BLASTX nr result
ID: Coptis24_contig00011887
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00011887 (778 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002321383.1| predicted protein [Populus trichocarpa] gi|2... 58 2e-06 >ref|XP_002321383.1| predicted protein [Populus trichocarpa] gi|222868379|gb|EEF05510.1| predicted protein [Populus trichocarpa] Length = 497 Score = 58.2 bits (139), Expect = 2e-06 Identities = 59/244 (24%), Positives = 97/244 (39%), Gaps = 6/244 (2%) Frame = -3 Query: 725 CIDCWIPRTLKXXXXXXXXXXXXXXXXXXXXXXXXDTPRVETEGNPKSIEDKVKDAKSNA 546 CIDCW+P+++ + R +T +S+ED VKDA Sbjct: 207 CIDCWVPKSVAIKRGKVCGV----------------SKRNDTGVLGRSLEDVVKDAACTV 250 Query: 545 EMKVANAAKVREEXXXXXXXXXXXXXXXXXXXXXXXXANGEVQGDGSCCPVVDDAELALR 366 + KV +A + RE G + + + VDD ELA + Sbjct: 251 QEKVESAVRARELAVRKALEARKAADVARKALDLVANNEGGKENNDN----VDDIELAFQ 306 Query: 365 LHRAINSSPRIFRNMRSVKLENLVDPKEVKLNASSLSRQSDPEKRVLNGELK------VC 204 LHRA+NSSPRI N+ V L ++ + + E R+ N EL+ Sbjct: 307 LHRAMNSSPRISSNLCLVNSSCL---------GVTMIGEGNGEMRIRNSELRNLGAFGKL 357 Query: 203 TGNIGKAASGRKSSESVSDIGPVKKSDHADCNIENPTKEEQASCSSKVAVSSENGNSTDS 24 G + K+ + + +D G ++ D N+ ++++ S +K+ S N S +S Sbjct: 358 DGFMSKSVDVGRRKSNGNDDGVIRPDAKKDRNV--GMQQQEQSFFNKLINSRGNDCSVNS 415 Query: 23 GSQS 12 QS Sbjct: 416 DFQS 419