BLASTX nr result
ID: Coptis24_contig00011899
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00011899
(1577 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002273999.2| PREDICTED: APO protein 4, mitochondrial-like... 450 e-124
ref|XP_002527241.1| APO protein 4, mitochondrial precursor, puta... 432 e-118
ref|XP_002327942.1| predicted protein [Populus trichocarpa] gi|2... 427 e-117
ref|XP_004151879.1| PREDICTED: APO protein 4, mitochondrial-like... 416 e-113
ref|XP_004158556.1| PREDICTED: APO protein 4, mitochondrial-like... 414 e-113
>ref|XP_002273999.2| PREDICTED: APO protein 4, mitochondrial-like [Vitis vinifera]
Length = 329
Score = 450 bits (1158), Expect = e-124
Identities = 213/323 (65%), Positives = 260/323 (80%), Gaps = 1/323 (0%)
Frame = +2
Query: 416 MALTQRVSRDLLKELSAHLLQSKCYYSSKINWSKLRPMIHKRIENRSSKYPLKSMVPVAY 595
MAL ++ L E S + ++ +YS K++ KLRPMI KRIENR+ +YP+ SM+PVA
Sbjct: 1 MALRGKLWHCFLDEASGFAMYAR-FYSVKVDLKKLRPMILKRIENRAKEYPISSMIPVAQ 59
Query: 596 AVLDARAILFQGVSTLLKYIPVKACKFCPQVFIGEKGHLIESCYGFRRRAKNQVHEWIDG 775
VL AR++L QGVSTL+ PV ACKFCP+V+IGE+GHLI++CYG++RR+KNQVHEWI G
Sbjct: 60 DVLKARSLLIQGVSTLMNVFPVMACKFCPEVYIGEQGHLIQTCYGYKRRSKNQVHEWISG 119
Query: 776 SLNDILVPVEAFHLHNIFQDLIKHDQRFDFDRIPAALELCCQAGANIYEENLHSCNWASD 955
SLNDILVPVE FHL +FQD+IKH QRFDFDR+PA ELC QAGA++ EENL S +W S+
Sbjct: 120 SLNDILVPVETFHLQKMFQDVIKHHQRFDFDRVPAVFELCLQAGADLDEENLSSSSWKSE 179
Query: 956 TNENGV-AADSRTQQELQSVAIETLEAWENLRSGVQRLLLVYPAKVCKHCSEVHVGPSGH 1132
+ +GV S + EL+ VA TL AWE LRSG++RLLLVYPAKVCK+CSEVHVGPSGH
Sbjct: 180 STFSGVHGTKSLSPDELKFVATGTLRAWEVLRSGIRRLLLVYPAKVCKYCSEVHVGPSGH 239
Query: 1133 KARLCGVFKHESWRGSHMWKKAEVDDFIPPKVVWRRRPQDPLVLCNEGRDFYGHAPAVVE 1312
KARLCGVFK+ESWRG+H WKKA+VDD +PPK+VWR+RPQDP VL NEGRDFYGHAPAVV+
Sbjct: 240 KARLCGVFKYESWRGAHFWKKADVDDLVPPKIVWRQRPQDPPVLVNEGRDFYGHAPAVVD 299
Query: 1313 LCFQAGAVVHNKYHCMMKVNGLP 1381
LC +AGA+ +YH MMKV GLP
Sbjct: 300 LCTKAGAIAPARYHSMMKVQGLP 322
>ref|XP_002527241.1| APO protein 4, mitochondrial precursor, putative [Ricinus communis]
gi|223533417|gb|EEF35167.1| APO protein 4, mitochondrial
precursor, putative [Ricinus communis]
Length = 325
Score = 432 bits (1110), Expect = e-118
Identities = 204/322 (63%), Positives = 257/322 (79%), Gaps = 1/322 (0%)
Frame = +2
Query: 416 MALTQRVSRDLLKELSAHLLQSKCYYSSKINWSKLRPMIHKRIENRSSKYPLKSMVPVAY 595
MA +++ +D + H+ + +YSS+++W KLRPMI KRIENR+ YP++ +VPVA+
Sbjct: 1 MASRKKIWQDFARFYGNHITHFR-FYSSQVDWKKLRPMILKRIENRAKDYPVRDLVPVAH 59
