BLASTX nr result
ID: Coptis24_contig00011937
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00011937
(2439 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002263998.1| PREDICTED: 2-succinylbenzoate--CoA ligase, c... 656 0.0
ref|XP_002330602.1| predicted protein [Populus trichocarpa] gi|2... 648 0.0
ref|XP_003633043.1| PREDICTED: 2-succinylbenzoate--CoA ligase, c... 612 e-172
ref|XP_003546260.1| PREDICTED: 2-succinylbenzoate--CoA ligase, c... 609 e-172
ref|XP_003594530.1| 2-succinylbenzoate-CoA ligase [Medicago trun... 607 e-171
>ref|XP_002263998.1| PREDICTED: 2-succinylbenzoate--CoA ligase, chloroplastic/peroxisomal
isoform 1 [Vitis vinifera] gi|297740839|emb|CBI31021.3|
unnamed protein product [Vitis vinifera]
Length = 565
Score = 656 bits (1693), Expect = 0.0
Identities = 331/567 (58%), Positives = 414/567 (73%), Gaps = 7/567 (1%)
Frame = +1
Query: 217 QGHICQCLRRISRIRLDSPFTIFGNRTKTGLQFVEGVQSLALGLSNLGLKPGHVVAIAAL 396
+ HIC CL R++ +R+ S TI GNR TG QFV+GV SLA GL +LG++ G VVAI+AL
Sbjct: 6 RAHICHCLSRLATLRIHSAVTISGNRRNTGHQFVDGVLSLAQGLLDLGIRSGDVVAISAL 65
Query: 397 NSDIYLEWMLAVAYIGAIISPLNYRWSLEEARSALEILEPEMLVVDDSCAIWYFELQTYN 576
NSD YLE LAVA++G +++PLNYRWS EEAR A+E+++P ML+ D SC+ WY +L+ +
Sbjct: 66 NSDRYLECFLAVAFVGGVVAPLNYRWSFEEARFAMEMVKPVMLITDSSCSYWYPKLENDH 125
Query: 577 --SLRWHV---CLGDPLPFVNHSDNGGLDQVLTTGTLKSVLQTSASLDYQWAPEGIVLIC 741
SLRWHV L D + V L LTT LK S S +Y WAPEG VLIC
Sbjct: 126 LPSLRWHVFMDSLSDVVSIV-------LFSALTTEMLKKPALKSLSFNYAWAPEGAVLIC 178
Query: 742 FTSGTSGRPKGVAIGHTALIVQSLAKIAVAGYSEEDVYLHTAPLCHIGGISSGLAMLMVG 921
FTSGT+GRPKGV I H+ALI+QSLAKIA+ GY E+DVYLHTAPLCHIGG+SS L MLMVG
Sbjct: 179 FTSGTTGRPKGVTISHSALIIQSLAKIAIVGYDEDDVYLHTAPLCHIGGLSSALTMLMVG 238
Query: 922 ACHVLLPKFVSGSVLQAIEQYHVSSLITVPAMMADLISYIRSRATWKNGESLKKILNGGG 1101
CH+ +PKF + L+AI+Q+HV+SLITVPA+M DL+S IR + TWK ES+KKILNGGG
Sbjct: 239 GCHIFIPKFDAKLALEAIKQHHVTSLITVPAIMVDLVSIIRMKMTWKVTESVKKILNGGG 298
Query: 1102 QLSPKLIRDAAEVFPNAMLISAYGMTETCSSLTFMTLNQIQCIGFKGHPQKISEVK-PDW 1278
