BLASTX nr result

ID: Coptis24_contig00011909 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00011909
         (1008 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004158975.1| PREDICTED: endo-1,4-beta-xylanase A-like [Cu...   168   2e-39
ref|XP_004146424.1| PREDICTED: endo-1,4-beta-xylanase A-like [Cu...   168   2e-39
emb|CBI19342.3| unnamed protein product [Vitis vinifera]              166   1e-38
ref|XP_002283550.1| PREDICTED: endo-1,4-beta-xylanase A-like [Vi...   166   1e-38
ref|XP_002510025.1| hydrolase, hydrolyzing O-glycosyl compounds,...   163   7e-38

>ref|XP_004158975.1| PREDICTED: endo-1,4-beta-xylanase A-like [Cucumis sativus]
          Length = 905

 Score =  168 bits (426), Expect = 2e-39
 Identities = 101/235 (42%), Positives = 138/235 (58%), Gaps = 6/235 (2%)
 Frame = -1

Query: 921 GGGTIDEENIILNPRFDDGLSHWSGRGQGNPFIVEKFV---KILPVSGQYFSYTTNRTET 751
           G     +ENIILNP+FDD L +WS RG     +V   +   K+LP SG++F+  T RT++
Sbjct: 185 GKDNASDENIILNPKFDDDLKNWSARGC--KIVVHDSMGNGKVLPQSGKFFASATERTQS 242

Query: 750 WHGIQQEITGRVQEKVDYEVAAVVSPVCNNSEMTALVQITLWVQKWDGQELYTCIALPTC 571
           W+GIQQEITGRVQ K+ Y+V AVV  V  N+  T  V+ TLWVQ  + ++ Y  IA    
Sbjct: 243 WNGIQQEITGRVQRKLAYDVVAVVR-VFGNNITTTDVRATLWVQTPNSRDQYIGIANV-- 299

Query: 570 RLQLRQASTKAWTVMQGQFKLDSVPARAIIFIEGPPGGVAILMDSLIVKPARVQPPKPPT 391
                QA+ K W  +QG+F L++ P++ +I+IEGPP GV IL+DSLIVK A+  PP PP 
Sbjct: 300 -----QATDKDWVQLQGKFLLNASPSKVVIYIEGPPSGVDILIDSLIVKHAQKIPPSPPP 354

Query: 390 VIENVSFGXXXXXXXXXXXDLR---PLFECALRIGTGPDFSYKLLSPVTNFSVGP 235
             EN ++G                 PL  C L +GTG   S  ++ P+   S+GP
Sbjct: 355 SYENPAYGFNIIENSNLSNGTNGWFPLGSCTLNVGTG---SPHIVPPMARDSLGP 406



 Score = 58.9 bits (141), Expect = 2e-06
 Identities = 45/159 (28%), Positives = 71/159 (44%), Gaps = 4/159 (2%)
 Frame = -1

Query: 897 NIILNPRFDDGLSHWSGRGQGNPFIVEKFVKILPVSGQY---FSYTTNRTETWHGIQQEI 727
           NI+ N  F  GL HW          + K   +   S      ++  T+R E W G++QEI
Sbjct: 22  NILQNHDFSMGLQHWHPNCCNGYVTLAKSNNLDEASHSSCARYAIATDRNECWQGLEQEI 81

Query: 726 TGRVQEKVDYEVAAVVSPVCNNSEMTALVQITLWVQKWDGQELYTCIALPTCRLQLRQAS 547
           T  +   + Y V+A+V  V  + +  A V  TL +   D    Y  I         R + 
Sbjct: 82  TNSIIPGITYSVSAIVG-VSGSLQGFADVLATLKLVYKDSTINYLGIG--------RSSV 132

Query: 546 TK-AWTVMQGQFKLDSVPARAIIFIEGPPGGVAILMDSL 433
            K  W  + G F L ++P R + ++EGP  G+ +L+ S+
Sbjct: 133 LKDKWEKLDGTFSLSTMPDRVVFYLEGPSPGIDLLIQSV 171


>ref|XP_004146424.1| PREDICTED: endo-1,4-beta-xylanase A-like [Cucumis sativus]
          Length = 913

 Score =  168 bits (426), Expect = 2e-39
 Identities = 101/235 (42%), Positives = 138/235 (58%), Gaps = 6/235 (2%)
 Frame = -1

