BLASTX nr result

ID: Coptis24_contig00011938 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00011938
         (1084 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282690.2| PREDICTED: E3 SUMO-protein ligase MMS21-like...   314   2e-83
emb|CBI20251.3| unnamed protein product [Vitis vinifera]              285   2e-74
ref|XP_004146042.1| PREDICTED: E3 SUMO-protein ligase MMS21-like...   269   8e-70
ref|XP_002317010.1| predicted protein [Populus trichocarpa] gi|2...   268   2e-69
dbj|BAB02569.1| unnamed protein product [Arabidopsis thaliana]        262   9e-68

>ref|XP_002282690.2| PREDICTED: E3 SUMO-protein ligase MMS21-like [Vitis vinifera]
          Length = 261

 Score =  314 bits (805), Expect = 2e-83
 Identities = 160/252 (63%), Positives = 191/252 (75%), Gaps = 9/252 (3%)
 Frame = -3

Query: 1034 MATTSAT---------RIRNAATTLYDDNQSLITEIRKFMSTMKGIAVDLEKENQHEMVK 882
            MA+TSA          R+RNAA+TLY DNQSLI E RK M  MK +AVDLE++ Q +MVK
Sbjct: 1    MASTSAAASRDNGVPGRLRNAASTLYSDNQSLIAEFRKAMILMKEVAVDLERDGQSQMVK 60

Query: 881  ELENGVVELLGVSDECTYLSSAIDSVKNNYQPTDEATDFEKLFEEEIAKIKAGSNSVTPQ 702
            ELE+ VVELLG S++CT  S+AI SV N +QP  E TDF+KLFE+E+AK+KA S+S  PQ
Sbjct: 61   ELEDAVVELLGTSEDCTQFSAAIQSVGNEHQPRPELTDFKKLFEDEVAKLKA-SSSFAPQ 119

Query: 701  KRPFLRQFKEAIWNVHHAGQLMPGDEQEDIVMTSTESTLLNVTCPLSGKPVINLQDPVRS 522
              P LRQF+EA+WNVHHAGQ MPGDEQEDIVMTST+  LLN+TCPLSG+PV  L DPVRS
Sbjct: 120  SHPLLRQFREAVWNVHHAGQPMPGDEQEDIVMTSTQCNLLNITCPLSGRPVTELADPVRS 179

Query: 521  LDCKHIYAKKEVMHFIKTKKPIPLCPVAGCPKILQAGKVVCDPLLLIEIDEARTTSNQNT 342
            +DCKHIY KK ++H+IK+K     CPVA CPKILQA +VVCD LL IEIDE ++ S Q  
Sbjct: 180  VDCKHIYEKKAILHYIKSKHGRAQCPVAACPKILQAERVVCDALLQIEIDEMKSMSKQPG 239

Query: 341  QPAVIEDITEQD 306
            +  VIED TE D
Sbjct: 240  RTDVIEDFTELD 251


>emb|CBI20251.3| unnamed protein product [Vitis vinifera]
          Length = 449

 Score =  285 bits (728), Expect = 2e-74
 Identities = 143/224 (63%), Positives = 173/224 (77%)
 Frame = -3

Query: 977 NQSLITEIRKFMSTMKGIAVDLEKENQHEMVKELENGVVELLGVSDECTYLSSAIDSVKN 798
           N SL+ + RK M  MK +AVDLE++ Q +MVKELE+ VVELLG S++CT  S+AI SV N
Sbjct: 218 NLSLL-KFRKAMILMKEVAVDLERDGQSQMVKELEDAVVELLGTSEDCTQFSAAIQSVGN 276

Query: 797 NYQPTDEATDFEKLFEEEIAKIKAGSNSVTPQKRPFLRQFKEAIWNVHHAGQLMPGDEQE 618
            +QP  E TDF+KLFE+E+AK+KA S+S  PQ  P LRQF+EA+WNVHHAGQ MPGDEQE
Sbjct: 277 EHQPRPELTDFKKLFEDEVAKLKA-SSSFAPQSHPLLRQFREAVWNVHHAGQPMPGDEQE 335

Query: 617 DIVMTSTESTLLNVTCPLSGKPVINLQDPVRSLDCKHIYAKKEVMHFIKTKKPIPLCPVA 438
           DIVMTST+  LLN+TCPLSG+PV  L DPVRS+DCKHIY KK ++H+IK+K     CPVA
Sbjct: 336 DIVMTSTQCNLLNITCPLSGRPVTELADPVRSVDCKHIYEKKAILHYIKSKHGRAQCPVA 395

Query: 437 GCPKILQAGKVVCDPLLLIEIDEARTTSNQNTQPAVIEDITEQD 306
            CPKILQA +VVCD LL IEIDE ++ S Q  +  VIED TE D
Sbjct: 396 ACPKILQAERVVCDALLQIEIDEMKSMSKQPGRTDVIEDFTELD 439


>ref|XP_004146042.1| PREDICTED: E3 SUMO-protein ligase MMS21-like [Cucumis sativus]
            gi|449510330|ref|XP_004163634.1| PREDICTED: E3
            SUMO-protein ligase MMS21-like [Cucumis sativus]
          Length = 248

 Score =  269 bits (688), Expect = 8e-70
 Identities = 135/236 (57%), Positives = 169/236 (71%)
 Frame = -3

Query: 1013 RIRNAATTLYDDNQSLITEIRKFMSTMKGIAVDLEKENQHEMVKELENGVVELLGVSDEC 834
            RI++AAT ++ DNQSL+ E+RK +  MK I VDLEKE Q++MVKELE  +VELL   + C
Sbjct: 15   RIKSAATIMHSDNQSLLAELRKTLIMMKEIGVDLEKEKQYKMVKELEKSIVELLSAYENC 74