LS LI DA + FP A ++SAYGMTETCSSLTFMTL C + Q+ E+K +
Sbjct: 299 GLSNGLIEDAIKFFPRAKILSAYGMTETCSSLTFMTLYDPTCASSRQALQEFVEIKSSSF 358
Query: 1279 DNQLGVCVGKPAPHVELFVNGNGHCSIGRILTRGPHVMLKYWNQVPLKKLDSLHQGWLDT 1458
GVCVGKPAPHVEL + + +GRILTRGPH+ML+YW+Q+ + DS +GWLDT
Sbjct: 359 HLPEGVCVGKPAPHVELKICFDSSDHVGRILTRGPHIMLRYWDQISSRPSDSPDEGWLDT 418
Query: 1459 GDIGWLDDKGAVWLIGRSNDRIKSGGENVYPEEVEAVLSQHPGVYSIAVVGVPDARLSEM 1638
GDIG +DD G +WLIGR+N+RIKSGGENVYPEEVE VLSQHPGV VVG+PD RL+EM
Sbjct: 419 GDIGSIDDYGNIWLIGRTNNRIKSGGENVYPEEVETVLSQHPGVTGSVVVGLPDVRLTEM 478
Query: 1639 VVACVQLQEGWKWVGHDSQSP-ERMDLQLTTNILYKYCKENKMTRFKIPKIFIPWRGPFP 1815
VVAC+++++ W+W + P E+ +L L++ L +C+E +T FKIPK+F WR PFP
Sbjct: 479 VVACIRIKDNWQWADNSPVHPTEKKELVLSSETLRHHCREKNLTGFKIPKLFTLWRKPFP 538
Query: 1816 LTSTGKLKRDEVRREATSRLHLFPSNL 1896
LTSTGKL+R +V+RE S LH PSNL
Sbjct: 539 LTSTGKLRRYQVQREVLSHLHSLPSNL 565
>ref|XP_002330602.1| predicted protein [Populus trichocarpa] gi|222872160|gb|EEF09291.1|
predicted protein [Populus trichocarpa]
Length = 590
Score = 648 bits (1671), Expect = 0.0
Identities = 331/596 (55%), Positives = 417/596 (69%), Gaps = 31/596 (5%)
Frame = +1
Query: 202 MEEQRQGHICQCLRRISRIRLDSPFTIFGNRTKTGLQFVEGVQSLALGLSNLGLKPGHVV 381
M Q HICQCL R+S +R S TI GNR KTG QFV V SLA GL LGL G +V
Sbjct: 1 MANYSQAHICQCLTRLSTLRSTSVVTISGNRQKTGHQFVGDVLSLAHGLLQLGLGNGDIV 60
Query: 382 AIAALNSDIYLEWMLAVAYIGAIISPLNYRWSLEEARSALEILEPEMLVVDDSCAIWYFE 561
AI NSD YLEW+LAVA++G I++PLNYRWS EEA+SA+ ++ P ML+ D+SC WY E
Sbjct: 61 AICGFNSDWYLEWLLAVAFVGGIVAPLNYRWSFEEAKSAMLMVRPVMLITDESCKHWYQE 120
Query: 562 LQT--YNSLRWHVCLGDPLP-FVNHSDNGGLDQVLTTGTLKSVLQTSASLDYQWAPEGIV 732
LQ+ S++WHV G P FV S+ VLTT TL+ + + LDY WAPEG V
Sbjct: 121 LQSNALPSVKWHVFSGSPSSGFVKTSN------VLTTETLRKHVIGTKQLDYSWAPEGAV 174
Query: 733 LICFTSGTSGRPKGVAIGHTALIVQSLAKIAVAGYSEED--------------------- 849
+ICFTSGT+GRPKGV + H+A+IVQSLAK+A GYSE+D
Sbjct: 175 IICFTSGTTGRPKGVIVSHSAMIVQSLAKVAAVGYSEDDFLIIWRIVALVARNDCWLDSL 234
