BLASTX nr result

ID: Coptis24_contig00011921 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00011921
         (1242 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002262897.1| PREDICTED: uncharacterized protein At3g27210...   168   3e-39
ref|XP_002263139.1| PREDICTED: uncharacterized protein LOC100254...   155   2e-35
ref|XP_002509538.1| conserved hypothetical protein [Ricinus comm...   153   8e-35
ref|XP_004145674.1| PREDICTED: uncharacterized protein At3g27210...   151   4e-34
emb|CAN80086.1| hypothetical protein VITISV_011296 [Vitis vinifera]   146   1e-32

>ref|XP_002262897.1| PREDICTED: uncharacterized protein At3g27210-like [Vitis vinifera]
          Length = 247

 Score =  168 bits (425), Expect = 3e-39
 Identities = 108/248 (43%), Positives = 139/248 (56%), Gaps = 10/248 (4%)
 Frame = +3

Query: 234 MGSAVSVQKNPDSAMKLRFSASTKTKKIMVPS----HTKNSQDPKPQLSFMSQSSATPPL 401
           MGS VSV +NP SAMKL+ S  +K  K+++PS    H   ++ P   LS  +Q S + P+
Sbjct: 1   MGSCVSVHRNPHSAMKLKVSFGSKADKLVIPSPIKDHPSIAEPPIGGLSHKAQWSPSQPI 60

Query: 402 TSFRDNGSKDEAFFDSQAWLESDCEDDFLSVNGDFTPSRGSTSFNQSSSTGNPQFNKSHF 581
           T FRD GSK+E FFDSQ WLESD  DDF SVNGDFTPSRG+T  + + S G P  NK+ F
Sbjct: 61  TPFRDFGSKEEIFFDSQPWLESD-SDDFHSVNGDFTPSRGNTPVHPNVSIGTPHANKAPF 119

Query: 582 ADRASDLKTEPYDLASLTDKKMRLSXXXXXXXXXXXVHND------QNLRKGELETKPTK 743
            +R       P    S T +K +L+             ND      QN+  G++E K T 
Sbjct: 120 ENRVPASIPTP----SPTGRKKKLAELFEESIRNDMDGNDENILGKQNMSNGKMEVKRTI 175

Query: 744 LVNSSKSTNPITYLFPYLSRSNSVRSSDRTPSRYSDPEKEKSTKASQCCLPSLITSLSFR 923
           L    +S N      P  S  NSV S  RTP+     EKEK  +++QCCLPSL  + SF 
Sbjct: 176 LDFPPESANGT----PLASGPNSVCSGGRTPNGDFKSEKEKPLRSTQCCLPSLRLNRSFN 231

Query: 924 ERKKRPNP 947
           ERKK+ +P
Sbjct: 232 ERKKKMSP 239


>ref|XP_002263139.1| PREDICTED: uncharacterized protein LOC100254483 [Vitis vinifera]
           gi|297738401|emb|CBI27602.3| unnamed protein product
           [Vitis vinifera]
          Length = 224

 Score =  155 bits (393), Expect = 2e-35
 Identities = 101/249 (40%), Positives = 139/249 (55%), Gaps = 11/249 (4%)
 Frame = +3

Query: 234 MGSAVSVQKNPDSAMKLRFSASTKTKKIM-----VPSHTKNSQDPKPQLSFMSQSSATPP 398
           MGS VSV K+ +S MKL++S ++KT   +     V  +T ++Q  KPQL        TP 
Sbjct: 1   MGSCVSVHKSSESTMKLQWSTASKTTDSVLNESPVKENTVSTQQFKPQL--------TP- 51

Query: 399 LTSFRDNGSKDEAFFDSQAWLESDCEDDFLSVNGDFTPSRGSTSFNQSSSTGNPQFNKSH 578
             SFR+ GSK+E FFDSQ WLESDCED F S+NGD TP  G+T  NQSS    P+ ++SH
Sbjct: 52  --SFRELGSKEEVFFDSQPWLESDCED-FFSINGDSTPHHGNTPMNQSSFRETPRLDRSH 108

Query: 579 FADRASDLKTEPYDLASLTDKKMRLSXXXXXXXXXXXVHN------DQNLRKGELETKPT 740
             D++ +   EP    S +DKK  +            V N      + N+  G L+ K T
Sbjct: 109 HMDKSPNSLIEP----SPSDKKKLIELFRESFGDDPFVGNQDLQGIESNMANGRLKAKAT 164

Query: 741 KLVNSSKSTNPITYLFPYLSRSNSVRSSDRTPSRYSDPEKEKSTKASQCCLPSLITSLSF 920
                         +F +L+  N   SS+R+P++   PEKEKS  ++QCCLP L+ SLSF
Sbjct: 165 --------------IFDFLT--NRGCSSERSPNKGYKPEKEKSAHSAQCCLPGLVRSLSF 208

Query: 921 RERKKRPNP 947
            +RK+RP+P
Sbjct: 209 SDRKRRPSP 217


>ref|XP_002509538.1| conserved hypothetical protein [Ricinus communis]
           gi|223549437|gb|EEF50925.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 236

 Score =  153 bits (387), Expect = 8e-35
 Identities = 100/247 (40%), Positives = 134/247 (54%), Gaps = 6/247 (2%)
 Frame = +3

Query: 234 MGSAVSVQKN-PDSAMKLRFSASTKTKKIMVPSHTKNSQDPKPQLSFMSQSSATPPLTSF 410
           MGS  SV K  P+SAMKL  S  +K   +++P      +                P+ +F
Sbjct: 1   MGSCASVHKGTPESAMKLGVSFGSKKDNLVIPESPIKDKHVNDHT----------PIKTF 50

