BLASTX nr result

ID: Coptis24_contig00011962 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00011962
         (367 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002321359.1| predicted protein [Populus trichocarpa] gi|2...    97   1e-18
ref|XP_002519603.1| conserved hypothetical protein [Ricinus comm...    82   3e-14
ref|XP_002966238.1| hypothetical protein SELMODRAFT_407613 [Sela...    66   3e-09
ref|XP_002982310.1| hypothetical protein SELMODRAFT_421789 [Sela...    66   3e-09
ref|XP_003532769.1| PREDICTED: uncharacterized protein LOC100794...    59   4e-07

>ref|XP_002321359.1| predicted protein [Populus trichocarpa] gi|222868355|gb|EEF05486.1|
           predicted protein [Populus trichocarpa]
          Length = 103

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 44/69 (63%), Positives = 57/69 (82%), Gaps = 1/69 (1%)
 Frame = -3

Query: 209 LSFSASLPNDVQGVYA-DSICAVKYTMDPFVDLRESILEMIKNVGVRNWEEMEELIYCYV 33
           +S SASLP DV G ++ D+ICAVK + DPF D+R SILEMI+NVGV +W+EMEEL+YCY+
Sbjct: 21  ISLSASLPEDVCGAFSGDTICAVKLSKDPFSDMRASILEMIQNVGVHDWDEMEELVYCYI 80

Query: 32  VLNSSEIHG 6
            LNS ++HG
Sbjct: 81  ALNSPDLHG 89


>ref|XP_002519603.1| conserved hypothetical protein [Ricinus communis]
           gi|223541193|gb|EEF42748.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 99

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 42/78 (53%), Positives = 57/78 (73%), Gaps = 1/78 (1%)
 Frame = -3

Query: 239 KKHSRHYTATLSFSASLPNDVQGVYADSICAVKYTMDPFVDLRESILEMIKNVGVRNWEE 60
           KK   + +  +SFSASLP DV G  A SI  VK ++DPF +L+ SI+EMI+ + VR+W  
Sbjct: 3   KKIWHNRSNRISFSASLPEDVCGELAGSIGIVKLSVDPFSELKASIVEMIEELDVRDWNA 62

Query: 59  MEELIYCYVVLN-SSEIH 9
           MEEL+YCY+VLN SS++H
Sbjct: 63  MEELVYCYIVLNSSSQVH 80


>ref|XP_002966238.1| hypothetical protein SELMODRAFT_407613 [Selaginella moellendorffii]
           gi|300165658|gb|EFJ32265.1| hypothetical protein
           SELMODRAFT_407613 [Selaginella moellendorffii]
          Length = 227

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 31/84 (36%), Positives = 52/84 (61%)
 Frame = -3

Query: 260 KLTEKRMKKHSRHYTATLSFSASLPNDVQGVYADSICAVKYTMDPFVDLRESILEMIKNV 81
           K+T +R + HS         SA+LP D++G  +++I  V  + DP+ D R S+ +M++  
Sbjct: 126 KITRQRRRNHS--------LSAALPPDLRGPASNAIPLVMESCDPYNDFRVSMEQMVREN 177

Query: 80  GVRNWEEMEELIYCYVVLNSSEIH 9
           G+  W E++EL+YCY+ LNS + H
Sbjct: 178 GIFEWPELQELLYCYIALNSPDQH 201


>ref|XP_002982310.1| hypothetical protein SELMODRAFT_421789 [Selaginella moellendorffii]
           gi|300149902|gb|EFJ16555.1| hypothetical protein
           SELMODRAFT_421789 [Selaginella moellendorffii]
          Length = 227

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 31/84 (36%), Positives = 52/84 (61%)
 Frame = -3

Query: 260 KLTEKRMKKHSRHYTATLSFSASLPNDVQGVYADSICAVKYTMDPFVDLRESILEMIKNV 81
           K+T +R + HS         SA+LP D++G  +++I  V  + DP+ D R S+ +M++  
Sbjct: 126 KITRQRRRNHS--------LSAALPPDLRGPASNAIPLVMESCDPYNDFRVSMEQMVREN 177

Query: 80  GVRNWEEMEELIYCYVVLNSSEIH 9
           G+  W E++EL+YCY+ LNS + H
Sbjct: 178 GIFEWPELQELLYCYIALNSPDQH 201


>ref|XP_003532769.1| PREDICTED: uncharacterized protein LOC100794362 [Glycine max]
          Length = 404

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 35/91 (38%), Positives = 50/91 (54%)
 Frame = -3

Query: 281 VQAMEAKKLTEKRMKKHSRHYTATLSFSASLPNDVQGVYADSICAVKYTMDPFVDLRESI 102
           ++AME KK  + +MKK       T           +G+  DS   VK ++DP  D R+S+
Sbjct: 304 IKAMEEKKKAKLKMKKEEEIVEET----------EEGL--DSFAVVKCSLDPQKDFRDSM 351

Query: 101 LEMIKNVGVRNWEEMEELIYCYVVLNSSEIH 9
           +EMI    +   EEME+L+ CY+ LNSSE H
Sbjct: 352 IEMITEKQISEPEEMEDLLACYLTLNSSEYH 382


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