BLASTX nr result

ID: Coptis24_contig00011939 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00011939
         (1132 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002533472.1| ATRAD3, putative [Ricinus communis] gi|22352...   521   e-145
ref|XP_002305225.1| predicted protein [Populus trichocarpa] gi|2...   516   e-144
ref|XP_002263360.1| PREDICTED: probable methyltransferase PMT8 [...   513   e-143
ref|XP_002302925.1| predicted protein [Populus trichocarpa] gi|2...   502   e-140
ref|XP_003616242.1| hypothetical protein MTR_5g077710 [Medicago ...   500   e-139

>ref|XP_002533472.1| ATRAD3, putative [Ricinus communis] gi|223526665|gb|EEF28904.1|
            ATRAD3, putative [Ricinus communis]
          Length = 400

 Score =  521 bits (1341), Expect = e-145
 Identities = 244/331 (73%), Positives = 280/331 (84%), Gaps = 5/331 (1%)
 Frame = +1

Query: 151  AATTSTILVSDGAADDSSTTTHLASEFLAFTSPQPLPFGYSANFDSDTMHPPVGHPCTLF 330
            AAT  +   +   A  S T+  L SEFLAFTS Q LPFG++ NFDSDT++PPVG  CTLF
Sbjct: 53   AATAISTTATITTAATSQTSLDLPSEFLAFTSGQLLPFGFNTNFDSDTIYPPVGQSCTLF 112

Query: 331  KDDLEQYMSYDVNGSCPEDELLAQKLLLKGCEPLPRRRCRPAASPHYIEPFPLPLSLWSI 510
             ++L +YM+Y VNGSCP+DELLAQKLLLKGCEPLPRRRCRPAA P+Y EP+PLP SLW+ 
Sbjct: 113  PNELNRYMNYKVNGSCPDDELLAQKLLLKGCEPLPRRRCRPAAQPNYDEPYPLPTSLWTT 172

Query: 511  PSDNSVVWTAYSCKNYNCLVNRIRNQKGFDDCKDCFDLNSREKTRWKS----SGGLDFSM 678
            P D+SVVWTAY+CK Y CL+NR R QKGFDDCKDCFDL  REK RW S    +G LDF++
Sbjct: 173  PPDSSVVWTAYTCKGYTCLINRFRTQKGFDDCKDCFDLEGREKARWASKQSNAGSLDFAI 232

Query: 679  DEVLASKRPGTVRIGLDIGGGSGTFAVRMMERNITIVTTSMNFNGPFNNFIASRGVIPLY 858
            DEVLA+K+PGT+RIGLDIGGG  TFAVRM +RNITIVTTSMN NGPFNNFIASRGV+PLY
Sbjct: 233  DEVLATKKPGTIRIGLDIGGGVATFAVRMRDRNITIVTTSMNLNGPFNNFIASRGVVPLY 292

Query: 859  VSISQRLPFFDNTLDIVHSMHVMSNWIPTKILHFLLFDIYRVLRPGGLFWLDHFFCVDKQ 1038
            +SISQRLPFFDNTLDIVHSMHV+SNWIPT  LHFL+FDIYRVLRPGGLFWLDHFFCV ++
Sbjct: 293  ISISQRLPFFDNTLDIVHSMHVLSNWIPTTSLHFLMFDIYRVLRPGGLFWLDHFFCVGEE 352

Query: 1039 LD-VYVPLIEGIGFTKVKWVIGRKLDRGPEM 1128
            L+ VY P+IE IGF K+KWV+GRKLDRGPE+
Sbjct: 353  LEQVYAPVIESIGFNKLKWVVGRKLDRGPEL 383


>ref|XP_002305225.1| predicted protein [Populus trichocarpa] gi|222848189|gb|EEE85736.1|
            predicted protein [Populus trichocarpa]
          Length = 399

 Score =  516 bits (1329), Expect = e-144
 Identities = 240/334 (71%), Positives = 282/334 (84%), Gaps = 5/334 (1%)
 Frame = +1

