BLASTX nr result
ID: Coptis24_contig00011957
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00011957
(1708 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002271571.1| PREDICTED: uncharacterized protein LOC100251... 594 e-167
ref|XP_002331856.1| predicted protein [Populus trichocarpa] gi|2... 582 e-163
ref|XP_002519751.1| conserved hypothetical protein [Ricinus comm... 578 e-162
ref|XP_003629892.1| Ribosome maturation factor rimM [Medicago tr... 509 e-142
dbj|BAE71246.1| hypothetical protein [Trifolium pratense] 488 e-135
>ref|XP_002271571.1| PREDICTED: uncharacterized protein LOC100251997 [Vitis vinifera]
gi|297740629|emb|CBI30811.3| unnamed protein product
[Vitis vinifera]
Length = 665
Score = 594 bits (1531), Expect = e-167
Identities = 306/521 (58%), Positives = 401/521 (76%), Gaps = 4/521 (0%)
Frame = +1
Query: 1 GIDTVEKAKQLIGSTLLVMEEDRPVLEEGEFYTRDLVGMKVILKDTGLSVGTVVNVFNSG 180
GIDTVE+AKQL+GS+LLV E+DRP LEEGEFY+RDL+GM+V LK+TG VGTVVNVF++G
Sbjct: 147 GIDTVEEAKQLVGSSLLVREDDRPELEEGEFYSRDLLGMRVTLKETGEPVGTVVNVFSTG 206
Query: 181 GPNDLLQVMLNSSDEAHDATGSSEAGPGVSGHLAWVPFVKAIVPDVDMNRREMRITPPKG 360
NDLLQVML+ S + D TG+ ++ GVSG L WVPFV+AIVP+VDMN+REM+ITPPKG
Sbjct: 207 A-NDLLQVMLDPSVKTPDHTGNPKSETGVSGPLVWVPFVEAIVPNVDMNKREMQITPPKG 265
Query: 361 LLELNLRSDIRSKKERRQLEWKERKKASRRLIAAKKKLSEMEQKHIFHGLRFGEKAQRNL 540
LLELNLRS RSKKERRQLEWK+R+K RRLIAAKKKL EMEQ+H+FHG RFG+KAQR+L
Sbjct: 266 LLELNLRSHERSKKERRQLEWKQRRKFQRRLIAAKKKLHEMEQQHVFHGFRFGQKAQRSL 325
Query: 541 LADHIVGINFKLFQDALQNFETVTTRWNLSEFISAYSTKLLENPIKVSEECLISCGTKDN 720
LAD IVG+N KL Q ALQN E + RW+ SEFIS TKL + +KVS++CL + G+++
Sbjct: 326 LADQIVGVNSKLLQQALQNIELSSQRWSSSEFISTKLTKLGQRTLKVSKKCLTTPGSEEK 385
Query: 721 MDATEGMKIKGLNMISEGKAAIVLVVGDQTSQGRFSNLEQGDSGRAENSSNISHIQALLN 900
+D+ ++ KGL+++S+GK AIVL V D GR S E DS A NS+ S +Q LL+
Sbjct: 386 LDSNFELQEKGLHLMSKGKMAIVLFVNDSEKHGRCSVPELVDSESAGNST--SFLQTLLS 443
Query: 901 DE----LEGDCGFLPLVMVSPAHETQAIQQSFLDHDYFSFNTDKVWFLEEENLPVVSNSV 1068
D+ + D +PL+MVSPAHE +++ F +HD+F+F+ KVWFLE+E LPVVSNS+
Sbjct: 444 DDRISLKKEDRVSVPLIMVSPAHEVHSLENLFSNHDHFAFDPKKVWFLEDEKLPVVSNSL 503
Query: 1069 EEEHRHKVLMKSQWEILQSPVGSGGIFSLLSSHTILEDLNEMGVEYVQVCSLGKRSIVGN 1248
E+ K+LMKS WEILQ+ VGSGG+ SLLSS IL++L+EMGVEY+++CS+ + + G+