Query: 850 ------VYLHTAPLCHIGGISSGLAMLMVGACHVLLPKFVSGSVLQAIEQYHVSSLITVP 1011
VYLHTAPLCHIGG+SS + MLMVG CHVL+PKF + ++AI+Q+ V+SLITVP
Sbjct: 235 FLGLLQVYLHTAPLCHIGGLSSAITMLMVGGCHVLIPKFEASLAIEAIKQHCVTSLITVP 294
Query: 1012 AMMADLISYIRSRATWKNGESLKKILNGGGQLSPKLIRDAAEVFPNAMLISAYGMTETCS 1191
AMMADLIS R + TWK + +KK+LNGGG LS +L++DA E+FP A L+SAYGMTETCS
Sbjct: 295 AMMADLISLTRLKETWKGRQYVKKLLNGGGSLSAELMKDATELFPRAKLLSAYGMTETCS 354
Query: 1192 SLTFMTLNQIQCIGFKGHPQKISEVKPDWDNQL-GVCVGKPAPHVELFVNGNGHCSIGRI 1368
SLTFMTL+ Q + + K +Q GVCVGKP PHVEL ++ + +IGRI
Sbjct: 355 SLTFMTLHDPTLQTPAQTLQTVDKTKSSSAHQPHGVCVGKPPPHVELKISADEPSTIGRI 414
Query: 1369 LTRGPHVMLKYWNQVPLKKLDSLHQGWLDTGDIGWLDDKGAVWLIGRSNDRIKSGGENVY 1548
LTRGPH+ML+YW+Q P+K +S + WLDTGDIG +DD G VWL+GR N +IKSGGEN+Y
Sbjct: 415 LTRGPHLMLRYWDQNPMKATESTNDFWLDTGDIGSIDDCGNVWLVGRQNAQIKSGGENIY 474
Query: 1549 PEEVEAVLSQHPGVYSIAVVGVPDARLSEMVVACVQLQEGWKWVGHDSQSPERMDLQLTT 1728
PEEVEA+L QHPGV + VVGVP+ARL+EMVVAC++L++ W+W ++ + +L L
Sbjct: 475 PEEVEAMLLQHPGVIATVVVGVPEARLTEMVVACIKLRQSWQWTNNNCKQSAENNLTLCR 534
Query: 1729 NILYKYCKENKMTRFKIPKIFIPWRGPFPLTSTGKLKRDEVRREATSRLHLFPSNL 1896
+L YC+E K+T FK+PK+FI WR PFPLT+TGK++RD+VRRE S L FPSNL
Sbjct: 535 EVLRDYCREKKLTGFKVPKLFILWRKPFPLTTTGKIRRDQVRREVMSHLQFFPSNL 590
>ref|XP_003633043.1| PREDICTED: 2-succinylbenzoate--CoA ligase, chloroplastic/peroxisomal
isoform 2 [Vitis vinifera]
Length = 545
Score = 612 bits (1578), Expect = e-172
Identities = 313/572 (54%), Positives = 397/572 (69%), Gaps = 12/572 (2%)
Frame = +1
Query: 217 QGHICQCLRRISRIRLDSPFTIFGNRTKTGLQFVEGVQSLALGLSNLGLKPGHVVAIAAL 396
+ HIC CL R++ +R+ S TI GNR TG QFV+GV SLA GL +LG++ G VVAI+AL
Sbjct: 6 RAHICHCLSRLATLRIHSAVTISGNRRNTGHQFVDGVLSLAQGLLDLGIRSGDVVAISAL 65
Query: 397 NSDIYLEWMLAVAYIGAIISPLNYRWSLEEARSALEILEPEMLVVDDSCAIWYFELQTYN 576
NSD YLE LAVA++G +++PLNYRWS EEAR A+E+++P ML+ D SC+ WY +L+ +
Sbjct: 66 NSDRYLECFLAVAFVGGVVAPLNYRWSFEEARFAMEMVKPVMLITDSSCSYWYPKLENDH 125
Query: 577 --SLRWHVCLGDPLPFVNHSDNGGLDQVLTTGTLKSVLQTSASLDYQWAPEGIVLICFTS 750
SLRWHV F++ + LTT LK S S +Y WAPEG VLICFTS