Query: 596 AVLDARAILFQGVSTLLKYIPVKACKFCPQVFIGEKGHLIESCYGFRRRAKNQVHEWIDG 775
VL AR +L QGVSTL++ IPV ACKFCP+V IGE+GHLI++C+G+RR AKN+VHEWI G
Sbjct: 60 EVLQARMLLIQGVSTLIQVIPVVACKFCPEVHIGERGHLIQTCWGYRRGAKNRVHEWIGG 119
Query: 776 SLNDILVPVEAFHLHNIFQDLIKHDQRFDFDRIPAALELCCQAGANIYEENLHSCNWASD 955
LNDILVPVE F L++ FQ +IKHDQRFDFDR+PA +ELC QAGA + +ENL+ +SD
Sbjct: 120 GLNDILVPVETFRLNSTFQKVIKHDQRFDFDRVPAIVELCRQAGAYVTDENLYYGLRSSD 179
Query: 956 TNENGV-AADSRTQQELQSVAIETLEAWENLRSGVQRLLLVYPAKVCKHCSEVHVGPSGH 1132
NGV A+S + ++LQ VA TL AWE LRSGVQRLLLVY AKVCK+CSE+HVGPSGH
Sbjct: 180 NVINGVDKAESLSAEDLQFVANGTLRAWETLRSGVQRLLLVYQAKVCKYCSEIHVGPSGH 239
Query: 1133 KARLCGVFKHESWRGSHMWKKAEVDDFIPPKVVWRRRPQDPLVLCNEGRDFYGHAPAVVE 1312
KAR CG+FK+ESWRGSH W++A VDD +PPK+VWRRRPQDP VL NEGR+FYGHAPA+V+
Sbjct: 240 KARHCGIFKYESWRGSHFWERARVDDLVPPKIVWRRRPQDPPVLLNEGRNFYGHAPAIVD 299
Query: 1313 LCFQAGAVVHNKYHCMMKVNGL 1378
LC +AGA+ KY+CMMK GL
Sbjct: 300 LCTKAGAIAPTKYYCMMKNQGL 321
>ref|XP_002327942.1| predicted protein [Populus trichocarpa] gi|222837351|gb|EEE75730.1|
predicted protein [Populus trichocarpa]
Length = 308
Score = 427 bits (1097), Expect = e-117
Identities = 198/298 (66%), Positives = 237/298 (79%), Gaps = 1/298 (0%)
Frame = +2
Query: 488 YYSSKINWSKLRPMIHKRIENRSSKYPLKSMVPVAYAVLDARAILFQGVSTLLKYIPVKA 667
+YSS++++ KLRPMI KRI+NR+ YP+K MVPVA VL+ R +L QGVSTL++ PV A
Sbjct: 5 FYSSRVDFKKLRPMILKRIQNRAKDYPVKGMVPVAREVLEKRKLLIQGVSTLMEVFPVLA 64
Query: 668 CKFCPQVFIGEKGHLIESCYGFRRRAKNQVHEWIDGSLNDILVPVEAFHLHNIFQDLIKH 847
CKFCP+V+IGEKGHLI++CYG++R + +VHEWI G LNDILVPVE F L N+FQD+I+H
Sbjct: 65 CKFCPEVYIGEKGHLIQTCYGYKRCGRKRVHEWIPGGLNDILVPVETFRLDNMFQDVIEH 124
Query: 848 DQRFDFDRIPAALELCCQAGANIYEENLHSCNWASDTNENGV-AADSRTQQELQSVAIET 1024
DQRFDFDR+PA +ELC QAGANI +ENLH D + + + L +A E
Sbjct: 125 DQRFDFDRVPAVVELCRQAGANIDDENLHPGMLDLDGGIGHIDGGEPFSPSHLMYIAKEI 184
Query: 1025 LEAWENLRSGVQRLLLVYPAKVCKHCSEVHVGPSGHKARLCGVFKHESWRGSHMWKKAEV 1204
L+AWE LRSGVQRLLLVYP+KVCKHCSEVH+GPSGHKARLCGVFK ESW G H WKKAEV
Sbjct: 185 LDAWEKLRSGVQRLLLVYPSKVCKHCSEVHIGPSGHKARLCGVFKFESWHGKHFWKKAEV 244
Query: 1205 DDFIPPKVVWRRRPQDPLVLCNEGRDFYGHAPAVVELCFQAGAVVHNKYHCMMKVNGL 1378
DD +PPK+VWRRRPQDPLVL NEGRDFYGHAPAVV+LC + G +V KY CMMK+ GL
Sbjct: 245 DDLVPPKIVWRRRPQDPLVLVNEGRDFYGHAPAVVDLCTKTGIIVPTKYSCMMKIQGL 302
>ref|XP_004151879.1| PREDICTED: APO protein 4, mitochondrial-like [Cucumis sativus]
Length = 330
Score = 416 bits (1068), Expect = e-113
Identities = 194/323 (60%), Positives = 248/323 (76%)
Frame = +2