Sbjct: 504 GGENTQKILMKSPWEILQTSVGSGGVISLLSSENILDNLSEMGVEYIEICSVNEEFVSGH 563
Query: 1249 PLFFGYVKSREADLGIKICKSNGESEDDFNVIFSLKYLKKITKQSDKLKFHAITKQNSHV 1428
L G V S E+D+GI+I + + E++F++IFS+K++ K+ KQ KL+FH I K NSHV
Sbjct: 564 SL-LGLVSSLESDVGIQISEGIEDIEENFHMIFSMKFMSKLAKQMKKLQFHGIPKLNSHV 622
Query: 1429 EMIDKEWVDVVPQSPNSYELHCSICSSLSVCPPDRICVMEV 1551
EM++KEWVDV P SPNS EL CSI SSL+ C D++CV+E+
Sbjct: 623 EMVEKEWVDVTPTSPNSLELGCSIYSSLNACSLDKVCVVEI 663
>ref|XP_002331856.1| predicted protein [Populus trichocarpa] gi|222875374|gb|EEF12505.1|
predicted protein [Populus trichocarpa]
Length = 673
Score = 582 bits (1499), Expect = e-163
Identities = 303/523 (57%), Positives = 400/523 (76%), Gaps = 5/523 (0%)
Frame = +1
Query: 1 GIDTVEKAKQLIGSTLLVMEEDRPVLEEGEFYTRDLVGMKVILKDTGLSVGTVVNVFNSG 180
GIDTV++AK L+GSTLLV E +RP LEEGEFY+RDL+GM+VILK+TG VGTVVNVF++G
Sbjct: 154 GIDTVDRAKLLVGSTLLVREYERPELEEGEFYSRDLIGMRVILKETGECVGTVVNVFDNG 213
Query: 181 GPNDLLQVMLNSSDEAHDATGSSE-AGPGVSGHLAWVPFVKAIVPDVDMNRREMRITPPK 357
G NDLLQVML +S + TG S+ A GVSGHLAWVPFV+AIVPDV+MN REMRITPPK
Sbjct: 214 G-NDLLQVMLYTSSDVPGGTGKSKPAEAGVSGHLAWVPFVEAIVPDVNMNEREMRITPPK 272
Query: 358 GLLELNLRSDIRSKKERRQLEWKERKKASRRLIAAKKKLSEMEQKHIFHGLRFGEKAQRN 537
GLLELNLR D RSKKERR+LEW+ERKK RRLIAAKKKL EMEQKH+F GLR+G+K++R
Sbjct: 273 GLLELNLRQDERSKKERRELEWRERKKFQRRLIAAKKKLCEMEQKHVFDGLRYGDKSKRG 332
Query: 538 LLADHIVGINFKLFQDALQNFETVTTRWNLSEFISAYSTKLLENPIKVSEECLISCGTKD 717
LLAD IVG+N KL Q AL+N E + R + +E ISA TK +++ + +S+E I+C ++
Sbjct: 333 LLADQIVGVNSKLLQQALENIEISSKRCSATELISATRTKHIKSSLMISKE-FITCANEE 391
Query: 718 NMDATEGMKIKGLNMISEGKAAIVLVVGDQTSQGRFSNLEQGDSGRAENSSNISHIQALL 897
+ A ++ KGL++IS GK AIVLV+ D +G+ N DS +ENS + +Q L
Sbjct: 392 KLGANFKLQEKGLSLISTGKVAIVLVLND-IEKGKGDNPGVVDSESSENSL-LFFLQKSL 449
Query: 898 NDELE----GDCGFLPLVMVSPAHETQAIQQSFLDHDYFSFNTDKVWFLEEENLPVVSNS 1065
+D+ D +PL++V PA E Q++Q+ F ++DYF+F+++KVWFLEEE +PVVS+S
Sbjct: 450 SDDQTFVKIEDRVSVPLILVCPAQEIQSLQKLFSNNDYFAFDSNKVWFLEEEKIPVVSSS 509
Query: 1066 VEEEHRHKVLMKSQWEILQSPVGSGGIFSLLSSHTILEDLNEMGVEYVQVCSLGKRSIVG 1245
EE RHK++MKS WEILQSPVGSGG+ SLLSS I E+L++MGVEY+++CS + + G
Sbjct: 510 EEEGKRHKIMMKSPWEILQSPVGSGGVISLLSSVNIPENLSKMGVEYIEICSSSQNCVTG 569
