BLASTX nr result

ID: Coptis24_contig00011887 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00011887
         (778 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002321383.1| predicted protein [Populus trichocarpa] gi|2...    58   2e-06

>ref|XP_002321383.1| predicted protein [Populus trichocarpa] gi|222868379|gb|EEF05510.1|
           predicted protein [Populus trichocarpa]
          Length = 497

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 59/244 (24%), Positives = 97/244 (39%), Gaps = 6/244 (2%)
 Frame = -3

Query: 725 CIDCWIPRTLKXXXXXXXXXXXXXXXXXXXXXXXXDTPRVETEGNPKSIEDKVKDAKSNA 546
           CIDCW+P+++                          + R +T    +S+ED VKDA    
Sbjct: 207 CIDCWVPKSVAIKRGKVCGV----------------SKRNDTGVLGRSLEDVVKDAACTV 250

Query: 545 EMKVANAAKVREEXXXXXXXXXXXXXXXXXXXXXXXXANGEVQGDGSCCPVVDDAELALR 366
           + KV +A + RE                           G  + + +    VDD ELA +
Sbjct: 251 QEKVESAVRARELAVRKALEARKAADVARKALDLVANNEGGKENNDN----VDDIELAFQ 306

Query: 365 LHRAINSSPRIFRNMRSVKLENLVDPKEVKLNASSLSRQSDPEKRVLNGELK------VC 204
           LHRA+NSSPRI  N+  V    L           ++  + + E R+ N EL+        
Sbjct: 307 LHRAMNSSPRISSNLCLVNSSCL---------GVTMIGEGNGEMRIRNSELRNLGAFGKL 357

Query: 203 TGNIGKAASGRKSSESVSDIGPVKKSDHADCNIENPTKEEQASCSSKVAVSSENGNSTDS 24
            G + K+    +   + +D G ++     D N+    ++++ S  +K+  S  N  S +S
Sbjct: 358 DGFMSKSVDVGRRKSNGNDDGVIRPDAKKDRNV--GMQQQEQSFFNKLINSRGNDCSVNS 415

Query: 23  GSQS 12
             QS
Sbjct: 416 DFQS 419


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