BLASTX nr result

ID: Coptis24_contig00011955 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00011955
         (904 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003554757.1| PREDICTED: LOW QUALITY PROTEIN: probable UDP...   115   2e-40
ref|XP_003521799.1| PREDICTED: probable UDP-sugar transporter pr...   115   1e-39
ref|XP_004160825.1| PREDICTED: CMP-sialic acid transporter 1-lik...   113   5e-39
ref|XP_002532660.1| cmp-sialic acid transporter, putative [Ricin...   110   8e-39
ref|XP_004140889.1| PREDICTED: CMP-sialic acid transporter 1-lik...   113   2e-38

>ref|XP_003554757.1| PREDICTED: LOW QUALITY PROTEIN: probable UDP-sugar transporter
           protein SLC35A4-like [Glycine max]
          Length = 335

 Score =  115 bits (289), Expect(2) = 2e-40
 Identities = 52/56 (92%), Positives = 55/56 (98%)
 Frame = -2

Query: 903 GGFENGPWWQRLFNGYNMTTWMVVLNLGSTGLLVSWLMKYADNIVKVYSTSMAMLL 736
           GGFENGPWWQR+FNGY +TTWMVVLNLGSTGLLVSWLMK+ADNIVKVYSTSMAMLL
Sbjct: 217 GGFENGPWWQRIFNGYTITTWMVVLNLGSTGLLVSWLMKHADNIVKVYSTSMAMLL 272



 Score = 77.0 bits (188), Expect(2) = 2e-40
 Identities = 36/49 (73%), Positives = 40/49 (81%)
 Frame = -3

Query: 629 NFKPTLQLFLGIVICMMSLHMYFAPASMLVDLPVAAKTDLESLNNVSVD 483
           NFKPTLQLFLGI+ICMMSLHMYFAP +ML+D+P   K D E L  VSVD
Sbjct: 282 NFKPTLQLFLGIIICMMSLHMYFAPPNMLLDMPXTVKPDEEKLIEVSVD 330


>ref|XP_003521799.1| PREDICTED: probable UDP-sugar transporter protein SLC35A4-like
           [Glycine max]
          Length = 335

 Score =  115 bits (289), Expect(2) = 1e-39
 Identities = 52/56 (92%), Positives = 55/56 (98%)
 Frame = -2

Query: 903 GGFENGPWWQRLFNGYNMTTWMVVLNLGSTGLLVSWLMKYADNIVKVYSTSMAMLL 736
           GGFENGPWWQR+FNGY +TTWMVVLNLGSTGLLVSWLMK+ADNIVKVYSTSMAMLL
Sbjct: 217 GGFENGPWWQRIFNGYTITTWMVVLNLGSTGLLVSWLMKHADNIVKVYSTSMAMLL 272



 Score = 74.7 bits (182), Expect(2) = 1e-39
 Identities = 34/49 (69%), Positives = 40/49 (81%)
 Frame = -3

Query: 629 NFKPTLQLFLGIVICMMSLHMYFAPASMLVDLPVAAKTDLESLNNVSVD 483
           NFKPTLQLFLGI+ICMMSLHMYFAP ++L+D P+  K D E L  VS+D
Sbjct: 282 NFKPTLQLFLGIIICMMSLHMYFAPPNLLLDKPLTVKLDEEKLIEVSID 330


>ref|XP_004160825.1| PREDICTED: CMP-sialic acid transporter 1-like [Cucumis sativus]
          Length = 337

 Score =  113 bits (283), Expect(2) = 5e-39
 Identities = 51/56 (91%), Positives = 54/56 (96%)
 Frame = -2

Query: 903 GGFENGPWWQRLFNGYNMTTWMVVLNLGSTGLLVSWLMKYADNIVKVYSTSMAMLL 736
           GGFE GPWWQRL NGY++TTWMVV+NLGSTGLLVSWLMKYADNIVKVYSTSMAMLL
Sbjct: 217 GGFEKGPWWQRLLNGYSVTTWMVVINLGSTGLLVSWLMKYADNIVKVYSTSMAMLL 272



 Score = 74.7 bits (182), Expect(2) = 5e-39
 Identities = 38/51 (74%), Positives = 40/51 (78%), Gaps = 2/51 (3%)
 Frame = -3

Query: 629 NFKPTLQLFLGIVICMMSLHMYFAPASMLVDL--PVAAKTDLESLNNVSVD 483
           NFKPTLQLFLGI++CMMSLHMYFAP  MLVDL  PV    DLESL  VS D
Sbjct: 282 NFKPTLQLFLGIIVCMMSLHMYFAPPQMLVDLPPPVVKSQDLESLIEVSSD 332


>ref|XP_002532660.1| cmp-sialic acid transporter, putative [Ricinus communis]
           gi|223527620|gb|EEF29733.1| cmp-sialic acid transporter,
           putative [Ricinus communis]
          Length = 335

 Score =  110 bits (276), Expect(2) = 8e-39
 Identities = 50/56 (89%), Positives = 53/56 (94%)
 Frame = -2

Query: 903 GGFENGPWWQRLFNGYNMTTWMVVLNLGSTGLLVSWLMKYADNIVKVYSTSMAMLL 736
           GGFE GPWWQRLF+GY +TTWMVVLNLG +GLLVSWLMKYADNIVKVYSTSMAMLL
Sbjct: 217 GGFEKGPWWQRLFSGYTITTWMVVLNLGCSGLLVSWLMKYADNIVKVYSTSMAMLL 272



 Score = 76.6 bits (187), Expect(2) = 8e-39
 Identities = 37/49 (75%), Positives = 40/49 (81%)
 Frame = -3

Query: 629 NFKPTLQLFLGIVICMMSLHMYFAPASMLVDLPVAAKTDLESLNNVSVD 483
           NF PTLQLFLGI+ICMMSLHMYFAP  MLVDLP   K D ESL +VSV+
Sbjct: 282 NFSPTLQLFLGIIICMMSLHMYFAPPGMLVDLPSMGKADPESLIDVSVE 330


>ref|XP_004140889.1| PREDICTED: CMP-sialic acid transporter 1-like [Cucumis sativus]
          Length = 337

 Score =  113 bits (283), Expect(2) = 2e-38
 Identities = 51/56 (91%), Positives = 54/56 (96%)
 Frame = -2

Query: 903 GGFENGPWWQRLFNGYNMTTWMVVLNLGSTGLLVSWLMKYADNIVKVYSTSMAMLL 736
           GGFE GPWWQRL NGY++TTWMVV+NLGSTGLLVSWLMKYADNIVKVYSTSMAMLL
Sbjct: 217 GGFEKGPWWQRLLNGYSVTTWMVVINLGSTGLLVSWLMKYADNIVKVYSTSMAMLL 272



 Score = 72.8 bits (177), Expect(2) = 2e-38
 Identities = 37/51 (72%), Positives = 39/51 (76%), Gaps = 2/51 (3%)
 Frame = -3

Query: 629 NFKPTLQLFLGIVICMMSLHMYFAPASMLVDL--PVAAKTDLESLNNVSVD 483
           NFKPTLQLFLGI++CMMSLHMYFAP  MLVDL  PV    DLESL  V  D
Sbjct: 282 NFKPTLQLFLGIIVCMMSLHMYFAPPQMLVDLPPPVVKSQDLESLIEVPSD 332


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