Query: 1246 NPLFFGYVKSREADLGIKICKSNGESEDDFNVIFSLKYLKKITKQSDKLKFHAITKQNSH 1425
+PL G+V+SR+A++GIKI + + E+ F++IFSL +++ + +Q KL+F+AI K N H
Sbjct: 570 SPLLLGFVESRKAEIGIKIVEDTKDLEESFDMIFSLNFMRLLAQQIHKLQFYAIPKPNLH 629
Query: 1426 VEMIDKEWVDVVPQSPNSYELHCSICSSLSVCPPDRICVMEVT 1554
VEM+ KEWVDVVP SPNSYEL SI SSL+ CP ++ICVME+T
Sbjct: 630 VEMVGKEWVDVVPSSPNSYELRSSIYSSLNACPLEKICVMEIT 672
>ref|XP_002519751.1| conserved hypothetical protein [Ricinus communis]
gi|223541168|gb|EEF42724.1| conserved hypothetical
protein [Ricinus communis]
Length = 631
Score = 578 bits (1491), Expect = e-162
Identities = 297/523 (56%), Positives = 392/523 (74%), Gaps = 5/523 (0%)
Frame = +1
Query: 1 GIDTVEKAKQLIGSTLLVMEEDRPVLEEGEFYTRDLVGMKVILKDTGLSVGTVVNVFNSG 180
GIDTVE+A+QL+GSTLLV E+DRP LEEG+FYTRDLVGM+VILK+TG VGTVVNVF+SG
Sbjct: 110 GIDTVEQARQLVGSTLLVREDDRPELEEGDFYTRDLVGMRVILKETGQCVGTVVNVFDSG 169
Query: 181 GPNDLLQVMLNSSDEAHDATGS-SEAGPGVSGHLAWVPFVKAIVPDVDMNRREMRITPPK 357
DLLQVML ++ + T A GVS L WVPFV+AIVPDVDM +REM ITPPK
Sbjct: 170 A-GDLLQVMLCPTEGVPEGTEKLMTAETGVSSPLVWVPFVEAIVPDVDMTKREMWITPPK 228
Query: 358 GLLELNLRSDIRSKKERRQLEWKERKKASRRLIAAKKKLSEMEQKHIFHGLRFGEKAQRN 537
GLL+LN+RSD RSKKERRQLEWKERKK RRLIAAKKKL EMEQKH+F GLR+GEK QR+
Sbjct: 229 GLLKLNIRSDERSKKERRQLEWKERKKFQRRLIAAKKKLCEMEQKHVFDGLRYGEKPQRS 288
Query: 538 LLADHIVGINFKLFQDALQNFETVTTRWNLSEFISAYSTKLLENPIKVSEECLISCGTKD 717
LAD IVG+N KL Q ALQN RW ++E ISA TKL++ +K+S++CL C T++
Sbjct: 289 SLADQIVGVNSKLLQQALQNIGISFQRWGITELISATRTKLIQRSLKLSKKCLTPCATEE 348
Query: 718 NMDATEGMKIKGLNMISEGKAAIVLVVGDQTSQGRFSNLEQGDSGRAENSSNISHIQALL 897
++ A M+ KGLN++S GK IVLVV + G + + D+ +E+ + S +Q L
Sbjct: 349 SLTAYFDMQDKGLNLLSTGKVGIVLVVNEVDKNGTSHSPDVVDTKNSEDLA-FSLLQKSL 407
Query: 898 NDELE----GDCGFLPLVMVSPAHETQAIQQSFLDHDYFSFNTDKVWFLEEENLPVVSNS 1065
+D+ D F+PLV+V P E +++++ F D+DYF F+TDKVWFLEEE LPVV++S
Sbjct: 408 SDDQSFLKMEDRAFVPLVLVCPMQEIRSLKKLFSDNDYFGFDTDKVWFLEEEKLPVVNSS 467
Query: 1066 VEEEHRHKVLMKSQWEILQSPVGSGGIFSLLSSHTILEDLNEMGVEYVQVCSLGKRSIVG 1245
EE R K+LMKS WEILQ PVGSGG+ SLLS+H I E LN+M V+Y++VCS+G+ +++G
Sbjct: 468 YEEPSRCKILMKSPWEILQVPVGSGGVISLLSTHGIPEILNKMDVKYIEVCSVGQNNVLG 527
Query: 1246 NPLFFGYVKSREADLGIKICKSNGESEDDFNVIFSLKYLKKITKQSDKLKFHAITKQNSH 1425
N L GYV S +A++G++I + SE+ F++IFS +K++T++ DKL+FH I+K NS+
