BLASTX nr result

ID: Coptis24_contig00011982 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00011982
         (765 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003550614.1| PREDICTED: uncharacterized protein LOC100799...   300   3e-79
ref|XP_003542361.1| PREDICTED: uncharacterized protein LOC100798...   300   3e-79
ref|XP_002278940.1| PREDICTED: uncharacterized protein LOC100261...   300   3e-79
ref|XP_002330509.1| predicted protein [Populus trichocarpa] gi|2...   296   3e-78
ref|XP_004144030.1| PREDICTED: uncharacterized protein LOC101208...   286   3e-75

>ref|XP_003550614.1| PREDICTED: uncharacterized protein LOC100799495 [Glycine max]
          Length = 190

 Score =  300 bits (767), Expect = 3e-79
 Identities = 138/178 (77%), Positives = 162/178 (91%), Gaps = 1/178 (0%)
 Frame = -2

Query: 665 SNGE-PASWDELYNINLIPSELFLKFRKEVEGIRLGLNLEFYNAASNDYKAKLVLKPLSP 489
           +NGE P SWDELYNINL+PSELFLKFRKE++GIR+GLN+EFYNA  N+Y+AKLVLKPL+P
Sbjct: 8   NNGEEPTSWDELYNINLMPSELFLKFRKELQGIRVGLNMEFYNAPVNEYQAKLVLKPLTP 67

Query: 488 ERRWKFMYEPIHQDIRVLSKKIPITQYLNIQVGVGHNFLLHATGWKWKLTTSWGGDGVSR 309
           E +WK +YEP+HQD+RVLSKKIPIT++LN+QVGVGHNF +HATGWKWKLTT  GGDG+SR
Sbjct: 68  EWKWKIIYEPLHQDVRVLSKKIPITKFLNLQVGVGHNFQMHATGWKWKLTTCLGGDGISR 127

Query: 308 IRNKTSVDLLPGMDFRFGWRAEYVLPELHGAVGTEEPMFNLDSGRLQASLDRVEAIFT 135
           IRNKTS+ L PG D RFGWRA+YVLPE+ GA+GT+EPMFN+ SGRLQASLDRVEAI T
Sbjct: 128 IRNKTSIGLFPGFDLRFGWRADYVLPEITGALGTDEPMFNMHSGRLQASLDRVEAILT 185


>ref|XP_003542361.1| PREDICTED: uncharacterized protein LOC100798363 [Glycine max]
          Length = 189

 Score =  300 bits (767), Expect = 3e-79
 Identities = 137/174 (78%), Positives = 159/174 (91%)
 Frame = -2

Query: 656 EPASWDELYNINLIPSELFLKFRKEVEGIRLGLNLEFYNAASNDYKAKLVLKPLSPERRW 477
           EP SWDELYNINL+PSELFLKFRKE++GIR+GLN+EFYNA  N+Y+AKLVLKPL+PE +W
Sbjct: 11  EPTSWDELYNINLMPSELFLKFRKELQGIRVGLNMEFYNAPVNEYQAKLVLKPLTPEWKW 70

Query: 476 KFMYEPIHQDIRVLSKKIPITQYLNIQVGVGHNFLLHATGWKWKLTTSWGGDGVSRIRNK 297
           K +YEP+HQD+RVLSKKIPIT++LN+QVGVGHNF +HATGWKWKLTT  GGDG+SRIRNK
Sbjct: 71  KIIYEPLHQDVRVLSKKIPITKFLNLQVGVGHNFQMHATGWKWKLTTCLGGDGISRIRNK 130

Query: 296 TSVDLLPGMDFRFGWRAEYVLPELHGAVGTEEPMFNLDSGRLQASLDRVEAIFT 135
           TSV L PG D RFGWRA+YVLPE+ GA+GT+EPMFN+ SGRLQASLDRVEAI T
Sbjct: 131 TSVGLFPGFDLRFGWRADYVLPEITGALGTDEPMFNMHSGRLQASLDRVEAILT 184


>ref|XP_002278940.1| PREDICTED: uncharacterized protein LOC100261240 [Vitis vinifera]
           gi|297738567|emb|CBI27812.3| unnamed protein product
           [Vitis vinifera]
          Length = 186

 Score =  300 bits (767), Expect = 3e-79
 Identities = 138/178 (77%), Positives = 162/178 (91%), Gaps = 1/178 (0%)
 Frame = -2

Query: 665 SNGE-PASWDELYNINLIPSELFLKFRKEVEGIRLGLNLEFYNAASNDYKAKLVLKPLSP 489
           SNGE P SWDELYNINL+PSELFLKFRKEV+G+R+GLNLEFYNA  N+Y+AKLVLKPLSP
Sbjct: 5   SNGEEPVSWDELYNINLMPSELFLKFRKEVQGVRVGLNLEFYNAPVNEYQAKLVLKPLSP 64