Query: 142  TPTAATTSTILVSDGAADDSSTTTHLASEFLAFTSPQPLPFGYSANFDSDTMHPPVGHPC 321
            T T  ++S++  SD A ++  T   L SEFLAFTS Q LP+G++ NFDSDT +PPVG  C
Sbjct: 50   TLTQISSSSVADSD-ATENPDTQLDLPSEFLAFTSGQALPYGFNTNFDSDTFYPPVGQAC 108

Query: 322  TLFKDDLEQYMSYDVNGSCPEDELLAQKLLLKGCEPLPRRRCRPAASPHYIEPFPLPLSL 501
            T F D+L ++MSY VNGSCP+DELLAQKLLLKGCEPLPRRRCRPA  P Y++P+PLP SL
Sbjct: 109  TRFPDELSRFMSYKVNGSCPDDELLAQKLLLKGCEPLPRRRCRPATQPDYVDPYPLPTSL 168

Query: 502  WSIPSDNSVVWTAYSCKNYNCLVNRIRNQKGFDDCKDCFDLNSREKTRWKS----SGGLD 669
            W+ P ++SVVWTAY+CK+Y CL+NR++ QKGFDDCKDCFDL  REK RW S     G LD
Sbjct: 169  WTTPPNSSVVWTAYTCKDYTCLINRMKTQKGFDDCKDCFDLQGREKNRWASREVIEGSLD 228

Query: 670  FSMDEVLASKRPGTVRIGLDIGGGSGTFAVRMMERNITIVTTSMNFNGPFNNFIASRGVI 849
            F++DEVLA+K+PGT+RIGLDIGGG  TFA+RM ERNITI+TTSMN NGPFNNFIASRGV+
Sbjct: 229  FTIDEVLATKKPGTIRIGLDIGGGVATFAIRMKERNITIITTSMNLNGPFNNFIASRGVV 288

Query: 850  PLYVSISQRLPFFDNTLDIVHSMHVMSNWIPTKILHFLLFDIYRVLRPGGLFWLDHFFCV 1029
            PLY+SISQRLPFFDNTLDIVHSMHV+SNWIPT +LHFL+FDIYRVLRPGGLFWLDHFFCV
Sbjct: 289  PLYISISQRLPFFDNTLDIVHSMHVLSNWIPTTLLHFLMFDIYRVLRPGGLFWLDHFFCV 348

Query: 1030 DKQ-LDVYVPLIEGIGFTKVKWVIGRKLDRGPEM 1128
            + Q LDVY PLIE IGF K+KWV+G+KLDRG E+
Sbjct: 349  EDQFLDVYKPLIETIGFIKLKWVVGKKLDRGAEL 382


>ref|XP_002263360.1| PREDICTED: probable methyltransferase PMT8 [Vitis vinifera]
            gi|147861796|emb|CAN83179.1| hypothetical protein
            VITISV_013308 [Vitis vinifera]
          Length = 392

 Score =  513 bits (1321), Expect = e-143
 Identities = 241/335 (71%), Positives = 280/335 (83%), Gaps = 8/335 (2%)
 Frame = +1

Query: 148  TAATTSTILVSDGAADD---SSTTTHLASEFLAFTSPQPLPFGYSANFDSDTMHPPVGHP 318
            T +TT    V D  +D+   S TTT L +EF++FTSPQ LPFG++ NFDSD++  PVGHP
Sbjct: 41   TPSTTHVAAVDDPVSDNVINSQTTTDLPTEFISFTSPQLLPFGFTTNFDSDSIIAPVGHP 100

Query: 319  CTLFKDDLEQYMSYDVNGSCPEDELLAQKLLLKGCEPLPRRRCRPAASPHYIEPFPLPLS 498
            CT F +DL +YMSY VNGSCP+DEL AQKLLLKGCEPLPRRRCRP     Y EP+PLP S
Sbjct: 101  CTFFANDLSRYMSYRVNGSCPDDELFAQKLLLKGCEPLPRRRCRPTTPNEYQEPYPLPAS 160

