BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00011947
         (257 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002514900.1| nuclear transport factor, putative [Ricinus ...   131   5e-29
ref|XP_002276841.1| PREDICTED: nuclear transport factor 2 isofor...   130   1e-28
ref|XP_002297847.1| predicted protein [Populus trichocarpa] gi|1...   127   1e-27
ref|XP_002893460.1| hypothetical protein ARALYDRAFT_890252 [Arab...   126   2e-27
ref|NP_174051.1| nuclear transport factor 2A [Arabidopsis thalia...   125   5e-27

>ref|XP_002514900.1| nuclear transport factor, putative [Ricinus communis]
           gi|223545951|gb|EEF47454.1| nuclear transport factor,
           putative [Ricinus communis]
          Length = 123

 Score =  131 bits (330), Expect = 5e-29
 Identities = 61/69 (88%), Positives = 66/69 (95%)
 Frame = +1

Query: 49  MDPDSVAKAFVEHYYSTFDANRGGLANLYQETSMLSFEGQKIQGSQNIVAKLISLPFQQC 228
           MDPD+VAKAFVEHYY+TFDANR GLANLYQE SML+FEGQKIQG+QN+VAKL SLPFQQC
Sbjct: 1   MDPDAVAKAFVEHYYTTFDANRAGLANLYQEASMLTFEGQKIQGAQNVVAKLTSLPFQQC 60

Query: 229 QHSITTVDC 255
           QHSITTVDC
Sbjct: 61  QHSITTVDC 69


>ref|XP_002276841.1| PREDICTED: nuclear transport factor 2 isoform 1 [Vitis vinifera]
           gi|147821626|emb|CAN70316.1| hypothetical protein
           VITISV_001831 [Vitis vinifera]
          Length = 123

 Score =  130 bits (326), Expect = 1e-28
 Identities = 62/69 (89%), Positives = 65/69 (94%)
 Frame = +1

Query: 49  MDPDSVAKAFVEHYYSTFDANRGGLANLYQETSMLSFEGQKIQGSQNIVAKLISLPFQQC 228
           MDPD+VAKAFVEHYYSTFDANR  LANLYQE+SML+FEGQKIQGS NIVAKL SLPFQQC
Sbjct: 1   MDPDAVAKAFVEHYYSTFDANRANLANLYQESSMLTFEGQKIQGSPNIVAKLTSLPFQQC 60

Query: 229 QHSITTVDC 255
           QHSITTVDC
Sbjct: 61  QHSITTVDC 69


>ref|XP_002297847.1| predicted protein [Populus trichocarpa] gi|118483889|gb|ABK93835.1|
           unknown [Populus trichocarpa]
           gi|222845105|gb|EEE82652.1| predicted protein [Populus
           trichocarpa]
          Length = 123

 Score =  127 bits (318), Expect = 1e-27
 Identities = 60/69 (86%), Positives = 64/69 (92%)
 Frame = +1

Query: 49  MDPDSVAKAFVEHYYSTFDANRGGLANLYQETSMLSFEGQKIQGSQNIVAKLISLPFQQC 228
           MDPD VAKAFVEHYYSTFDANR GLANLYQ+ SML+FEGQK QGSQNIVAKLI+LPFQQC
Sbjct: 1   MDPDQVAKAFVEHYYSTFDANRAGLANLYQDGSMLTFEGQKTQGSQNIVAKLIALPFQQC 60

Query: 229 QHSITTVDC 255
           +H ITTVDC
Sbjct: 61  KHLITTVDC 69


>ref|XP_002893460.1| hypothetical protein ARALYDRAFT_890252 [Arabidopsis lyrata subsp.
           lyrata] gi|297339302|gb|EFH69719.1| hypothetical protein
           ARALYDRAFT_890252 [Arabidopsis lyrata subsp. lyrata]
          Length = 122

 Score =  126 bits (317), Expect = 2e-27
 Identities = 60/69 (86%), Positives = 65/69 (94%)
 Frame = +1

Query: 49  MDPDSVAKAFVEHYYSTFDANRGGLANLYQETSMLSFEGQKIQGSQNIVAKLISLPFQQC 228
           MDPD+VAKAFVEHYYSTFDANR GL +LYQE SML+FEGQKIQGSQNIVAKL SLPFQQC
Sbjct: 1   MDPDAVAKAFVEHYYSTFDANRPGLVSLYQEGSMLTFEGQKIQGSQNIVAKLTSLPFQQC 60

Query: 229 QHSITTVDC 255
           +H+ITTVDC
Sbjct: 61  KHNITTVDC 69


>ref|NP_174051.1| nuclear transport factor 2A [Arabidopsis thaliana]
           gi|9802547|gb|AAF99749.1|AC004557_28 F17L21.10
           [Arabidopsis thaliana] gi|14596203|gb|AAK68829.1|
           similar to nuclear transport factor 2 [Arabidopsis
           thaliana] gi|18377444|gb|AAL66888.1| similar to nuclear
           transport factor 2 [Arabidopsis thaliana]
           gi|332192684|gb|AEE30805.1| nuclear transport factor 2A
           [Arabidopsis thaliana]
          Length = 122

 Score =  125 bits (313), Expect = 5e-27
 Identities = 59/69 (85%), Positives = 64/69 (92%)
 Frame = +1

Query: 49  MDPDSVAKAFVEHYYSTFDANRGGLANLYQETSMLSFEGQKIQGSQNIVAKLISLPFQQC 228
           MDPD+VAKAFVEHYYSTFDANR GL +LYQE SML+FEGQKIQGSQNIVAKL  LPFQQC
Sbjct: 1   MDPDAVAKAFVEHYYSTFDANRPGLVSLYQEGSMLTFEGQKIQGSQNIVAKLTGLPFQQC 60

Query: 229 QHSITTVDC 255
           +H+ITTVDC
Sbjct: 61  KHNITTVDC 69