BLASTX nr result
ID: Coptis24_contig00011943
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00011943
(862 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002303377.1| predicted protein [Populus trichocarpa] gi|2... 212 1e-54
ref|XP_003611374.1| hypothetical protein MTR_5g013280 [Medicago ... 160 7e-40
ref|XP_002265335.1| PREDICTED: uncharacterized protein LOC100258... 153 5e-38
ref|XP_002531785.1| conserved hypothetical protein [Ricinus comm... 148 3e-35
ref|XP_004148359.1| PREDICTED: uncharacterized protein LOC101209... 144 2e-34
>ref|XP_002303377.1| predicted protein [Populus trichocarpa] gi|222840809|gb|EEE78356.1|
predicted protein [Populus trichocarpa]
Length = 363
Score = 212 bits (540), Expect(2) = 1e-54
Identities = 113/195 (57%), Positives = 144/195 (73%), Gaps = 1/195 (0%)
Frame = +1
Query: 97 AIKPGVIHRLQSCFVQAMANLMMKFGV-PGLSIGQGNLPDSFTRGMGMKNMSSMQNPLGN 273
A+KPG + ++Q+CF++ + +M K G+ P LSIGQG LP S G+ M SS+QNPLGN
Sbjct: 166 AVKPGAVQKMQACFLEVLMKMMTKLGIAPNLSIGQGALPMSLQSGVSMLTESSIQNPLGN 225
Query: 274 VMPLALNTAELTSQGQPGKLNLDMGSTYKSFASKKTLQDTSFGSRTEKVISGFLQSPLLK 453
+ LA + TSQ G N+ S+ +S SK + DTSFGSRTEKVIS FLQ+P+LK
Sbjct: 226 ITQLARKLPDQTSQSLYGYGNVSSHSSSESSTSKGS--DTSFGSRTEKVISSFLQNPILK 283
Query: 454 DEGETDLNEVAGRLRSENNVLQMVLKHQQVIEALTEENEKLRQILVEELKVPPSKLLGST 633
++G TD+NE+AGRLRSENN+LQMVL+HQQ+IE L EEN+KLRQILVE+LK+PP+KL S
Sbjct: 284 EDG-TDINELAGRLRSENNMLQMVLRHQQIIEELMEENQKLRQILVEDLKIPPNKLQASH 342
Query: 634 SGSNYHSPCLDCFEC 678
S N SPC DCFEC
Sbjct: 343 STIN-KSPCTDCFEC 356
Score = 28.1 bits (61), Expect(2) = 1e-54
Identities = 11/15 (73%), Positives = 14/15 (93%)
Frame = +2
Query: 2 ATDAFSGVGRHVNSS 46
ATDAFSG+ RHVN++
Sbjct: 124 ATDAFSGITRHVNTA 138
>ref|XP_003611374.1| hypothetical protein MTR_5g013280 [Medicago truncatula]
gi|355512709|gb|AES94332.1| hypothetical protein
MTR_5g013280 [Medicago truncatula]
Length = 292
Score = 160 bits (405), Expect(2) = 7e-40
Identities = 92/181 (50%), Positives = 119/181 (65%), Gaps = 1/181 (0%)
Frame = +1
Query: 97 AIKPGVIHRLQSCFVQAMANLMMKFGV-PGLSIGQGNLPDSFTRGMGMKNMSSMQNPLGN 273
A+KPGV++++QSC V M +M+KFG+ P L G LP S G + G+
Sbjct: 101 AVKPGVLNQIQSCLVMTMTKMMIKFGITPSLPFNLGVLPASLQSATGAVSS-------GS 153
Query: 274 VMPLALNTAELTSQGQPGKLNLDMGSTYKSFASKKTLQDTSFGSRTEKVISGFLQSPLLK 453
V LA +A+ SQG G +++G + A K T D+++GSRTEKV++ FLQ+PLLK
Sbjct: 154 VTQLAAKSADQLSQGLAGTQPMNIGLAFDKTAVKDTSVDSTYGSRTEKVLNNFLQNPLLK 213
Query: 454 DEGETDLNEVAGRLRSENNVLQMVLKHQQVIEALTEENEKLRQILVEELKVPPSKLLGST 633
EG E AGRL +EN +LQMVLKHQQ+IE L EENEKLRQILV+ELKVPPSKL S+
Sbjct: 214 GEGGGP-TESAGRLIAENKILQMVLKHQQMIEELVEENEKLRQILVKELKVPPSKLEASS 272
Query: 634 S 636
S
Sbjct: 273 S 273
Score = 30.4 bits (67), Expect(2) = 7e-40
Identities = 13/15 (86%), Positives = 14/15 (93%)
Frame = +2
Query: 2 ATDAFSGVGRHVNSS 46
ATDAFSGV RHVN+S
Sbjct: 59 ATDAFSGVSRHVNTS 73
>ref|XP_002265335.1| PREDICTED: uncharacterized protein LOC100258674 [Vitis vinifera]
Length = 341
Score = 153 bits (387), Expect(2) = 5e-38
Identities = 97/232 (41%), Positives = 125/232 (53%), Gaps = 38/232 (16%)
Frame = +1
Query: 97 AIKPGVIHRLQSCFVQAMANLMMKFGV------------------------PGLS-IGQG 201
A+KPGV+ ++Q C VQ +MMKFG+ P LS GQG