Query: 499  LWSIPSDNSVVWTAYSCKNYNCLVNRIRNQKGFDDCKDCFDLNSREKTRWKSS----GGL 666
            LWS P D+SVVWTAY+CKNY+CL+NR RNQKGFDDCKDCFDL   E+ RW  S      L
Sbjct: 161  LWSTPPDSSVVWTAYTCKNYSCLINRKRNQKGFDDCKDCFDLEGTERYRWIGSKSGHNEL 220

Query: 667  DFSMDEVLASKRPGTVRIGLDIGGGSGTFAVRMMERNITIVTTSMNFNGPFNNFIASRGV 846
            DF++DEVL  K+ GTVRIGLDIGGG+GTFAVRM+ERNITIVTTSMN NGPFN+FIASRGV
Sbjct: 221  DFTIDEVLEMKKRGTVRIGLDIGGGAGTFAVRMLERNITIVTTSMNLNGPFNSFIASRGV 280

Query: 847  IPLYVSISQRLPFFDNTLDIVHSMHVMSNWIPTKILHFLLFDIYRVLRPGGLFWLDHFFC 1026
            +PLY+SISQRLPFFDNTLDIVHSMHV+SNWIP  +LHFLLFDIYRVLRPGGLFWLDHFFC
Sbjct: 281  VPLYISISQRLPFFDNTLDIVHSMHVLSNWIPNTLLHFLLFDIYRVLRPGGLFWLDHFFC 340

Query: 1027 VDKQL-DVYVPLIEGIGFTKVKWVIGRKLDRGPEM 1128
            +D+Q+ +VY PLIE +GF K+KWV+G+KLDRGP++
Sbjct: 341  MDEQMEEVYKPLIESVGFKKLKWVVGKKLDRGPKL 375


>ref|XP_002302925.1| predicted protein [Populus trichocarpa] gi|222844651|gb|EEE82198.1|
            predicted protein [Populus trichocarpa]
          Length = 322

 Score =  502 bits (1292), Expect = e-140
 Identities = 232/309 (75%), Positives = 267/309 (86%), Gaps = 5/309 (1%)
 Frame = +1

Query: 217  LASEFLAFTSPQPLPFGYSANFDSDTMHPPVGHPCTLFKDDLEQYMSYDVNGSCPEDELL 396
            L SEFLAF+S Q LP G++ NFDSDT +PPVG  CT F D+L ++MSY VNGSCP+DEL 
Sbjct: 1    LPSEFLAFSSGQVLPLGFNTNFDSDTFYPPVGQACTRFPDELSRFMSYKVNGSCPDDELF 60

Query: 397  AQKLLLKGCEPLPRRRCRPAASPHYIEPFPLPLSLWSIPSDNSVVWTAYSCKNYNCLVNR 576
            AQKLLLKGCEPLPRRRCRPAA P Y+EP+PLP SLW+ P ++SVVWTAY+CK Y CL+NR
Sbjct: 61   AQKLLLKGCEPLPRRRCRPAAQPDYVEPYPLPTSLWTTPPNSSVVWTAYTCKVYTCLINR 120

Query: 577  IRNQKGFDDCKDCFDLNSREKTRWKS----SGGLDFSMDEVLASKRPGTVRIGLDIGGGS 744
             + QKGFDDCKDCFDL+ RE+ RW S     G LDF++DEVLA+K+PGT+RIGLDIGGG 
Sbjct: 121  GKTQKGFDDCKDCFDLHGREQNRWASRQTIEGSLDFTIDEVLATKKPGTIRIGLDIGGGV 180

Query: 745  GTFAVRMMERNITIVTTSMNFNGPFNNFIASRGVIPLYVSISQRLPFFDNTLDIVHSMHV 924
             TFAVRM ERNITI+TTSMN NGPFNNFIASRGV+PLY+SISQRLPFFDNTLDIVHSMHV
Sbjct: 181  ATFAVRMRERNITIITTSMNLNGPFNNFIASRGVMPLYISISQRLPFFDNTLDIVHSMHV 240

