BLASTX nr result

ID: Coptis24_contig00011940 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00011940
         (911 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004135352.1| PREDICTED: uncharacterized protein LOC101220...   199   1e-48
ref|XP_003540643.1| PREDICTED: C2 domain-containing protein At1g...   196   6e-48
ref|XP_002312239.1| integral membrane single C2 domain protein [...   194   3e-47
ref|XP_002271879.1| PREDICTED: uncharacterized protein LOC100247...   193   4e-47
ref|XP_002316143.1| integral membrane single C2 domain protein [...   192   9e-47

>ref|XP_004135352.1| PREDICTED: uncharacterized protein LOC101220807 [Cucumis sativus]
           gi|449503295|ref|XP_004161931.1| PREDICTED:
           uncharacterized LOC101220807 [Cucumis sativus]
          Length = 674

 Score =  199 bits (505), Expect = 1e-48
 Identities = 104/193 (53%), Positives = 124/193 (64%), Gaps = 1/193 (0%)
 Frame = +1

Query: 334 SNRVRLRKRMCVICSSSSSGGNHPNELTFSSGNSLVSQTAKAFVAKXXXXXXXXXXXXXX 513
           S+ +  R+R  ++CS S  G     +L F++      +  + FV                
Sbjct: 40  SSTLTFRRRWFLVCSLSPDGVTSNFDLEFATS---ARRGVRNFVVNRISNELEGEEFSQE 96

Query: 514 XXXXXTSSKFTGFEEDPLVDKLRTQLGVIHPLPSPPINGNIASLXXXXXXXXXXXDKVWT 693
                  S FTGF+EDP+VDKLRTQLG IHP+PSPPIN NI  L           DK+WT
Sbjct: 97  ESSVQVGSNFTGFQEDPIVDKLRTQLGAIHPIPSPPINRNIVGLFVFFFFVGVAFDKLWT 156

Query: 694 SRKRNKS-DSDARPGIWPQVPTSFSLFLEKDLQRKESVEWVNMVLGKLWKVYRVGLENWL 870
            RKR+KS ++D R G WPQVPTSFS FLEKDLQRKESVEWVNMVLGKLWKVYR G+E+WL
Sbjct: 157 FRKRSKSRNNDGRLGTWPQVPTSFSSFLEKDLQRKESVEWVNMVLGKLWKVYRPGIEDWL 216

Query: 871 IGLLQPVIDNLKK 909
           +GLLQPVIDNLKK
Sbjct: 217 VGLLQPVIDNLKK 229


>ref|XP_003540643.1| PREDICTED: C2 domain-containing protein At1g53590-like [Glycine
           max]
          Length = 665

 Score =  196 bits (498), Expect = 6e-48
 Identities = 94/127 (74%), Positives = 105/127 (82%), Gaps = 2/127 (1%)
 Frame = +1

Query: 535 SKFTGFEEDPLVDKLRTQLGVIHPLPSPPINGNIASLXXXXXXXXXXXDKVWTSRKRNKS 714
           S FT F EDP+VDKLRTQLGVIHP+PSPPIN N+  L           DK+WTSR+RNK+
Sbjct: 100 SNFTAFSEDPIVDKLRTQLGVIHPIPSPPINRNVVFLFVFFFFVGVVFDKLWTSRRRNKN 159

Query: 715 DSD--ARPGIWPQVPTSFSLFLEKDLQRKESVEWVNMVLGKLWKVYRVGLENWLIGLLQP 888
           +S+   R G+WPQVPTSFSLFLEKDLQRKESVEWVNMVLGKLWKVYR G+ENW+IGLLQP
Sbjct: 160 NSEDRLRGGVWPQVPTSFSLFLEKDLQRKESVEWVNMVLGKLWKVYRGGIENWIIGLLQP 219

Query: 889 VIDNLKK 909
           VIDNLKK
Sbjct: 220 VIDNLKK 226


>ref|XP_002312239.1| integral membrane single C2 domain protein [Populus trichocarpa]
           gi|222852059|gb|EEE89606.1| integral membrane single C2
           domain protein [Populus trichocarpa]
          Length = 657

 Score =  194 bits (492), Expect = 3e-47
 Identities = 94/126 (74%), Positives = 102/126 (80%), Gaps = 1/126 (0%)
 Frame = +1