Sbjct: 126 LPSLRWHV-------FMDSLSEFSSKETLTTEMLKKPALKSLSFNYAWAPEGAVLICFTS 178
Query: 751 GTSGRPKGVAIGHTALIVQSLAKIAVAGYSEEDVYLHTAPLCHIGGISSGLAMLMVGACH 930
GT+GRPKGV I H+ALI+QSLAKIA+ GY E+DVYLHTAPLCHIGG+SS L MLMVG CH
Sbjct: 179 GTTGRPKGVTISHSALIIQSLAKIAIVGYDEDDVYLHTAPLCHIGGLSSALTMLMVGGCH 238
Query: 931 VLLPKFVSGSVLQAIEQYHVSSLITVPAMMADLIS--------YIRSRATWKNGESLKKI 1086
+ +PKF + L+AI+Q+HV+SLITVPA+M DL+S ++R + TWK ES+KKI
Sbjct: 239 IFIPKFDAKLALEAIKQHHVTSLITVPAIMVDLVSIISSGLESFVRMKMTWKVTESVKKI 298
Query: 1087 LNGGGQLSPKLIRDAAEVFPNAMLISAYGMTETCSSLTFMTLNQIQCIGFKGHPQKISEV 1266
LNGG MTETCSSLTFMTL C + Q+ E+
Sbjct: 299 LNGG-------------------------MTETCSSLTFMTLYDPTCASSRQALQEFVEI 333
Query: 1267 KPD-WDNQLGVCVGKPAPHVELFVNGNGHCSIGRILTRGPHVMLKYWNQVPLKKLDSLHQ 1443
K + GVCVGKPAPHVEL + + +GRILTRGPH+ML+YW+Q+ + DS +
Sbjct: 334 KSSSFHLPEGVCVGKPAPHVELKICFDSSDHVGRILTRGPHIMLRYWDQISSRPSDSPDE 393
Query: 1444 GWLDTGDIGWLDDKGAVWLIGRSNDRIKSGGENVYPEEVEAVLSQHPGVYSIAVVGVPDA 1623
GWLDTGDIG +DD G +WLIGR+N+RIKSGGENVYPEEVE VLSQHPGV VVG+PD
Sbjct: 394 GWLDTGDIGSIDDYGNIWLIGRTNNRIKSGGENVYPEEVETVLSQHPGVTGSVVVGLPDV 453
Query: 1624 RLSEMVVACVQLQEGWKWVGHDSQSP-ERMDLQLTTNILYKYCKENKMTRFKIPKIFIPW 1800
RL+EMVVAC+++++ W+W + P E+ +L L++ L +C+E +T FKIPK+F W
Sbjct: 454 RLTEMVVACIRIKDNWQWADNSPVHPTEKKELVLSSETLRHHCREKNLTGFKIPKLFTLW 513
Query: 1801 RGPFPLTSTGKLKRDEVRREATSRLHLFPSNL 1896
R PFPLTSTGKL+R +V+RE S LH PSNL
Sbjct: 514 RKPFPLTSTGKLRRYQVQREVLSHLHSLPSNL 545
>ref|XP_003546260.1| PREDICTED: 2-succinylbenzoate--CoA ligase,
chloroplastic/peroxisomal-like isoform 1 [Glycine max]
Length = 560
Score = 609 bits (1571), Expect = e-172
Identities = 312/569 (54%), Positives = 394/569 (69%), Gaps = 11/569 (1%)
Frame = +1
Query: 223 HICQCLRRISRIRLDSPFTIFGNRTKTGLQFVEGVQSLALGLSNLGLKPGHVVAIAALNS 402
HICQCL + +R P I GNR KTG + VE V SLA GL +LGL G VVAI+A NS
Sbjct: 8 HICQCLSHLLTLRQHFPVIIAGNRRKTGQELVEEVLSLAQGLLHLGLTSGQVVAISAFNS 67
Query: 403 DIYLEWMLAVAYIGAIISPLNYRWSLEEARSALEILEPEMLVVDDSCAIWYFELQTYN-- 576