Sbjct: 105 AVKPGVVQKIQYCIVQTTTKMMMKFGILPNIPIGKDIIPPSLSSTVQGIIPPSLSSTGQG 164
Query: 202 NLPDSFTRGMGMKNMSSMQNPLGNVMPLALNTAELTSQGQPGKLNLDMGSTYKSFASKKT 381
L S GM M N S QN G+V+ LA E TS G G + GST + SK +
Sbjct: 165 ILSPSLQSGMSMTNEPSSQNTTGSVLQLATKLVEQTSYGLAGDATSNTGSTSGASTSKSS 224
Query: 382 LQDTSFGSRTEKVISGFLQSPLLKDEGETDLNEVAGRLRSENNVLQMVLKHQQVIEALTE 561
Q TS S+T KV++ L L EG ++NE+A RLRSENN+L ++L H+Q+I+ L E
Sbjct: 225 -QGTSLVSQTGKVVTNILHD-LTSTEGGNEVNELAERLRSENNMLHVILNHEQIIQELKE 282
Query: 562 ENEKLRQILVEELKVPPSKLLGSTSG---------SNY----HSPCLDCFEC 678
ENEKLRQ+LVE+L +PP KL S S S+Y SPC DCF+C
Sbjct: 283 ENEKLRQVLVEDLNIPPCKLQTSNSSRYTSPSEDCSSYSNRQRSPCEDCFDC 334
Score = 31.2 bits (69), Expect(2) = 5e-38
Identities = 13/15 (86%), Positives = 14/15 (93%)
Frame = +2
Query: 2 ATDAFSGVGRHVNSS 46
ATDAFSGVGRHVN +
Sbjct: 63 ATDAFSGVGRHVNDA 77
>ref|XP_002531785.1| conserved hypothetical protein [Ricinus communis]
gi|223528578|gb|EEF30599.1| conserved hypothetical
protein [Ricinus communis]
Length = 305
Score = 148 bits (373), Expect(2) = 3e-35
Identities = 89/195 (45%), Positives = 118/195 (60%), Gaps = 1/195 (0%)
Frame = +1
Query: 97 AIKPGVIHRLQSCFVQAMANLMMKFGV-PGLSIGQGNLPDSFTRGMGMKNMSSMQNPLGN 273
A+KPGV+ ++Q ++ + +M K G+ P LSI QG P S G+ + +QNPLG+
Sbjct: 116 AVKPGVVQKIQFYLMEVITKMMTKVGMSPNLSISQGGFPMSMQSGISTLSGPLIQNPLGS 175
Query: 274 VMPLALNTAELTSQGQPGKLNLDMGSTYKSFASKKTLQDTSFGSRTEKVISGFLQSPLLK 453
+ LA + TSQ G N+ +Y + AS +L DT FGSRTEKV+S FLQ+ +LK
Sbjct: 176 ITQLAPQLPDQTSQSMHGFGNMSPRPSYGNSASISSLGDTPFGSRTEKVLSSFLQNSMLK 235
Query: 454 DEGETDLNEVAGRLRSENNVLQMVLKHQQVIEALTEENEKLRQILVEELKVPPSKLLGST 633
E T+L+EV VLKHQ+VIE L EENEKLRQIL+E+LK+ PSK S
Sbjct: 236 -EDNTNLDEV-------------VLKHQKVIEELMEENEKLRQILMEDLKISPSKFQSSY 281
Query: 634 SGSNYHSPCLDCFEC 678
S + S C DCFEC
Sbjct: 282 S-TRTKSTCADCFEC 295
Score = 27.3 bits (59), Expect(2) = 3e-35
Identities = 11/15 (73%), Positives = 12/15 (80%)
Frame = +2
Query: 2 ATDAFSGVGRHVNSS 46
ATDAFSG RHVN +
Sbjct: 74 ATDAFSGASRHVNDA 88
>ref|XP_004148359.1| PREDICTED: uncharacterized protein LOC101209798 [Cucumis sativus]
gi|449526614|ref|XP_004170308.1| PREDICTED:
uncharacterized LOC101209798 [Cucumis sativus]
Length = 310
Score = 144 bits (364), Expect(2) = 2e-34
Identities = 82/195 (42%), Positives = 118/195 (60%), Gaps = 1/195 (0%)
Frame = +1
Query: 97 AIKPGVIHRLQSCFVQAMANLMMKF-GVPGLSIGQGNLPDSFTRGMGMKNMSSMQNPLGN 273
AIKP +H++QS +QAM +M K P L I QG +P S + N S ++P+ +
Sbjct: 114 AIKPSFLHQVQSSAMQAMEKVMTKLENNPSLPISQGAIPVSLQSASSITNASENEHPIAS 173
Query: 274 VMPLALNTAELTSQGQPGKLNLDMGSTYKSFASKKTLQDTSFGSRTEKVISGFLQSPLLK 453
+ +A + L+ GST ++ S + S+G+RTEKVI FLQ+P+ K
Sbjct: 174 IRKIAKEVPGTAPEDLSAYLDTK-GSTLQNALSSR-----SYGTRTEKVIDSFLQNPVFK 227
Query: 454 DEGETDLNEVAGRLRSENNVLQMVLKHQQVIEALTEENEKLRQILVEELKVPPSKLLGST 633
E +T+L + GRLR EN++ QMV+ HQ++I+ L EEN KLRQILVE+LK+PPSKL ++
Sbjct: 228 GE-DTELKDEVGRLRLENHLFQMVIMHQKLIQELREENNKLRQILVEDLKIPPSKLFQAS 286
Query: 634 SGSNYHSPCLDCFEC 678
+ PC DCFEC
Sbjct: 287 NIGRKIPPCSDCFEC 301
Score = 28.1 bits (61), Expect(2) = 2e-34
Identities = 11/15 (73%), Positives = 14/15 (93%)
Frame = +2
Query: 2 ATDAFSGVGRHVNSS 46
ATDAFSG+ RH+N+S
Sbjct: 72 ATDAFSGITRHLNNS 86