Query: 921 GGGTIDEENIILNPRFDDGLSHWSGRGQGNPFIVEKFV---KILPVSGQYFSYTTNRTET 751
           G     +ENIILNP+FDD L +WS RG     +V   +   K+LP SG++F+  T RT++
Sbjct: 193 GKDNASDENIILNPKFDDDLKNWSARGC--KIVVHDSMGNGKVLPQSGKFFASATERTQS 250

Query: 750 WHGIQQEITGRVQEKVDYEVAAVVSPVCNNSEMTALVQITLWVQKWDGQELYTCIALPTC 571
           W+GIQQEITGRVQ K+ Y+V AVV  V  N+  T  V+ TLWVQ  + ++ Y  IA    
Sbjct: 251 WNGIQQEITGRVQRKLAYDVVAVVR-VFGNNITTTDVRATLWVQTPNSRDQYIGIANV-- 307

Query: 570 RLQLRQASTKAWTVMQGQFKLDSVPARAIIFIEGPPGGVAILMDSLIVKPARVQPPKPPT 391
                QA+ K W  +QG+F L++ P++ +I+IEGPP GV IL+DSLIVK A+  PP PP 
Sbjct: 308 -----QATDKDWVQLQGKFLLNASPSKVVIYIEGPPSGVDILIDSLIVKHAQKIPPSPPP 362

Query: 390 VIENVSFGXXXXXXXXXXXDLR---PLFECALRIGTGPDFSYKLLSPVTNFSVGP 235
             EN ++G                 PL  C L +GTG   S  ++ P+   S+GP
Sbjct: 363 SYENPAYGFNIIENSNLSNGTNGWFPLGSCTLNVGTG---SPHIVPPMARDSLGP 414



 Score = 60.8 bits (146), Expect = 5e-07
 Identities = 50/186 (26%), Positives = 79/186 (42%), Gaps = 4/186 (2%)
 Frame = -1

Query: 978 STTQNNTKCLKQHFQRLQMGGGTIDEENIILNPRFDDGLSHWSGRGQGNPFIVEKFVKIL 799
           +T QNN   L +  +            NI+ N  F  GL HW          + K   + 
Sbjct: 3   TTQQNNATQLPKDVEETPAKLSPPRAANILQNHDFSMGLQHWHPNCCNGYVTLAKSNNLD 62

Query: 798 PVSGQY---FSYTTNRTETWHGIQQEITGRVQEKVDYEVAAVVSPVCNNSEMTALVQITL 628
             S      ++  T+R E W G++QEIT  +   + Y V+A+V  V  + +  A V  TL
Sbjct: 63  EASHSSCARYAIATDRNECWQGLEQEITNSIIPGITYSVSAIVG-VSGSLQGFADVLATL 121

Query: 627 WVQKWDGQELYTCIALPTCRLQLRQASTK-AWTVMQGQFKLDSVPARAIIFIEGPPGGVA 451
            +   D    Y  I         R +  K  W  + G F L ++P R + ++EGP  G+ 
Sbjct: 122 KLVYKDSTINYLGIG--------RSSVLKDKWEKLDGTFSLSTMPDRVVFYLEGPSPGID 173

Query: 450 ILMDSL 433
           +L+ S+
Sbjct: 174 LLIQSV 179


>emb|CBI19342.3| unnamed protein product [Vitis vinifera]
          Length = 911

 Score =  166 bits (419), Expect = 1e-38
 Identities = 101/236 (42%), Positives = 144/236 (61%), Gaps = 9/236 (3%)
 Frame = -1

Query: 903 EENIILNPRFDDGLSHWSGRGQGNPFIVEKFV---KILPVSGQYFSYTTNRTETWHGIQQ 733
           +ENIILNP F+DG+++WSGRG     ++   +   KI+P SG++F+  T RT++W+GIQQ
Sbjct: 231 DENIILNPIFEDGVNNWSGRGC--KILLHDSMGGGKIVPQSGKFFASATERTQSWNGIQQ 288

Query: 732 EITGRVQEKVDYEVAAVVSPVCNNSEMTALVQITLWVQKWDGQELYTCIALPTCRLQLRQ 553
           EITGRVQ K+ YEVAAVV  +  N+  +A V++TLWVQ  + +E Y  +A         Q
Sbjct: 289 EITGRVQRKLAYEVAAVVR-IFGNNVTSADVRVTLWVQTPNLREQYIGVANS-------Q 340

Query: 552 ASTKAWTVMQGQFKLDSVPARAIIFIEGPPGGVAILMDSLIVKPARVQPPKPPTVIENVS 373
           A+ K W  +QG+F L++ P+R +I++EGPP G  IL++SL+VK A   PP PP VIE+ +
Sbjct: 341 ATDKDWIQLQGKFLLNASPSRVVIYLEGPPPGTDILVNSLVVKHAEKIPPSPPPVIEDPA 400