D YLEW+LA+A++G I +PLNYRWS EEAR A+ ++P +LV+D+S WY +LQ +
Sbjct: 68 DRYLEWLLAIAFVGGIAAPLNYRWSFEEARLAMAAVKPVLLVIDESSYTWYSKLQQNDVP 127
Query: 577 SLRWHVCLGDPLPFVNHSDNGGLDQVLTTGTLKSVLQTSASLDYQWAPEGIVLICFTSGT 756
SL+WH+ L P S + VLT LK DY WAP+G V+ICFTSGT
Sbjct: 128 SLKWHILLDSP------SSDFSKWNVLTPEMLKRHPIKLLPFDYSWAPDGAVIICFTSGT 181
Query: 757 SGRPKGVAIGHTALIVQSLAKIAVAGYSEEDVYLHTAPLCHIGGISSGLAMLMVGACHVL 936
+G+PKGV + H AL +QSLAKIA+ GY+ +DVYLHTAPLCHIGG+SS + MLMVG CHVL
Sbjct: 182 TGKPKGVTLSHGALTIQSLAKIAIVGYNVDDVYLHTAPLCHIGGLSSAMTMLMVGGCHVL 241
Query: 937 LPKFVSGSVLQAIEQYHVSSLITVPAMMADLISYIRSRATWKNGESLKKILNGGGQLSPK 1116
+PKF + S + AIEQ+ V+S ITVPA+MA LIS IR + TWK GE++KKILNGGG LS +
Sbjct: 242 MPKFDAESAVDAIEQHAVTSFITVPAIMASLISIIRHKETWKGGETVKKILNGGGSLSHE 301
Query: 1117 LIRDAAEVFPNAMLISAYGMTETCSSLTFMTL---------NQIQCIGFKGHPQKISEVK 1269
LI+D + F A LISAYGMTETCSSLTF+TL +Q G G K+
Sbjct: 302 LIKDTSIFFHKAKLISAYGMTETCSSLTFLTLYDPMHETTNQSLQAFGVAG--SKLIH-- 357
Query: 1270 PDWDNQLGVCVGKPAPHVELFVNGNGHCSIGRILTRGPHVMLKYWNQVPLKKLDSLHQGW 1449
Q GVC+GK APH+EL ++ + GRILTRGPH+ML+YW+Q L+ + W
Sbjct: 358 ----QQQGVCIGKAAPHIELKISADASGHTGRILTRGPHIMLRYWDQTLTNPLNPNKRAW 413
Query: 1450 LDTGDIGWLDDKGAVWLIGRSNDRIKSGGENVYPEEVEAVLSQHPGVYSIAVVGVPDARL 1629
LDTGDIG +D G +WL+GR+N RIKSGGEN+YPEEVEA+L QHPG+ S+ VVG+PDA L
Sbjct: 414 LDTGDIGSIDHYGNLWLLGRTNGRIKSGGENIYPEEVEAILQQHPGIASVVVVGIPDAHL 473
Query: 1630 SEMVVACVQLQEGWKWVGHDSQSPERMDLQLTTNILYKYCKENKMTRFKIPKIFIPWRGP 1809
+EMV AC+QL+E W+W S S E + L+ + +YC EN ++RFKIPK+FI WR P
Sbjct: 474 TEMVAACIQLRENWQWSEQLSASNE--EFLLSRKNIQQYCIENHLSRFKIPKMFIVWRKP 531
Query: 1810 FPLTSTGKLKRDEVRREATSRLHLFPSNL 1896
FPLT+ GK+KRD+VR+E S+L SNL
Sbjct: 532 FPLTTIGKIKRDQVRKEVMSQLQSLHSNL 560
>ref|XP_003594530.1| 2-succinylbenzoate-CoA ligase [Medicago truncatula]
gi|355483578|gb|AES64781.1| 2-succinylbenzoate-CoA ligase
[Medicago truncatula]
Length = 562
Score = 607 bits (1565), Expect = e-171
Identities = 312/570 (54%), Positives = 391/570 (68%), Gaps = 12/570 (2%)
