BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00011978
         (650 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274985.1| PREDICTED: 60S ribosomal protein L21-1 [Viti...   192   5e-47
ref|XP_002304624.1| predicted protein [Populus trichocarpa] gi|1...   189   4e-46
gb|ACR50977.1| 60s ribosomal protein L21 [Lycoris radiata]            187   1e-45
ref|XP_002280931.1| PREDICTED: 60S ribosomal protein L21-1 [Viti...   187   1e-45
ref|NP_001173260.1| Os03g0141000 [Oryza sativa Japonica Group] g...   187   1e-45

>ref|XP_002274985.1| PREDICTED: 60S ribosomal protein L21-1 [Vitis vinifera]
           gi|147844300|emb|CAN82115.1| hypothetical protein
           VITISV_031340 [Vitis vinifera]
          Length = 164

 Score =  192 bits (488), Expect = 5e-47
 Identities = 91/119 (76%), Positives = 100/119 (84%), Gaps = 11/119 (9%)
 Frame = -1

Query: 635 KGYIALTTYLRTFKVGDYVDVKVNGAIHKGMPHKFYHGRTGKLWN-----------KQAG 489
           KGYI LT YLRT+K+GDYVD+KVNGAIHKGMPHKFYHGRTGK+WN           KQ G
Sbjct: 22  KGYIPLTVYLRTYKIGDYVDIKVNGAIHKGMPHKFYHGRTGKVWNVTKRAIGVEVNKQVG 81

Query: 488 NRIIRKRIHVRVEHVQPSRCKEEFKLWKIQNDKLETEAKSHGEKINTKRQPEGPKPGFM 312
           NRIIRKRIHVRVEHVQPSRC+EEFKL KI+ND+ + EAK  GEKI+TKRQPEGPKPGFM
Sbjct: 82  NRIIRKRIHVRVEHVQPSRCREEFKLRKIRNDESKAEAKKRGEKISTKRQPEGPKPGFM 140


>ref|XP_002304624.1| predicted protein [Populus trichocarpa] gi|118484710|gb|ABK94225.1|
           unknown [Populus trichocarpa]
           gi|222842056|gb|EEE79603.1| predicted protein [Populus
           trichocarpa]
          Length = 164

 Score =  189 bits (480), Expect = 4e-46
 Identities = 89/119 (74%), Positives = 101/119 (84%), Gaps = 11/119 (9%)
 Frame = -1

Query: 635 KGYIALTTYLRTFKVGDYVDVKVNGAIHKGMPHKFYHGRTGKLWN-----------KQAG 489
           KGYI LTTYLRT+KVGDYVD+KVNGA+HKGMPHKFYHGRTG++WN           KQ G
Sbjct: 22  KGYIPLTTYLRTYKVGDYVDIKVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVVINKQVG 81

Query: 488 NRIIRKRIHVRVEHVQPSRCKEEFKLWKIQNDKLETEAKSHGEKINTKRQPEGPKPGFM 312
           NRII KRIHVRVEHVQPSRC+EEFKL K +ND+L+ EAK+ GEKI+TKRQP+GPKPGFM
Sbjct: 82  NRIIGKRIHVRVEHVQPSRCREEFKLRKKKNDELKAEAKARGEKISTKRQPQGPKPGFM 140


>gb|ACR50977.1| 60s ribosomal protein L21 [Lycoris radiata]
          Length = 164

 Score =  187 bits (476), Expect = 1e-45
 Identities = 89/119 (74%), Positives = 100/119 (84%), Gaps = 11/119 (9%)
 Frame = -1

Query: 635 KGYIALTTYLRTFKVGDYVDVKVNGAIHKGMPHKFYHGRTGKLWN-----------KQAG 489
           KGYI LTTYLR++K+GDYVDVKVNGA+HKGMPHKFYHGRTG +WN           KQ G
Sbjct: 22  KGYIPLTTYLRSYKIGDYVDVKVNGAVHKGMPHKFYHGRTGIVWNVTKRAIGVEINKQVG 81

Query: 488 NRIIRKRIHVRVEHVQPSRCKEEFKLWKIQNDKLETEAKSHGEKINTKRQPEGPKPGFM 312
           NRIIRKRIHVRVEHVQPSRC E+F+L KI+NDKL+ EAK+ GE I+TKRQPEGPKPGFM
Sbjct: 82  NRIIRKRIHVRVEHVQPSRCTEDFRLRKIKNDKLKAEAKARGEVISTKRQPEGPKPGFM 140


>ref|XP_002280931.1| PREDICTED: 60S ribosomal protein L21-1 [Vitis vinifera]
           gi|147789111|emb|CAN73497.1| hypothetical protein
           VITISV_044264 [Vitis vinifera]
           gi|297739795|emb|CBI29977.3| unnamed protein product
           [Vitis vinifera]
          Length = 164

 Score =  187 bits (476), Expect = 1e-45
 Identities = 88/119 (73%), Positives = 101/119 (84%), Gaps = 11/119 (9%)
 Frame = -1

Query: 635 KGYIALTTYLRTFKVGDYVDVKVNGAIHKGMPHKFYHGRTGKLWN-----------KQAG 489
           KGYI LTTYLRTF++G+YVD+KVNGAIHKGMPHKFYHGRTGK+WN           KQ G
Sbjct: 22  KGYIPLTTYLRTFRIGEYVDIKVNGAIHKGMPHKFYHGRTGKVWNVTKRAIGVEVNKQVG 81

Query: 488 NRIIRKRIHVRVEHVQPSRCKEEFKLWKIQNDKLETEAKSHGEKINTKRQPEGPKPGFM 312
           NRII+KRIHVRVEHVQPSRC EEF+L K++ND+L+T AK +GE I+TKRQPEGPKPGFM
Sbjct: 82  NRIIKKRIHVRVEHVQPSRCTEEFRLRKLKNDELKTAAKKNGEIISTKRQPEGPKPGFM 140


>ref|NP_001173260.1| Os03g0141000 [Oryza sativa Japonica Group]
           gi|108706108|gb|ABF93903.1| 60S ribosomal protein L21,
           putative, expressed [Oryza sativa Japonica Group]
           gi|125542345|gb|EAY88484.1| hypothetical protein
           OsI_09955 [Oryza sativa Indica Group]
           gi|125584866|gb|EAZ25530.1| hypothetical protein
           OsJ_09354 [Oryza sativa Japonica Group]
           gi|255674192|dbj|BAH91988.1| Os03g0141000 [Oryza sativa
           Japonica Group]
          Length = 164

 Score =  187 bits (475), Expect = 1e-45
 Identities = 88/119 (73%), Positives = 100/119 (84%), Gaps = 11/119 (9%)
 Frame = -1

Query: 635 KGYIALTTYLRTFKVGDYVDVKVNGAIHKGMPHKFYHGRTGKLWN-----------KQAG 489
           KGYI LTTYLRT+K+GDYVDVKVNGA+HKGMPHKFYHGRTG++WN           KQ G
Sbjct: 22  KGYIPLTTYLRTYKIGDYVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEINKQVG 81

Query: 488 NRIIRKRIHVRVEHVQPSRCKEEFKLWKIQNDKLETEAKSHGEKINTKRQPEGPKPGFM 312
           NRIIRKRIHVRVEHVQPSRC EE +L KI+ND+L+ +AK+ GE I+TKRQPEGPKPGFM
Sbjct: 82  NRIIRKRIHVRVEHVQPSRCTEELRLRKIKNDQLKADAKARGEVISTKRQPEGPKPGFM 140