BLASTX nr result

ID: Coptis24_contig00011956 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00011956
         (1259 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI30773.3| unnamed protein product [Vitis vinifera]              381   e-103
ref|XP_002267059.1| PREDICTED: uncharacterized protein LOC100267...   381   e-103
ref|XP_002531244.1| conserved hypothetical protein [Ricinus comm...   369   e-100
ref|XP_004146014.1| PREDICTED: uncharacterized protein LOC101204...   362   1e-97
gb|AEV43359.1| structural maintenance of chromosomes domain-cont...   350   3e-94

>emb|CBI30773.3| unnamed protein product [Vitis vinifera]
          Length = 383

 Score =  381 bits (979), Expect = e-103
 Identities = 199/307 (64%), Positives = 235/307 (76%), Gaps = 10/307 (3%)
 Frame = +1

Query: 103 GQLKGPPM------HEPQF-GR---PMPHPALLEEMREAQFGRXXXXXXXXXXXXXXXXX 252
           G+ +GPPM      HEP F GR   PMPHPALL+E    QFGR                 
Sbjct: 79  GRNRGPPMPIKGGLHEPPFRGRGLGPMPHPALLDE---PQFGRGAGGPRPGTLIPHPAAI 135

Query: 253 XIEERLAGQHQEIQGLLVDNQRLAATHVALQQEVEAAHLELKRMSHIAGSMRAEKDVQLR 432
             E+RLA QHQ+IQ LL+DNQRLAATHVAL+QEVEAA  E+KRM+H+A S + E D+QLR
Sbjct: 136 -FEDRLALQHQDIQALLIDNQRLAATHVALKQEVEAAQHEIKRMAHVAASAQTEMDLQLR 194

Query: 433 EVYEKSMKMEADLHGVEAMKAELGKVRNDVQKLSAGRQELTVQVQGLTQELTRANADLQQ 612
           E +EK MK+EADL   +AM+AE+ +VR D+Q+L+A RQELT Q +GL+Q+L RAN DLQQ
Sbjct: 195 EAFEKVMKLEADLRASDAMRAEVMQVRADIQQLTAARQELTSQAEGLSQDLNRANLDLQQ 254

Query: 613 VPALKADVETMKQELERARAAIEYERKGHAENYEQGQAMEKNLILMAREVEKLRAEVANA 792
           VP LK ++E M+QEL+RARAAIEYE+KG+AENYE GQAMEKNLI MARE+EKLRAE+ANA
Sbjct: 255 VPLLKGEIEGMRQELQRARAAIEYEKKGYAENYEHGQAMEKNLIAMAREMEKLRAELANA 314

Query: 793 EKRVRATAAVGNQGYGGTYNNPQTGYAGNPYSSGYGMNPVQGGAEGAPQYGPGPGAWSAY 972
           EKR RA AAVGNQ YGG+Y NP+TGY GNPY +GYGMNP QG AEG PQYGPGPG+W  Y
Sbjct: 315 EKRARAAAAVGNQIYGGSYGNPETGYGGNPYPAGYGMNPGQGSAEGVPQYGPGPGSWGTY 374

Query: 973 DMQRAPG 993
           DMQRA G
Sbjct: 375 DMQRAHG 381


>ref|XP_002267059.1| PREDICTED: uncharacterized protein LOC100267569 [Vitis vinifera]
           gi|147835469|emb|CAN63248.1| hypothetical protein
           VITISV_022231 [Vitis vinifera]
          Length = 307

 Score =  381 bits (979), Expect = e-103
 Identities = 199/307 (64%), Positives = 235/307 (76%), Gaps = 10/307 (3%)
 Frame = +1

Query: 103 GQLKGPPM------HEPQF-GR---PMPHPALLEEMREAQFGRXXXXXXXXXXXXXXXXX 252
           G+ +GPPM      HEP F GR   PMPHPALL+E    QFGR                 
Sbjct: 3   GRNRGPPMPIKGGLHEPPFRGRGLGPMPHPALLDE---PQFGRGAGGPRPGTLIPHPAAI 59

Query: 253 XIEERLAGQHQEIQGLLVDNQRLAATHVALQQEVEAAHLELKRMSHIAGSMRAEKDVQLR 432
             E+RLA QHQ+IQ LL+DNQRLAATHVAL+QEVEAA  E+KRM+H+A S + E D+QLR
Sbjct: 60  -FEDRLALQHQDIQALLIDNQRLAATHVALKQEVEAAQHEIKRMAHVAASAQTEMDLQLR 118