Query: 411 RDNGSKDEAFFDSQAWLESDCEDDFLSVNGDFTPSRGSTSFNQSSSTGNPQFNKSHFADR 590
            D+GSKDE FFDS+AWL+SDCEDDF SVNGDFTPSRG+T  + + S G P+ NK+    R
Sbjct: 51  DDHGSKDETFFDSRAWLDSDCEDDFFSVNGDFTPSRGNTPVHHNFSMGTPKINKTTLEGR 110

Query: 591 ASDLKTEPYDLASLTDKK-----MRLSXXXXXXXXXXXVHNDQNLRKGELETKPTKLVNS 755
                + P    S T KK      R S               QN+  G+ E K T L   
Sbjct: 111 PPTPGSIPE--PSPTGKKRLSELFRESLREEQEADKLDSSRMQNIGNGKTEVKQTILDVL 168

Query: 756 SKSTNPITYLFPYLSRSNSVRSSDRTPSRYSDPEKEKSTKASQCCLPSLITSLSFRERKK 935
            KS +      PY+S +NSV SS+RT +  +  E+EKS K++QCCLPSLI+  SF +RKK
Sbjct: 169 PKSASGT----PYISGANSVCSSERTANGDALIEREKSIKSAQCCLPSLISCRSFSDRKK 224

Query: 936 RPNPDLS 956
           + +P ++
Sbjct: 225 KMSPAIA 231


>ref|XP_004145674.1| PREDICTED: uncharacterized protein At3g27210-like [Cucumis sativus]
          Length = 219

 Score =  151 bits (381), Expect = 4e-34
 Identities = 99/243 (40%), Positives = 140/243 (57%), Gaps = 2/243 (0%)
 Frame = +3

Query: 234 MGSAVSVQKNPDSAMKLRFSASTKTKKIMVP-SHTKNSQDPKPQLSFMSQSSATPPLTSF 410
           MGS  S+ +NPDSAMK + S ++KT  + +P S  K +  P     F+   ++   L   
Sbjct: 1   MGSCASIHRNPDSAMKFKLSLASKTTDMEIPPSPIKQNNTPINPTVFLKSQTSPSHL--- 57

Query: 411 RDNGSKDEAFFDSQAWLESDCEDDFLSVNGDFTPSRGSTSFNQSSSTGNPQFNKSHFADR 590
              GSKDEAFFDS+ WL+SDCEDDF SVNGDFTPSRG+T  + S S+G P+ N+ H  D 
Sbjct: 58  ---GSKDEAFFDSRGWLDSDCEDDFYSVNGDFTPSRGNTPVHSSFSSGTPRINQVHGIDD 114

Query: 591 ASDLK-TEPYDLASLTDKKMRLSXXXXXXXXXXXVHNDQNLRKGELETKPTKLVNSSKST 767
            + +   EP    S T KK RL+           +  + +    + + KPT L   +  +
Sbjct: 115 QTPITIPEP----SPTGKK-RLA----------ELFRESSRNGTDRQAKPT-LNELALQS 158

Query: 768 NPITYLFPYLSRSNSVRSSDRTPSRYSDPEKEKSTKASQCCLPSLITSLSFRERKKRPNP 947
           NP T   PY+S +NSV SS+RTP+     EKE+   + QCCLPSL +  SF +R+K+ +P
Sbjct: 159 NPET---PYISGTNSVCSSERTPNGDVWGEKERPFGSVQCCLPSLGSCHSFGDRRKKASP 215

Query: 948 DLS 956
            ++
Sbjct: 216 AIA 218


>emb|CAN80086.1| hypothetical protein VITISV_011296 [Vitis vinifera]
          Length = 266

 Score =  146 bits (368), Expect = 1e-32
 Identities = 99/260 (38%), Positives = 136/260 (52%), Gaps = 22/260 (8%)
 Frame = +3

Query: 234 MGSAVSVQKNPDSAMKLRFSASTKTKKIM-----VPSHTKNSQDPKPQLSFMSQSSATPP 398
           MGS VSV K+ +S MKL++S ++KT   +     V  +T N+Q  KPQL+          
Sbjct: 1   MGSCVSVHKSSESTMKLQWSTASKTTDSVLNESPVKENTVNTQQFKPQLTPSFPGIGYDI 60

Query: 399 LT-----------SFRDNGSKDEAFFDSQAWLESDCEDDFLSVNGDFTPSRGSTSFNQSS 545
           L             F   GSK+E FFDSQ WLESDCED F S+NGD TP  G+T  NQSS
Sbjct: 61  LFWIAYLHSWFSFGFDYPGSKEEVFFDSQPWLESDCED-FFSINGDSTPHHGNTPMNQSS 119

Query: 546 STGNPQFNKSHFADRASDLKTEPYDLASLTDKKMRLSXXXXXXXXXXXVHN------DQN 707
               P+ ++SH  D++ +   EP    S +DKK  +            V N      + N
Sbjct: 120 FRETPRLDRSHHMDKSPNSLIEP----SPSDKKKLIELFRESFGDDPFVGNQDLQGIESN 175

Query: 708 LRKGELETKPTKLVNSSKSTNPITYLFPYLSRSNSVRSSDRTPSRYSDPEKEKSTKASQC 887
           +  G L+ K T              +F +L+  N   SS+R+P++   PEKEKS  ++QC
Sbjct: 176 MANGRLKXKAT--------------IFDFLT--NRGCSSERSPNKGYKPEKEKSAHSAQC 219

Query: 888 CLPSLITSLSFRERKKRPNP 947
           CLP L+ SLSF +RK+RP+P
Sbjct: 220 CLPGLVRSLSFSDRKRRPSP 239


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