Query: 925  MSNWIPTKILHFLLFDIYRVLRPGGLFWLDHFFCVDKQ-LDVYVPLIEGIGFTKVKWVIG 1101
            +SNWIP+ +LHFL+FDIYRVLRPGGLFWLDHFFCV+ Q LDVY PLIE IGF K+KWV+G
Sbjct: 241  LSNWIPSTLLHFLMFDIYRVLRPGGLFWLDHFFCVEDQFLDVYKPLIESIGFIKLKWVVG 300

Query: 1102 RKLDRGPEM 1128
            +KLDRG E+
Sbjct: 301  KKLDRGAEL 309


>ref|XP_003616242.1| hypothetical protein MTR_5g077710 [Medicago truncatula]
            gi|355517577|gb|AES99200.1| hypothetical protein
            MTR_5g077710 [Medicago truncatula]
          Length = 388

 Score =  500 bits (1288), Expect = e-139
 Identities = 231/333 (69%), Positives = 278/333 (83%), Gaps = 3/333 (0%)
 Frame = +1

Query: 136  NYTPTAATTSTILVSDGAADDSSTTTHLASEFLAFTSPQPLPFGYSANFDSDTMHPPVGH 315
            N+T TA  T+T      AA+DS+   +L  EF A TSPQ LP G++ NF+SDT+HPP G 
Sbjct: 44   NFTTTATATAT------AAEDSAGDGYLPPEFFASTSPQKLPLGFNRNFNSDTVHPPAGS 97

Query: 316  PCTLFKDDLEQYMSYDVNGSCPEDELLAQKLLLKGCEPLPRRRCRPAASPHYIEPFPLPL 495
             CTLF DD+  +MSYDVNGSCP+DE+L+Q+LLLKGCEPLPRRRCRPAA P++ +P P P 
Sbjct: 98   ACTLFPDDIRSFMSYDVNGSCPDDEILSQRLLLKGCEPLPRRRCRPAAPPNFPQPIPFPS 157

Query: 496  SLWSIPSDNSVVWTAYSCKNYNCLVNRIRNQKGFDDCKDCFDLNSREKTRWKS--SGGLD 669
            SLWS PS++SVVWTAY+CK+Y CL++R R Q+GFDDCKDCFDLN REK RW +  S GLD
Sbjct: 158  SLWSTPSNSSVVWTAYTCKSYTCLIDRSRTQRGFDDCKDCFDLNGREKHRWTNPRSNGLD 217

Query: 670  FSMDEVLASKRPGTVRIGLDIGGGSGTFAVRMMERNITIVTTSMNFNGPFNNFIASRGVI 849
            FS+D+VL +++PG+VRIGLDIGGG  TFAVRM +RNITI+TTS+N NGPFN+FIASRGV+
Sbjct: 218  FSIDDVLETRKPGSVRIGLDIGGGVATFAVRMKDRNITIITTSLNLNGPFNSFIASRGVL 277

Query: 850  PLYVSISQRLPFFDNTLDIVHSMHVMSNWIPTKILHFLLFDIYRVLRPGGLFWLDHFFCV 1029
            PLY+SISQR PFFDNTLDIVHSMHV+SNWIP  +LHFLLFD+YRVLRPGGLFWLDHFFCV
Sbjct: 278  PLYMSISQRFPFFDNTLDIVHSMHVLSNWIPETLLHFLLFDVYRVLRPGGLFWLDHFFCV 337

Query: 1030 DKQLD-VYVPLIEGIGFTKVKWVIGRKLDRGPE 1125
              QL+ VY P+IE +GF KVKWV G+KLD+GP+
Sbjct: 338  GDQLENVYGPMIESVGFKKVKWVTGKKLDKGPQ 370


Top