Query: 488 ERRWKFMYEPIHQDIRVLSKKIPITQYLNIQVGVGHNFLLHATGWKWKLTTSWGGDGVSR 309
           +RRWKF+YEP+H D+ +LSKKIPIT++LN+QVGVGH+F LH TGWKWKLTT  GG+G+SR
Sbjct: 65  DRRWKFIYEPVHHDVHILSKKIPITKFLNLQVGVGHSFQLHTTGWKWKLTTCLGGNGISR 124

Query: 308 IRNKTSVDLLPGMDFRFGWRAEYVLPELHGAVGTEEPMFNLDSGRLQASLDRVEAIFT 135
           IRNKTS+ L PG+DFRFGW A+YVLPE+ GAVGT EP+FN++SGRLQASLDRVEAI T
Sbjct: 125 IRNKTSLGLFPGLDFRFGWTADYVLPEITGAVGTGEPLFNMNSGRLQASLDRVEAILT 182


>ref|XP_002330509.1| predicted protein [Populus trichocarpa] gi|222872443|gb|EEF09574.1|
           predicted protein [Populus trichocarpa]
          Length = 194

 Score =  296 bits (758), Expect = 3e-78
 Identities = 139/187 (74%), Positives = 164/187 (87%), Gaps = 10/187 (5%)
 Frame = -2

Query: 665 SNGE-PASWDELYNINLIPSELFLKFRKEVEGIRLGLNLEFYNAASNDYKAKLVLKPLSP 489
           SNGE P SW+ELYNINLIPSELFLKFRKE+EGIR+G+NLEFYNA  N+++ K+VLKPLSP
Sbjct: 5   SNGEEPTSWEELYNINLIPSELFLKFRKEIEGIRVGVNLEFYNAPINEFQGKIVLKPLSP 64

Query: 488 ERRWKFMYEPIHQDIRVLSKKIPITQYLNIQVGVGHNFLLHATGWKWKLTTSWGGDGVSR 309
           ERRWKF+YEPIHQD+R+LSKKIP+T++LN+QVGVGHNF LHATGWKWKLTT  GGDG+SR
Sbjct: 65  ERRWKFIYEPIHQDVRILSKKIPVTKFLNLQVGVGHNFQLHATGWKWKLTTCLGGDGISR 124

Query: 308 IRNKTSVDLLPGMDFRFGWRAEYVLPELHG---------AVGTEEPMFNLDSGRLQASLD 156
           I+NKTS+ L PGMD RFGWRA+YVLPE+ G         A+G +EP+FN++SGRLQASLD
Sbjct: 125 IQNKTSLGLFPGMDLRFGWRADYVLPEITGQMKPYYAFRALGADEPLFNMNSGRLQASLD 184

Query: 155 RVEAIFT 135
           RVEAI T
Sbjct: 185 RVEAILT 191


>ref|XP_004144030.1| PREDICTED: uncharacterized protein LOC101208324 [Cucumis sativus]
           gi|449500489|ref|XP_004161111.1| PREDICTED:
           uncharacterized protein LOC101230051 [Cucumis sativus]
          Length = 187

 Score =  286 bits (732), Expect = 3e-75
 Identities = 129/178 (72%), Positives = 159/178 (89%)
 Frame = -2

Query: 668 SSNGEPASWDELYNINLIPSELFLKFRKEVEGIRLGLNLEFYNAASNDYKAKLVLKPLSP 489
           SS  EP SW++L +INL+PSELFLKFRKE++G R+G+NLEFYNA  N+Y+AKLVLKPL P
Sbjct: 5   SSGDEPTSWEDLCSINLMPSELFLKFRKELQGFRVGVNLEFYNAPCNEYEAKLVLKPLYP 64

Query: 488 ERRWKFMYEPIHQDIRVLSKKIPITQYLNIQVGVGHNFLLHATGWKWKLTTSWGGDGVSR 309
            +RWKF+YEPI QDIR+LSKKIP+T++LN+QVG+GHNF +HATGWKWKLTT  GGDGVSR
Sbjct: 65  NQRWKFIYEPIRQDIRLLSKKIPVTKFLNLQVGIGHNFQMHATGWKWKLTTCLGGDGVSR 124

Query: 308 IRNKTSVDLLPGMDFRFGWRAEYVLPELHGAVGTEEPMFNLDSGRLQASLDRVEAIFT 135
           IRNK+S+   PG+DFRFGWRA+YVLPE+ GA+GT EP+FN++SGRL+ASLDR+EAI T
Sbjct: 125 IRNKSSISPFPGLDFRFGWRADYVLPEITGALGTGEPLFNMNSGRLEASLDRIEAIVT 182


Top