gi|222846721|gb|EEE84268.1|
           predicted protein [Populus trichocarpa]
          Length = 932

 Score = 71.6 bits (174), Expect(2) = 2e-21
 Identities = 35/46 (76%), Positives = 39/46 (84%)
 Frame = +3

Query: 3   EDAKVEFCKCISIISRGQSLSQTVFHRLDDESYIFECRPQLLHRLQ 140
           E+AKVE C  ISI+ RGQ+LSQ VFHRLDDESY+FE  PQLLHRLQ
Sbjct: 704 ENAKVECCDRISIVPRGQTLSQLVFHRLDDESYMFERLPQLLHRLQ 749



 Score = 55.5 bits (132), Expect(2) = 2e-21
 Identities = 27/28 (96%), Positives = 27/28 (96%)
 Frame = +1

Query: 133 GFRAAEEVIYGRDTSRASVSYLADASWL 216
           G RAAEEVIYGRDTSRASVSYLADASWL
Sbjct: 753 GGRAAEEVIYGRDTSRASVSYLADASWL 780


>ref|XP_003532440.1| PREDICTED: ATP-dependent zinc metalloprotease FTSH 2,
           chloroplastic-like [Glycine max]
          Length = 925

 Score = 73.6 bits (179), Expect(2) = 3e-21
 Identities = 36/46 (78%), Positives = 39/46 (84%)
 Frame = +3

Query: 3   EDAKVEFCKCISIISRGQSLSQTVFHRLDDESYIFECRPQLLHRLQ 140
           E AKVE C  ISI+ RGQ+LSQ VFHRLDDESY+FE RPQLLHRLQ
Sbjct: 699 EHAKVECCDRISIVPRGQTLSQLVFHRLDDESYMFERRPQLLHRLQ 744



 Score = 53.1 bits (126), Expect(2) = 3e-21
 Identities = 26/33 (78%), Positives = 27/33 (81%)
 Frame = +1

Query: 118 LSCCTGFRAAEEVIYGRDTSRASVSYLADASWL 216
           L    G RAAEEVIYGRDTS+ASV YLADASWL
Sbjct: 743 LQVLLGGRAAEEVIYGRDTSKASVDYLADASWL 775


>ref|XP_002266075.1| PREDICTED: ATP-dependent zinc metalloprotease FtsH [Vitis vinifera]
           gi|296090151|emb|CBI39970.3| unnamed protein product
           [Vitis vinifera]
          Length = 907

 Score = 70.5 bits (171), Expect(2) = 1e-20
 Identities = 35/46 (76%), Positives = 38/46 (82%)
 Frame = +3

Query: 3   EDAKVEFCKCISIISRGQSLSQTVFHRLDDESYIFECRPQLLHRLQ 140
           E AKVE C  IS+I RGQ+LSQ VF RLDDESY+FE RPQLLHRLQ
Sbjct: 680 ESAKVERCDRISVIPRGQTLSQVVFDRLDDESYMFERRPQLLHRLQ 725



 Score = 54.3 bits (129), Expect(2) = 1e-20
 Identities = 27/33 (81%), Positives = 27/33 (81%)
 Frame = +1

Query: 118 LSCCTGFRAAEEVIYGRDTSRASVSYLADASWL 216
           L    G RAAEEVIYGRDTSRASV YLADASWL
Sbjct: 724 LQVLLGGRAAEEVIYGRDTSRASVDYLADASWL 756


>ref|XP_004162678.1| PREDICTED: ATP-dependent zinc metalloprotease FtsH 2-like [Cucumis
           sativus]
          Length = 962

 Score = 68.9 bits (167), Expect(2) = 2e-20
 Identities = 35/46 (76%), Positives = 37/46 (80%)
 Frame = +3

Query: 3   EDAKVEFCKCISIISRGQSLSQTVFHRLDDESYIFECRPQLLHRLQ 140
           E AKVE C  ISII RG +LSQ VF RLDDESY+FE RPQLLHRLQ
Sbjct: 726 ESAKVECCDRISIIPRGWTLSQVVFRRLDDESYMFERRPQLLHRLQ 771



 Score = 54.7 bits (130), Expect(2) = 2e-20
 Identities = 26/28 (92%), Positives = 27/28 (96%)
 Frame = +1

Query: 133 GFRAAEEVIYGRDTSRASVSYLADASWL 216
           G RAAEEVIYGRDTS+ASVSYLADASWL
Sbjct: 775 GARAAEEVIYGRDTSKASVSYLADASWL 802


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