Query: 433 EVYEKSMKMEADLHGVEAMKAELGKVRNDVQKLSAGRQELTVQVQGLTQELTRANADLQQ 612
           E +EK MK+EADL   +AM+AE+ +VR D+Q+L+A RQELT Q +GL+Q+L RAN DLQQ
Sbjct: 119 EAFEKVMKLEADLRASDAMRAEVMQVRADIQQLTAARQELTSQAEGLSQDLNRANLDLQQ 178

Query: 613 VPALKADVETMKQELERARAAIEYERKGHAENYEQGQAMEKNLILMAREVEKLRAEVANA 792
           VP LK ++E M+QEL+RARAAIEYE+KG+AENYE GQAMEKNLI MARE+EKLRAE+ANA
Sbjct: 179 VPLLKGEIEGMRQELQRARAAIEYEKKGYAENYEHGQAMEKNLIAMAREMEKLRAELANA 238

Query: 793 EKRVRATAAVGNQGYGGTYNNPQTGYAGNPYSSGYGMNPVQGGAEGAPQYGPGPGAWSAY 972
           EKR RA AAVGNQ YGG+Y NP+TGY GNPY +GYGMNP QG AEG PQYGPGPG+W  Y
Sbjct: 239 EKRARAAAAVGNQIYGGSYGNPETGYGGNPYPAGYGMNPGQGSAEGVPQYGPGPGSWGTY 298

Query: 973 DMQRAPG 993
           DMQRA G
Sbjct: 299 DMQRAHG 305


>ref|XP_002531244.1| conserved hypothetical protein [Ricinus communis]
           gi|223529163|gb|EEF31141.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 315

 Score =  369 bits (948), Expect = e-100
 Identities = 198/317 (62%), Positives = 234/317 (73%), Gaps = 17/317 (5%)
 Frame = +1

Query: 94  RNRGQ---LKG--------PPMHEPQFGR---PMP-HPALLEEMREAQFGRXXXXXXXXX 228
           RNRG    +KG        P +HEP FGR   PMP HPALLEE+RE+QFG          
Sbjct: 4   RNRGPPLPMKGVTPHGGMPPVIHEPHFGRGLGPMPPHPALLEELRESQFG-------LDP 56

Query: 229 XXXXXXXXXIEERLAGQHQEIQGLLVDNQRLAATHVALQQEVEAAHLELKRMSHIAGSMR 408
                    +EERLA QHQ+IQGLL DNQR +ATHVAL+QE+EAAH EL+RM+H   S+ 
Sbjct: 57  RRLPPHPAVMEERLAVQHQDIQGLLADNQRFSATHVALKQELEAAHHELERMAHYGNSLH 116

Query: 409 AEKDVQLREVYEKSMKMEADLHGVEAMKAELGKVRNDVQKLSAGRQELTVQVQGLTQELT 588
            EKDVQ+RE++EKSM++EADL  VEAM+AEL  VR D+++LS  RQELT +VQ +TQ+L 
Sbjct: 117 VEKDVQMRELHEKSMRLEADLREVEAMRAELHHVRADIKELSEVRQELTGRVQMMTQDLA 176

Query: 589 RANADLQQVPALKADVETMKQELERARAAIEYERKGHAENYEQGQAMEKNLILMAREVEK 768
           R NADLQQVPA+KAD+E+MKQ+L+ ARAAI+YE+KG+AENYE GQ MEK LI MARE+EK
Sbjct: 177 RYNADLQQVPAVKADIESMKQQLQHARAAIDYEKKGYAENYEHGQVMEKKLIAMARELEK 236

Query: 769 LRAEVANAEKRVRATAAVGNQG--YGGTYNNPQTGYAGNPYSSGYGMNPVQGGAEGAPQY 942
           LRAE+ANAEKR RA  AVGN G  Y   Y N + GYAGNPY  GYGMNPVQ  AE  PQY
Sbjct: 237 LRAEIANAEKRARAAVAVGNPGATYNANYGNSEAGYAGNPYPIGYGMNPVQANAESYPQY 296

Query: 943 GPGPGAWSAYDMQRAPG 993
           G GPG+W AYDMQRA G
Sbjct: 297 GVGPGSWGAYDMQRAQG 313


>ref|XP_004146014.1| PREDICTED: uncharacterized protein LOC101204235 [Cucumis sativus]
           gi|449503648|ref|XP_004162107.1| PREDICTED:
           uncharacterized LOC101204235 [Cucumis sativus]
          Length = 313

 Score =  362 bits (929), Expect = 1e-97
 Identities = 183/298 (61%), Positives = 224/298 (75%), Gaps = 6/298 (2%)
 Frame = +1