Query: 535 SKFTGFEEDPLVDKLRTQLGVIHPLPSPPINGNIASLXXXXXXXXXXXDKVWTSRKRNKS 714
           S FTGF+EDP+V KLRTQLG IHP+PSPPIN NI  L           DKVWTSRKR KS
Sbjct: 106 SNFTGFQEDPIVGKLRTQLGAIHPIPSPPINRNIVGLFVFFFFVGVVSDKVWTSRKREKS 165

Query: 715 DSDA-RPGIWPQVPTSFSLFLEKDLQRKESVEWVNMVLGKLWKVYRVGLENWLIGLLQPV 891
           + +  R G WPQVPTSFSLFLEKDLQRKESVEWVNMVLGKLWKVYR G+ENWL+GLLQPV
Sbjct: 166 NEEGKRAGAWPQVPTSFSLFLEKDLQRKESVEWVNMVLGKLWKVYRGGIENWLVGLLQPV 225

Query: 892 IDNLKK 909
           ID+LKK
Sbjct: 226 IDDLKK 231


>ref|XP_002271879.1| PREDICTED: uncharacterized protein LOC100247873 [Vitis vinifera]
           gi|297738258|emb|CBI27459.3| unnamed protein product
           [Vitis vinifera]
          Length = 667

 Score =  193 bits (491), Expect = 4e-47
 Identities = 95/126 (75%), Positives = 103/126 (81%), Gaps = 1/126 (0%)
 Frame = +1

Query: 535 SKFTGFEEDPLVDKLRTQLGVIHPLPSPPINGNIASLXXXXXXXXXXXDKVWTSRKRNKS 714
           S+FT F+EDP+VDKLRTQLGVIHP+PSPPIN NI  L           DKVWTS K+ KS
Sbjct: 102 SQFTNFQEDPIVDKLRTQLGVIHPIPSPPINRNIVGLFGFFFLIGVVFDKVWTSGKKKKS 161

Query: 715 DSD-ARPGIWPQVPTSFSLFLEKDLQRKESVEWVNMVLGKLWKVYRVGLENWLIGLLQPV 891
           + +  R GIWPQVPTSFSL LEKDLQRKESVEWVNMVLGKLWKVYR G+ENWLIGLLQPV
Sbjct: 162 NIEQGRSGIWPQVPTSFSLLLEKDLQRKESVEWVNMVLGKLWKVYRGGIENWLIGLLQPV 221

Query: 892 IDNLKK 909
           IDNLKK
Sbjct: 222 IDNLKK 227


>ref|XP_002316143.1| integral membrane single C2 domain protein [Populus trichocarpa]
           gi|222865183|gb|EEF02314.1| integral membrane single C2
           domain protein [Populus trichocarpa]
          Length = 669

 Score =  192 bits (488), Expect = 9e-47
 Identities = 109/204 (53%), Positives = 124/204 (60%), Gaps = 1/204 (0%)
 Frame = +1

Query: 301 KRLFLGFHLCTSNRVRLRKRMCVICSSSSSGGNHPNELTFSSGNSLVSQTAKAFVAKXXX 480
           K+L   F      R  L    CVI          PN+    + N  +S+  K FV K   
Sbjct: 44  KKLITNFTQQNLRRRFLTFHACVI----------PNDTRNRNVNIELSKGTKGFVLKRIS 93

Query: 481 XXXXXXXXXXXXXXXXTSSKFTGFEEDPLVDKLRTQLGVIHPLPSPPINGNIASLXXXXX 660
                           + S FTGF+EDP+V KLRTQLGVIHP+PSPPIN NI  L     
Sbjct: 94  NELETEELSQEH----SISNFTGFQEDPIVGKLRTQLGVIHPIPSPPINRNIVGLFVFFF 149

Query: 661 XXXXXXDKVWTSRKRNKSDSDARPG-IWPQVPTSFSLFLEKDLQRKESVEWVNMVLGKLW 837
                 DK W SRK++KS+ + + G  WPQVPTSFSLFLEKDLQRKESVEWVNMVLGKLW
Sbjct: 150 FVGVVFDKAWNSRKKDKSNEEGKRGEAWPQVPTSFSLFLEKDLQRKESVEWVNMVLGKLW 209

Query: 838 KVYRVGLENWLIGLLQPVIDNLKK 909
           KVYR G+ENWLIGLLQPVIDNLKK
Sbjct: 210 KVYRGGIENWLIGLLQPVIDNLKK 233


Top