Query: 372 FGXXXXXXXXXXXDLR---PLFECALRIGTGPDFSYKLLSPVTNFSVG---PFSVH 223
           FG                 PL  C L + TG   S ++L P+   S+G   P S H
Sbjct: 401 FGINTIQNSNLNDGSNGWFPLGSCTLSVATG---SPRILPPMARDSLGAHNPLSGH 453



 Score = 75.1 bits (183), Expect = 3e-11
 Identities = 51/160 (31%), Positives = 84/160 (52%), Gaps = 3/160 (1%)
 Frame = -1

Query: 897 NIILNPRFDDGLSHWS-GRGQGNPFIVEK-FVKILPV-SGQYFSYTTNRTETWHGIQQEI 727
           NIILN  F  GL  W+     G+    E  F++ + V SG  ++  TNR E W G++Q+I
Sbjct: 60  NIILNHDFSRGLHSWNLNCCNGSVVSAESGFLEGISVKSGGNYAVITNRKECWQGLEQDI 119

Query: 726 TGRVQEKVDYEVAAVVSPVCNNSEMTALVQITLWVQKWDGQELYTCIALPTCRLQLRQAS 547
           T RV     Y V+A V  V  + + +A+VQ TL ++       Y  I   +        S
Sbjct: 120 TSRVSLGSTYSVSACVG-VSGSLQGSAVVQATLKLEYQGSATSYLFIGRTS-------VS 171

Query: 546 TKAWTVMQGQFKLDSVPARAIIFIEGPPGGVAILMDSLIV 427
            + W  ++G F L ++P R + ++EGP  G+ +L++S+++
Sbjct: 172 REQWKKLEGTFSLSTMPDRVVFYLEGPSPGLDLLIESVVI 211


>ref|XP_002283550.1| PREDICTED: endo-1,4-beta-xylanase A-like [Vitis vinifera]
          Length = 981

 Score =  166 bits (419), Expect = 1e-38
 Identities = 101/236 (42%), Positives = 144/236 (61%), Gaps = 9/236 (3%)
 Frame = -1

Query: 903 EENIILNPRFDDGLSHWSGRGQGNPFIVEKFV---KILPVSGQYFSYTTNRTETWHGIQQ 733
           +ENIILNP F+DG+++WSGRG     ++   +   KI+P SG++F+  T RT++W+GIQQ
Sbjct: 265 DENIILNPIFEDGVNNWSGRGC--KILLHDSMGGGKIVPQSGKFFASATERTQSWNGIQQ 322

Query: 732 EITGRVQEKVDYEVAAVVSPVCNNSEMTALVQITLWVQKWDGQELYTCIALPTCRLQLRQ 553
           EITGRVQ K+ YEVAAVV  +  N+  +A V++TLWVQ  + +E Y  +A         Q
Sbjct: 323 EITGRVQRKLAYEVAAVVR-IFGNNVTSADVRVTLWVQTPNLREQYIGVANS-------Q 374

Query: 552 ASTKAWTVMQGQFKLDSVPARAIIFIEGPPGGVAILMDSLIVKPARVQPPKPPTVIENVS 373
           A+ K W  +QG+F L++ P+R +I++EGPP G  IL++SL+VK A   PP PP VIE+ +
Sbjct: 375 ATDKDWIQLQGKFLLNASPSRVVIYLEGPPPGTDILVNSLVVKHAEKIPPSPPPVIEDPA 434

Query: 372 FGXXXXXXXXXXXDLR---PLFECALRIGTGPDFSYKLLSPVTNFSVG---PFSVH 223
           FG                 PL  C L + TG   S ++L P+   S+G   P S H
Sbjct: 435 FGINTIQNSNLNDGSNGWFPLGSCTLSVATG---SPRILPPMARDSLGAHNPLSGH 487



 Score = 76.3 bits (186), Expect = 1e-11
 Identities = 56/189 (29%), Positives = 93/189 (49%), Gaps = 3/189 (1%)
 Frame = -1

Query: 984 HFSTTQNNTKCLKQHFQRLQMGGGTIDEENIILNPRFDDGLSHWS-GRGQGNPFIVEK-F 811
           +F   QN     KQ+   ++         NIILN  F  GL  W+     G+    E  F
Sbjct: 67  YFCAQQNKPLSKKQNESTIKSRDSL--SSNIILNHDFSRGLHSWNLNCCNGSVVSAESGF 124