Frame = +1
Query: 223 HICQCLRRISRIRLDSPFTIFGNRTKTGLQFVEGVQSLALGLSNLGLKPGHVVAIAALNS 402
HICQCL R+ R D P TI GN KTG + VE V SLA GL LG+ PG VVAI+A NS
Sbjct: 3 HICQCLSRLLTFRRDFPVTIAGNNRKTGQELVEEVVSLAHGLLQLGVTPGDVVAISAYNS 62
Query: 403 DIYLEWMLAVAYIGAIISPLNYRWSLEEARSALEILEPEMLVVDDSCAIWYFELQTYNS- 579
D+YLEW+LA+A++G I +PLNYRWS EEA+ A++ ++P MLV+D+SC WYF+ Q +
Sbjct: 63 DLYLEWLLAIAFVGGIAAPLNYRWSFEEAKLAMKAVKPVMLVIDESCYSWYFKFQQNDVP 122
Query: 580 -LRWHVCLGDPLPFVNHSDNGGLDQVLTTGTLKSVLQTSASLDYQWAPEGIVLICFTSGT 756
L+WHV L P SD VLT G LK +Y WAPEG V+ICFTSGT
Sbjct: 123 FLKWHVLLDSP-----SSDFTNKWNVLTPGILKRHHVKPLEFNYSWAPEGAVIICFTSGT 177
Query: 757 SGRPKGVAIGHTALIVQSLAKIAVAGYSEEDVYLHTAPLCHIGGISSGLAMLMVGACHVL 936
+G+PKGV I H ALI+QSLAKIA+ GYSE+DVYLHTAPLCHIGG+SS +AMLMVG CHV
Sbjct: 178 TGKPKGVTISHEALIIQSLAKIAIVGYSEDDVYLHTAPLCHIGGLSSAMAMLMVGGCHVF 237
Query: 937 LPKFVSGSVLQAIEQYHVSSLITVPAMMADLISYIRSRATWKNGESLKKILNGGGQLSPK 1116
+PKF + + IE+Y+V+SLITVPA+M LIS +R + TWK GE++KKILNGGG LS +
Sbjct: 238 MPKFDAELAVGDIERYNVTSLITVPAIMTSLISIVRRKETWKGGETVKKILNGGGSLSFE 297
Query: 1117 LIRDAAEVFPNAMLISAYG--------MTETCSSLTFMTL--NQIQCIGFKGHPQKISEV 1266
LI+D F A LISAYG MTE CSSLTF+TL + I E
Sbjct: 298 LIKDTHIFFHKAKLISAYGRSFLTQCWMTEACSSLTFLTLYDPMQKTISHPFQTYGEEES 357
Query: 1267 KPDWDNQLGVCVGKPAPHVELFVNGNGHCSIGRILTRGPHVMLKYWNQVPLKKLDSLHQG 1446
K GVCVGK APHVEL + +G GRILTRGPH+ML+YW+Q + +
Sbjct: 358 KHLIHQPQGVCVGKAAPHVELKICKDG--DTGRILTRGPHLMLRYWDQTLTNTSNQRSEV 415
Query: 1447 WLDTGDIGWLDDKGAVWLIGRSNDRIKSGGENVYPEEVEAVLSQHPGVYSIAVVGVPDAR 1626
W DTGDIG +D G +WL+GR+N RIKSGGEN+YPEEVEA+L +HPG+ + +VG+PDAR
Sbjct: 416 WFDTGDIGLMDCHGNLWLLGRTNGRIKSGGENIYPEEVEAILLEHPGIARVVIVGIPDAR 475
Query: 1627 LSEMVVACVQLQEGWKWVGHDSQSPERMDLQLTTNILYKYCKENKMTRFKIPKIFIPWRG 1806
+EMV AC+Q +E W+W+ H + + E L+ L +YC EN ++RFKIPKIFI WR
Sbjct: 476 FTEMVAACIQPRENWQWLEHSTSNEE---FHLSRKNLQQYCLENNLSRFKIPKIFIEWRK 532
Query: 1807 PFPLTSTGKLKRDEVRREATSRLHLFPSNL 1896
PFPLT+TGK++RD+VR+E S + SNL
Sbjct: 533 PFPLTTTGKIRRDQVRKEVLSEIQSLHSNL 562