Query: 416 MALTQRVSRDLLKELSAHLLQSKCYYSSKINWSKLRPMIHKRIENRSSKYPLKSMVPVAY 595
MA+ ++ ++++E + +CY SSK+N KLRPMI KRI++R+ YP+K M PVA
Sbjct: 7 MAIRRKFRDNVVQEF----MLQRCY-SSKVNLKKLRPMILKRIQDRAKNYPIKGMTPVAQ 61
Query: 596 AVLDARAILFQGVSTLLKYIPVKACKFCPQVFIGEKGHLIESCYGFRRRAKNQVHEWIDG 775
VL+ARA+L GVSTLLK PV +CKFCP+V++GE+GHLI SC G++R AKNQVH+WI G
Sbjct: 62 QVLEARAMLIHGVSTLLKSFPVLSCKFCPEVYVGEEGHLIRSCGGYKRGAKNQVHQWIRG 121
Query: 776 SLNDILVPVEAFHLHNIFQDLIKHDQRFDFDRIPAALELCCQAGANIYEENLHSCNWASD 955
L DI+VPVEAFHLH++FQD+IKHD+RF+F+R+PA +ELC QAGAN ++NL S S
Sbjct: 122 DLKDIIVPVEAFHLHHMFQDVIKHDERFNFERVPAVVELCSQAGANPDDKNLASSTQNSA 181
Query: 956 TNENGVAADSRTQQELQSVAIETLEAWENLRSGVQRLLLVYPAKVCKHCSEVHVGPSGHK 1135
+ + E+ +A ET+ AWE LR+GVQ+LL+VYP KVCK+CSEVHVGPSGHK
Sbjct: 182 EGGGSGMDEPLSDHEMMLLATETIRAWETLRTGVQKLLMVYPTKVCKYCSEVHVGPSGHK 241
Query: 1136 ARLCGVFKHESWRGSHMWKKAEVDDFIPPKVVWRRRPQDPLVLCNEGRDFYGHAPAVVEL 1315
ARLCGVF +ESWRGSH W+KA+VDD +PPK+VW RR QDP VL ++G+D+YGHAPAVV L
Sbjct: 242 ARLCGVFTYESWRGSHFWEKADVDDLVPPKIVWHRRQQDPPVLVDKGKDYYGHAPAVVAL 301
Query: 1316 CFQAGAVVHNKYHCMMKVNGLPP 1384
C QAG + KYHCMMKV GL P
Sbjct: 302 CTQAGVIAPFKYHCMMKVQGLSP 324
>ref|XP_004158556.1| PREDICTED: APO protein 4, mitochondrial-like [Cucumis sativus]
Length = 330
Score = 414 bits (1063), Expect = e-113
Identities = 193/323 (59%), Positives = 248/323 (76%)
Frame = +2
Query: 416 MALTQRVSRDLLKELSAHLLQSKCYYSSKINWSKLRPMIHKRIENRSSKYPLKSMVPVAY 595
MA+ ++ ++++E + +CY SSK+N KLRPMI KRI++R+ YP+K M PVA
Sbjct: 7 MAIRRKFRDNVVQEF----MLQRCY-SSKVNLKKLRPMILKRIQDRAKNYPIKGMTPVAQ 61
Query: 596 AVLDARAILFQGVSTLLKYIPVKACKFCPQVFIGEKGHLIESCYGFRRRAKNQVHEWIDG 775
VL+ARA+L GVSTLLK PV +CKFCP+V++GE+GHLI SC G++R AKNQVH+WI G
Sbjct: 62 QVLEARAMLIHGVSTLLKSFPVLSCKFCPEVYVGEEGHLIRSCGGYKRGAKNQVHQWIRG 121
Query: 776 SLNDILVPVEAFHLHNIFQDLIKHDQRFDFDRIPAALELCCQAGANIYEENLHSCNWASD 955
L DI+VPVEAFHLH++FQD+IKHD+RF+F+R+PA +ELC QAGAN +++L S S
Sbjct: 122 DLKDIIVPVEAFHLHHMFQDVIKHDERFNFERVPAVVELCSQAGANPDDKDLASSTQNSA 181
Query: 956 TNENGVAADSRTQQELQSVAIETLEAWENLRSGVQRLLLVYPAKVCKHCSEVHVGPSGHK 1135
+ + E+ +A ET+ AWE LR+GVQ+LL+VYP KVCK+CSEVHVGPSGHK
Sbjct: 182 EGGGSGMDEPLSDHEMMLLATETIRAWETLRTGVQKLLMVYPTKVCKYCSEVHVGPSGHK 241
Query: 1136 ARLCGVFKHESWRGSHMWKKAEVDDFIPPKVVWRRRPQDPLVLCNEGRDFYGHAPAVVEL 1315
ARLCGVF +ESWRGSH W+KA+VDD +PPK+VW RR QDP VL ++G+D+YGHAPAVV L
Sbjct: 242 ARLCGVFTYESWRGSHFWEKADVDDLVPPKIVWHRRQQDPPVLVDKGKDYYGHAPAVVAL 301
Query: 1316 CFQAGAVVHNKYHCMMKVNGLPP 1384
C QAG + KYHCMMKV GL P
Sbjct: 302 CTQAGVIAPFKYHCMMKVQGLSP 324