BLASTX nr result

ID: Coptis24_contig00011992 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00011992
         (221 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266075.1| PREDICTED: ATP-dependent zinc metalloproteas...   103   2e-20
ref|XP_002509985.1| Cell division protein ftsH, putative [Ricinu...   103   2e-20
ref|XP_002299463.1| predicted protein [Populus trichocarpa] gi|2...   101   7e-20
ref|XP_002869753.1| hypothetical protein ARALYDRAFT_492469 [Arab...    97   1e-18
ref|NP_567691.1| FtsH extracellular protease [Arabidopsis thalia...    97   1e-18

>ref|XP_002266075.1| PREDICTED: ATP-dependent zinc metalloprotease FtsH [Vitis vinifera]
           gi|296090151|emb|CBI39970.3| unnamed protein product
           [Vitis vinifera]
          Length = 907

 Score =  103 bits (256), Expect = 2e-20
 Identities = 48/59 (81%), Positives = 55/59 (93%)
 Frame = +3

Query: 45  RRGHGSILQSDVDDVVDHLTVGPKRVGMELGHQGQCRRATTEVGTAMTSYLLKRYEDAK 221
           R+GH +ILQSDVD+ VD LTVGPKRVG+ELGHQGQCRRATTEVGTA+TS+LL+RYE AK
Sbjct: 625 RKGHEAILQSDVDEAVDRLTVGPKRVGIELGHQGQCRRATTEVGTAITSHLLRRYESAK 683


>ref|XP_002509985.1| Cell division protein ftsH, putative [Ricinus communis]
           gi|223549884|gb|EEF51372.1| Cell division protein ftsH,
           putative [Ricinus communis]
          Length = 925

 Score =  103 bits (256), Expect = 2e-20
 Identities = 47/59 (79%), Positives = 54/59 (91%)
 Frame = +3

Query: 45  RRGHGSILQSDVDDVVDHLTVGPKRVGMELGHQGQCRRATTEVGTAMTSYLLKRYEDAK 221
           R+GH SI+QSD+DD VD LTVGPKRVG++LGHQGQCRRATTEVG AMTS+LL+ YEDAK
Sbjct: 645 RQGHASIIQSDIDDAVDRLTVGPKRVGIDLGHQGQCRRATTEVGVAMTSHLLRLYEDAK 703


>ref|XP_002299463.1| predicted protein [Populus trichocarpa] gi|222846721|gb|EEE84268.1|
           predicted protein [Populus trichocarpa]
          Length = 932

 Score =  101 bits (251), Expect = 7e-20
 Identities = 46/59 (77%), Positives = 54/59 (91%)
 Frame = +3

Query: 45  RRGHGSILQSDVDDVVDHLTVGPKRVGMELGHQGQCRRATTEVGTAMTSYLLKRYEDAK 221
           R+GH +ILQSD+DD VD LTVGPKRVG+ELGHQGQCRRATTE+G  MTS+LL+RYE+AK
Sbjct: 649 RQGHAAILQSDMDDAVDRLTVGPKRVGIELGHQGQCRRATTELGVVMTSHLLRRYENAK 707


>ref|XP_002869753.1| hypothetical protein ARALYDRAFT_492469 [Arabidopsis lyrata subsp.
           lyrata] gi|297315589|gb|EFH46012.1| hypothetical protein
           ARALYDRAFT_492469 [Arabidopsis lyrata subsp. lyrata]
          Length = 933

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 45/59 (76%), Positives = 52/59 (88%)
 Frame = +3

Query: 45  RRGHGSILQSDVDDVVDHLTVGPKRVGMELGHQGQCRRATTEVGTAMTSYLLKRYEDAK 221
           R+ H SILQSD+DD VD LTVGP R+G+ELGHQGQCRRATTEVG A+TS+LL RYE+AK
Sbjct: 647 RKTHSSILQSDMDDAVDRLTVGPTRIGLELGHQGQCRRATTEVGVAITSHLLLRYENAK 705


>ref|NP_567691.1| FtsH extracellular protease [Arabidopsis thaliana]
           gi|2262118|gb|AAB63626.1| cell division protein isolog
           [Arabidopsis thaliana] gi|4972098|emb|CAB43894.1| cell
           division protein-like [Arabidopsis thaliana]
           gi|7269243|emb|CAB81312.1| cell division protein-like
           [Arabidopsis thaliana] gi|332659430|gb|AEE84830.1| FtsH
           extracellular protease [Arabidopsis thaliana]
          Length = 946

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 45/59 (76%), Positives = 52/59 (88%)
 Frame = +3

Query: 45  RRGHGSILQSDVDDVVDHLTVGPKRVGMELGHQGQCRRATTEVGTAMTSYLLKRYEDAK 221
           R+ H SILQSD+DD VD LTVGP R+G+ELGHQGQCRRATTEVG A+TS+LL RYE+AK
Sbjct: 660 RKTHNSILQSDMDDAVDRLTVGPTRIGLELGHQGQCRRATTEVGVAITSHLLLRYENAK 718


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