Query: 833  TYLSSAIDSVKNNYQPTDEATDFEKLFEEEIAKIKAGSNSVTPQKRPFLRQFKEAIWNVH 654
               SSAI SV N Y+P +E TDFEKL ++E+AK+   S+S      P +RQF+EAIWNVH
Sbjct: 75   NNFSSAIQSVGNTYEPKEELTDFEKLLDDEVAKVSESSSS-NFANHPIIRQFREAIWNVH 133

Query: 653  HAGQLMPGDEQEDIVMTSTESTLLNVTCPLSGKPVINLQDPVRSLDCKHIYAKKEVMHFI 474
            HAGQ M G+EQED+VMTST+  LLNVTCPLSGKPV  L +PVRS++CKHIY K  +M ++
Sbjct: 134  HAGQAMAGEEQEDVVMTSTQCNLLNVTCPLSGKPVTELAEPVRSVECKHIYEKAAIMQYL 193

Query: 473  KTKKPIPLCPVAGCPKILQAGKVVCDPLLLIEIDEARTTSNQNTQPAVIEDITEQD 306
             +KK    CPVA CPK+LQ  KVV DP L IEIDE R  S  + +   I+D TE D
Sbjct: 194  NSKKSRAQCPVAACPKMLQPDKVVLDPFLEIEIDELRKMSRHSGR---IQDFTELD 246


>ref|XP_002317010.1| predicted protein [Populus trichocarpa] gi|222860075|gb|EEE97622.1|
            predicted protein [Populus trichocarpa]
          Length = 257

 Score =  268 bits (684), Expect = 2e-69
 Identities = 136/254 (53%), Positives = 173/254 (68%), Gaps = 11/254 (4%)
 Frame = -3

Query: 1034 MATTSATR-----------IRNAATTLYDDNQSLITEIRKFMSTMKGIAVDLEKENQHEM 888
            MA+TSA R           +  +A+ L  +NQSLI E+RK  + MK IAVDLE+EN+   
Sbjct: 1    MASTSAPRGGGDVPSASGIMTTSASMLCSENQSLIVEMRKVFNMMKEIAVDLERENESAK 60

Query: 887  VKELENGVVELLGVSDECTYLSSAIDSVKNNYQPTDEATDFEKLFEEEIAKIKAGSNSVT 708
            V ELEN V ELL   ++CTY +SAI+SV N YQP  E TDF+KL  +E  K K G+ S  
Sbjct: 61   VNELENTVAELLATYEDCTYQTSAIESVGNTYQPGAELTDFKKLLNDEFMKFK-GNKSSA 119

Query: 707  PQKRPFLRQFKEAIWNVHHAGQLMPGDEQEDIVMTSTESTLLNVTCPLSGKPVINLQDPV 528
            PQ  P LRQF+EA+WNVHH+GQ MPG+E EDIVMTST+ST+LN+TCPLSGKP+  L +PV
Sbjct: 120  PQNHPLLRQFREAVWNVHHSGQPMPGEEHEDIVMTSTQSTILNITCPLSGKPITELAEPV 179

Query: 527  RSLDCKHIYAKKEVMHFIKTKKPIPLCPVAGCPKILQAGKVVCDPLLLIEIDEARTTSNQ 348
            R +DCKH+Y KK +M +I        CPV GCP+ L+  KVV DPLLL+EI+E R+ S +
Sbjct: 180  RGVDCKHVYEKKAIMGYISLNAQAK-CPVTGCPRYLRQDKVVSDPLLLVEIEEMRSMSKE 238

Query: 347  NTQPAVIEDITEQD 306
            N    ++ED T  D
Sbjct: 239  NMTATLVEDFTMTD 252


>dbj|BAB02569.1| unnamed protein product [Arabidopsis thaliana]
          Length = 336

 Score =  262 bits (670), Expect = 9e-68
 Identities = 129/236 (54%), Positives = 168/236 (71%)
 Frame = -3

Query: 1019 ATRIRNAATTLYDDNQSLITEIRKFMSTMKGIAVDLEKENQHEMVKELENGVVELLGVSD 840
            A RI+NA+  L  DN S + +IRK ++ MK IAV LEKENQ + VK+LEN V ELL +  
Sbjct: 98   AGRIQNASLVLVSDNSSTLADIRKAVAMMKNIAVQLEKENQTDKVKDLENSVAELLDLHS 157

Query: 839  ECTYLSSAIDSVKNNYQPTDEATDFEKLFEEEIAKIKAGSNSVTPQKRPFLRQFKEAIWN 660
            +C + S+AI SV N YQP ++ TDF+KL ++E  K+KA  +SV PQ    +RQF+EA+WN
Sbjct: 158  DCNHRSTAIQSVANRYQPVEQLTDFKKLLDDEFTKLKATPSSV-PQNDHLMRQFREAVWN 216

Query: 659  VHHAGQLMPGDEQEDIVMTSTESTLLNVTCPLSGKPVINLQDPVRSLDCKHIYAKKEVMH 480
            VHHAG+ MPGD+ EDIVMTST+  LLN+TCPLSGKPV  L DPVRS+DC+H+Y K  ++H
Sbjct: 217  VHHAGEPMPGDDDEDIVMTSTQCPLLNMTCPLSGKPVTELADPVRSMDCRHVYEKSVILH 276

Query: 479  FIKTKKPIPLCPVAGCPKILQAGKVVCDPLLLIEIDEARTTSNQNTQPAVIEDITE 312
            +I    P   CPVAGC   LQ  KV+CD +L  EI+E R+ + Q+ +  VIED TE
Sbjct: 277  YI-VNNPNANCPVAGCRGKLQNSKVICDAMLKFEIEEMRSLNKQSNRAEVIEDFTE 331


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