Sbjct: 528 NALLLGYVNSCKAEIGLQIFEDTEGSEESFDMIFSNSSMKRLTEEMDKLQFHTISKPNSY 587
Query: 1426 VEMIDKEWVDVVPQSPNSYELHCSICSSLSVCPPDRICVMEVT 1554
VE++DKEW D++P SPNSY+ + SI S+L+ CP D+ICV+E+T
Sbjct: 588 VELVDKEWTDIIPSSPNSYQFYSSIYSALNGCPLDKICVIEIT 630
>ref|XP_003629892.1| Ribosome maturation factor rimM [Medicago truncatula]
gi|355523914|gb|AET04368.1| Ribosome maturation factor
rimM [Medicago truncatula]
Length = 667
Score = 509 bits (1312), Expect = e-142
Identities = 270/532 (50%), Positives = 375/532 (70%), Gaps = 15/532 (2%)
Frame = +1
Query: 1 GIDTVEKAKQLIGSTLLVMEEDRPVLEEGEFYTRDLVGMKVILKDTGLSVGTVVNVFNSG 180
GID+ E+AK LIG+TLLV EEDRP LEEGEFYT DL GM+V +K+ G +GTV+NVFN+G
Sbjct: 137 GIDSAEEAKILIGATLLVTEEDRPELEEGEFYTHDLNGMRVFMKENGKLLGTVINVFNNG 196
Query: 181 GPNDLLQVMLNSSDEAHDATGSSEAGP-GVSGHLAWVPFVKAIVPDVDMNRREMRITPPK 357
NDLLQ+ L+SS + D G + SG L VPFV+AIVPDVDMNRREM ITPPK
Sbjct: 197 A-NDLLQISLDSSFDVLDKNGKPKPEEIEASGQLVLVPFVEAIVPDVDMNRREMHITPPK 255
Query: 358 GLLELNLRSDIRSKKERRQLEWKERKKASRRLIAAKKKLSEMEQKHIFHGLRFGEKAQRN 537
GLLELNLR D RSKKERRQLEWKERKK +RLIAAKKKL EM+Q+H+FHG + GEK Q +
Sbjct: 256 GLLELNLRFDDRSKKERRQLEWKERKKFQKRLIAAKKKLREMDQQHVFHGFQCGEKEQWS 315
Query: 538 LLADHIVGINFKLFQDALQNFETVTTRWNLSEFISAYSTKLLENPIKVSEECLISCGTKD 717
LL+D IVG+N +L Q+ALQ+ E RWN +E +SA K + +++SE L++
Sbjct: 316 LLSDQIVGVNSRLLQEALQSLEQPANRWNAAELVSAMEEKRIRT-VQISERSLLTGSKTK 374
Query: 718 NMDATEGMKIKGLNMISEGKAAIVLVVGDQTSQGRFSNLEQGDSGRAENSSNISHIQALL 897
+ MK KG+ +IS GK AIVL++ ++ ++G + E ++ A +S + +Q LL
Sbjct: 375 LVRNIINMKEKGVELISNGKMAIVLLLKEKENEGCIYDPEVVEN-EATETSTLHMLQNLL 433
Query: 898 NDELE----GDCGFLPLVMVSPAHETQAIQQSFLDHDYFSFNTDKV----------WFLE 1035
+D + D +PL++VS A + Q+++ F +++F+F+++KV WFLE
Sbjct: 434 SDHEKFVKVNDRVSVPLILVSSAQQIQSLRNLFTRNNHFAFDSEKVHIISSTFPFVWFLE 493
Query: 1036 EENLPVVSNSVEEEHRHKVLMKSQWEILQSPVGSGGIFSLLSSHTILEDLNEMGVEYVQV 1215
EE LPVVS+S+E ++++K+LMKS WEILQSPVGSGG SL S H+I ++L MGVEY+++
Sbjct: 494 EEKLPVVSSSLEGQNKYKILMKSPWEILQSPVGSGGFISLFSKHSITDNLINMGVEYLEL 553
Query: 1216 CSLGKRSIVGNPLFFGYVKSREADLGIKICKSNGESEDDFNVIFSLKYLKKITKQSDKLK 1395
C +RS+ GN L G V +REA +GI+I + + +++F++I S++++KK+TKQS KL+
Sbjct: 554 CCPCERSVGGNSLLVGLVDAREAKIGIQISPTIADPDENFDMILSMEFVKKLTKQSYKLR 613