Query: 118 PPMHEPQFGR---PMPHPALLEEMREAQFGRXXXXXXXXXXXXXXXXXXIEERLAGQHQE 288
           PP+ EP F R   P+PHP LLEE+RE+Q+G                   IEERLA QHQ+
Sbjct: 21  PPVREPPFARGLGPLPHPVLLEEIRESQYGMHPVSLPPHPAI-------IEERLAAQHQD 73

Query: 289 IQGLLVDNQRLAATHVALQQEVEAAHLELKRMSHIAGSMRAEKDVQLREVYEKSMKMEAD 468
           IQGLL+DNQRLAATHVAL+QE+EAA  EL+RM+H+A S+ AE+D+Q+RE+YEKS+++E D
Sbjct: 74  IQGLLLDNQRLAATHVALKQELEAAQHELQRMAHVADSLHAERDIQMRELYEKSVRLEVD 133

Query: 469 LHGVEAMKAELGKVRNDVQKLSAGRQELTVQVQGLTQELTRANADLQQVPALKADVETMK 648
           + GVE M+AEL +V +DV++L+A RQEL  QVQ +TQ+LTR  ADLQQVPAL+ ++ET+K
Sbjct: 134 MRGVETMRAELLQVHSDVKELTAARQELNGQVQAMTQDLTRITADLQQVPALRGEIETVK 193

Query: 649 QELERARAAIEYERKGHAENYEQGQAMEKNLILMAREVEKLRAEVANAEKRVRATAAVGN 828
           QEL RAR AIEYE+KG+AENYE GQ MEK L+ MARE+EKLRAEVANAEKR  A+AAVG 
Sbjct: 194 QELHRARVAIEYEKKGYAENYEHGQVMEKKLVSMARELEKLRAEVANAEKRAHASAAVGG 253

Query: 829 Q---GYGGTYNNPQTGYAGNPYSSGYGMNPVQGGAEGAPQYGPGPGAWSAYDMQRAPG 993
               GYG  Y N   GY GNPYS+ YG+N VQ G EG P YGPG   W AYD+QRA G
Sbjct: 254 NAAAGYGANYGNADAGYGGNPYSTNYGLNSVQSGTEGYPPYGPGSVPWGAYDIQRAQG 311


>gb|AEV43359.1| structural maintenance of chromosomes domain-containing protein
           [Citrus sinensis]
          Length = 302

 Score =  350 bits (899), Expect = 3e-94
 Identities = 191/314 (60%), Positives = 227/314 (72%), Gaps = 14/314 (4%)
 Frame = +1

Query: 94  RNRGQ---LKGPP-------MHEPQFGR---PMP-HPALLEEMREAQFGRXXXXXXXXXX 231
           RNRG    +KG P       +HEPQFGR   PMP HPALLEEMRE QFG           
Sbjct: 4   RNRGPPLPMKGAPPVGLPLPVHEPQFGRGLGPMPPHPALLEEMRETQFGMGPRPLPPTHP 63

Query: 232 XXXXXXXXIEERLAGQHQEIQGLLVDNQRLAATHVALQQEVEAAHLELKRMSHIAGSMRA 411
                   IEERLA QHQ+IQGLL DNQRLAATHVAL+QE+E A  EL+RM H A S R 
Sbjct: 64  AI------IEERLAAQHQDIQGLLADNQRLAATHVALKQELEVAQYELQRMVHYADSFRM 117

Query: 412 EKDVQLREVYEKSMKMEADLHGVEAMKAELGKVRNDVQKLSAGRQELTVQVQGLTQELTR 591
           +KDVQ+RE+Y+KS+++E DL GVEAM++EL KV+ D+++L+A RQELT Q Q ++Q+L R
Sbjct: 118 DKDVQMREMYDKSVQLEVDLRGVEAMRSELLKVQADIKELTAVRQELTGQAQMMSQDLVR 177

Query: 592 ANADLQQVPALKADVETMKQELERARAAIEYERKGHAENYEQGQAMEKNLILMAREVEKL 771
             ADLQQVPALKA++E +KQEL+RARAAIE+++KG+AENYE GQ MEK LI MARE+EKL
Sbjct: 178 LTADLQQVPALKAEIENVKQELQRARAAIEFDKKGYAENYEHGQVMEKKLISMARELEKL 237

Query: 772 RAEVANAEKRVRATAAVGNQGYGGTYNNPQTGYAGNPYSSGYGMNPVQGGAEGAPQYGPG 951
           RAE+AN+EKR RA AAVGN           +GY  NPY   Y MNPVQ GAE  P YGPG
Sbjct: 238 RAEIANSEKRARAAAAVGN-----------SGYPSNPYPVSYSMNPVQAGAETYPHYGPG 286

Query: 952 PGAWSAYDMQRAPG 993
           PG+W AYDMQRA G
Sbjct: 287 PGSWGAYDMQRAQG 300


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