Query: 810 VKILPV-SGQYFSYTTNRTETWHGIQQEITGRVQEKVDYEVAAVVSPVCNNSEMTALVQI 634
           ++ + V SG  ++  TNR E W G++Q+IT RV     Y V+A V  V  + + +A+VQ 
Sbjct: 125 LEGISVKSGGNYAVITNRKECWQGLEQDITSRVSLGSTYSVSACVG-VSGSLQGSAVVQA 183

Query: 633 TLWVQKWDGQELYTCIALPTCRLQLRQASTKAWTVMQGQFKLDSVPARAIIFIEGPPGGV 454
           TL ++       Y  I   +        S + W  ++G F L ++P R + ++EGP  G+
Sbjct: 184 TLKLEYQGSATSYLFIGRTS-------VSREQWKKLEGTFSLSTMPDRVVFYLEGPSPGL 236

Query: 453 AILMDSLIV 427
            +L++S+++
Sbjct: 237 DLLIESVVI 245


>ref|XP_002510025.1| hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus
           communis] gi|223550726|gb|EEF52212.1| hydrolase,
           hydrolyzing O-glycosyl compounds, putative [Ricinus
           communis]
          Length = 644

 Score =  163 bits (412), Expect = 7e-38
 Identities = 97/229 (42%), Positives = 135/229 (58%), Gaps = 6/229 (2%)
 Frame = -1

Query: 903 EENIILNPRFDDGLSHWSGRGQGNPFIVEKFV---KILPVSGQYFSYTTNRTETWHGIQQ 733
           ++NIILNP+F+DGL++WSGRG     ++   +   KI+P+SG+ F+  T RT++W+GIQQ
Sbjct: 184 DQNIILNPKFEDGLNNWSGRGC--KVVLHDSMEDGKIVPMSGKVFASATERTQSWNGIQQ 241

Query: 732 EITGRVQEKVDYEVAAVVSPVCNNSEMTALVQITLWVQKWDGQELYTCIALPTCRLQLRQ 553
           EITGRVQ K+ YE  A+V  +  N+   A V+ TLWVQ  D +E Y  IA         Q
Sbjct: 242 EITGRVQRKLAYEAIALVR-IFGNNVTNADVRATLWVQTPDFREQYIGIAN-------LQ 293

Query: 552 ASTKAWTVMQGQFKLDSVPARAIIFIEGPPGGVAILMDSLIVKPARVQPPKPPTVIENVS 373
           A+ K W  +QG+F L+  P R +I+IEGPP G  IL++S +VK A   PP PP +IEN +
Sbjct: 294 ATDKDWVQLQGKFLLNGSPKRVVIYIEGPPAGTDILVNSFVVKHAEKIPPSPPPLIENPA 353

Query: 372 FGXXXXXXXXXXXDLR---PLFECALRIGTGPDFSYKLLSPVTNFSVGP 235
           +G                 PL  C L + TG   S  +L P+   S+GP
Sbjct: 354 YGVNIIQNSNLNDGTNVWFPLGNCTLSVATG---SPHILPPMARESLGP 399



 Score = 74.3 bits (181), Expect = 4e-11
 Identities = 54/167 (32%), Positives = 83/167 (49%), Gaps = 10/167 (5%)
 Frame = -1

Query: 897 NIILNPRFDDGLSHWSGRGQGNPFIVEKFVK--------ILPVSGQYFSYTTNRTETWHG 742
           NII+N  F +GL  W      +P   + FV          LP SG  ++  +NR E W G
Sbjct: 19  NIIINHDFSEGLHSW------HPNCCDGFVVSAESCHPGFLPNSGGKYAAVSNRKECWQG 72

Query: 741 IQQEITGRVQEKVDYEVAAVVSPVCNNSEMTALVQITLWVQKWDGQELYTCIALPTCRLQ 562
           ++Q+IT RV     Y V+A V  V    +  + V  TL ++  D         LPT  L 
Sbjct: 73  LEQDITSRVSPGSSYSVSACVG-VSGPFQGPSDVLATLKLEYRD---------LPTDFLF 122

Query: 561 LRQ--ASTKAWTVMQGQFKLDSVPARAIIFIEGPPGGVAILMDSLIV 427
           + +   S + W  ++G F L ++P R + ++EGP  GV +L+DS+I+
Sbjct: 123 IGKTCVSKERWEKLEGTFSLSTMPNRVVFYLEGPSPGVDLLIDSVII 169


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