Query: 1396 FHAITKQNSHVEMIDKEWVDVVPQSPNSYELHCSICSSLSVCPPDRICVMEV 1551
F A K NS +E +DK+WV V +PNSYEL CS+ SSL+ CP D++C++EV
Sbjct: 614 FDATAKTNSFIESVDKDWVTVTSSTPNSYELSCSVYSSLNACPLDKVCIVEV 665
>dbj|BAE71246.1| hypothetical protein [Trifolium pratense]
Length = 669
Score = 488 bits (1257), Expect = e-135
Identities = 265/524 (50%), Positives = 370/524 (70%), Gaps = 7/524 (1%)
Frame = +1
Query: 1 GIDTVEKAKQLIGSTLLVMEEDRPVLEEGEFYTRDLVGMKVILKDTGLSVGTVVNVFNSG 180
GI++VE+AK LIG+TLLV EED+P LE+GEFY DL GM+V +K+ G +GTV+NVFN+G
Sbjct: 148 GIESVEEAKMLIGATLLVTEEDKPELEDGEFYAHDLNGMRVFMKENGKLLGTVINVFNTG 207
Query: 181 GPNDLLQVMLNSSDEAHDATGSSEAGP-GVSGHLAWVPFVKAIVPDVDMNRREMRITPPK 357
NDLLQ+ L+SS + D G + SG L +PFV+AIV DVDMN+REM ITPPK
Sbjct: 208 A-NDLLQISLDSSFDVLDKNGQPKPEEIDASGQLVLLPFVEAIVSDVDMNKREMHITPPK 266
Query: 358 GLLELNLRSDIRSKKERRQLEWKERKKASRRLIAAKKKLSEMEQKHIFHGLRFGEKAQRN 537
GLLE+NLR D +SKKERRQLEWKE+KK RRLIAAKKKL EM+Q+H+FHG + GEK Q +
Sbjct: 267 GLLEINLRFDDKSKKERRQLEWKEKKKFQRRLIAAKKKLCEMDQQHVFHGYQCGEKEQWS 326
Query: 538 LLADHIVGINFKLFQDALQNFETVTTRWNLSEFISAYSTKLLENPIKVSEECLISCGTKD 717
LL+D IVG+N +L QDALQ+ + RWN +E +SA K + + +K+SE+ L++ G+KD
Sbjct: 327 LLSDQIVGVNSRLLQDALQSLQQPAKRWNAAELVSAVQEKHI-STLKISEKSLLT-GSKD 384
Query: 718 NMDAT-EGMKIKGLNMISEGKAAIVLVVGDQTSQGRFSNLEQGDSGRAENSSNISHIQAL 894
+ M+ KGL +IS+GK AIVL++ ++ ++G + + +S EN + + +Q L
Sbjct: 385 KLVRNIIKMQEKGLELISKGKMAIVLLLNEKENEGCIYDPDVVESEATENPT-LLMLQNL 443
Query: 895 LNDELE----GDCGFLPLVMVSPAHETQAIQQSFLDHDYFSFNTDKVWFLEEENLPVVSN 1062
L D + D +PL++VS A + Q+++ F +++F F+++KVWFLEEE LPVVS
Sbjct: 444 LCDHDKFVKVKDRLSVPLILVSSAQQLQSLRNLFARNNHFEFDSEKVWFLEEEKLPVVSR 503
Query: 1063 SVEEEHRHKVLMKSQWEILQSPVGSGGIFSLLSSHTILEDLNEMGVEYVQVCSLGKRSIV 1242
S+ EE+++K+LMKS WEILQSPVGSGG L + H+I ++L MGVEYV+VC + ++
Sbjct: 504 SLGEENKYKILMKSPWEILQSPVGSGGFIDLFTKHSIADNLINMGVEYVEVCCPCETTVG 563
Query: 1243 GNPLFFGYVKSREADLGIKICKSNGESEDDFNVIFSLKYLKKITKQSDK-LKFHAITKQN 1419
GN G V SREA +GI+I +++F++I S+ +KK+TKQS K L+F A K +
Sbjct: 564 GNSQLLGLVNSREAKIGIQISPKIVVPDENFDMILSMDLVKKLTKQSYKLLQFDATPKIS 623
Query: 1420 SHVEMIDKEWVDVVPQSPNSYELHCSICSSLSVCPPDRICVMEV 1551
S VE +DK+WV + PNSYEL CSI SSL+ CP D++C++EV
Sbjct: 624 SFVENVDKDWVTITSSIPNSYELSCSIYSSLNACPLDKVCIVEV 667