BLASTX nr result
ID: Coptis24_contig00011881
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00011881 (615 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003545731.1| PREDICTED: topless-related protein 1-like is... 120 2e-25 ref|XP_003599718.1| WD repeat-containing protein, putative [Medi... 120 2e-25 ref|XP_003543688.1| PREDICTED: topless-related protein 1-like [G... 120 3e-25 ref|XP_003531727.1| PREDICTED: protein TOPLESS-like [Glycine max] 119 6e-25 ref|XP_003597933.1| WD repeat-containing protein, putative [Medi... 118 7e-25 >ref|XP_003545731.1| PREDICTED: topless-related protein 1-like isoform 1 [Glycine max] Length = 1136 Score = 120 bits (301), Expect = 2e-25 Identities = 57/92 (61%), Positives = 66/92 (71%) Frame = +1 Query: 1 IDAHIGSVNDLVFSHPNKQLCIVSCGDDKAIKVWDAVTGAKQYMNIMFEGHEAPVLSVCP 180 IDAH+G VNDL FSHPNKQLC+++CGDDK IKVWDA TGAKQY FEGHEAPV SVCP Sbjct: 460 IDAHVGGVNDLAFSHPNKQLCVITCGDDKTIKVWDAATGAKQY---TFEGHEAPVYSVCP 516 Query: 181 HYKENIEEKEESVDHILSNVLSQRVSGRLFSH 276 HYKENI+ I S L ++ L+ + Sbjct: 517 HYKENIQ-------FIFSTALDGKIKAWLYDN 541 >ref|XP_003599718.1| WD repeat-containing protein, putative [Medicago truncatula] gi|357468121|ref|XP_003604345.1| WD repeat-containing protein, putative [Medicago truncatula] gi|355488766|gb|AES69969.1| WD repeat-containing protein, putative [Medicago truncatula] gi|355505400|gb|AES86542.1| WD repeat-containing protein, putative [Medicago truncatula] Length = 1138 Score = 120 bits (301), Expect = 2e-25 Identities = 57/92 (61%), Positives = 67/92 (72%) Frame = +1 Query: 1 IDAHIGSVNDLVFSHPNKQLCIVSCGDDKAIKVWDAVTGAKQYMNIMFEGHEAPVLSVCP 180 IDAH+G VNDL FSHPNKQLC+++CGDDK IKVWDAV+GAKQY FEGHEAPV SVCP Sbjct: 459 IDAHVGGVNDLAFSHPNKQLCVITCGDDKTIKVWDAVSGAKQY---TFEGHEAPVYSVCP 515 Query: 181 HYKENIEEKEESVDHILSNVLSQRVSGRLFSH 276 HYKENI+ I S L ++ L+ + Sbjct: 516 HYKENIQ-------FIFSTALDGKIKAWLYDN 540 >ref|XP_003543688.1| PREDICTED: topless-related protein 1-like [Glycine max] Length = 1132 Score = 120 bits (300), Expect = 3e-25 Identities = 56/92 (60%), Positives = 66/92 (71%) Frame = +1 Query: 1 IDAHIGSVNDLVFSHPNKQLCIVSCGDDKAIKVWDAVTGAKQYMNIMFEGHEAPVLSVCP 180 IDAH+G VNDL FSHPNKQLC+++CGDDK IKVWDA TGAKQY FEGHEAPV S+CP Sbjct: 456 IDAHVGGVNDLAFSHPNKQLCVITCGDDKTIKVWDAATGAKQY---TFEGHEAPVYSICP 512 Query: 181 HYKENIEEKEESVDHILSNVLSQRVSGRLFSH 276 HYKENI+ I S L ++ L+ + Sbjct: 513 HYKENIQ-------FIFSTALDGKIKAWLYDN 537 >ref|XP_003531727.1| PREDICTED: protein TOPLESS-like [Glycine max] Length = 1133 Score = 119 bits (297), Expect = 6e-25 Identities = 56/92 (60%), Positives = 66/92 (71%) Frame = +1 Query: 1 IDAHIGSVNDLVFSHPNKQLCIVSCGDDKAIKVWDAVTGAKQYMNIMFEGHEAPVLSVCP 180 IDAH+G VNDL FSHPNKQLC+++CGDDK IKVWDA +GAKQY FEGHEAPV SVCP Sbjct: 458 IDAHVGGVNDLAFSHPNKQLCVITCGDDKTIKVWDAASGAKQY---TFEGHEAPVYSVCP 514 Query: 181 HYKENIEEKEESVDHILSNVLSQRVSGRLFSH 276 HYKENI+ I S L ++ L+ + Sbjct: 515 HYKENIQ-------FIFSTALDGKIKAWLYDN 539 >ref|XP_003597933.1| WD repeat-containing protein, putative [Medicago truncatula] gi|355486981|gb|AES68184.1| WD repeat-containing protein, putative [Medicago truncatula] Length = 1149 Score = 118 bits (296), Expect = 7e-25 Identities = 56/92 (60%), Positives = 65/92 (70%) Frame = +1 Query: 1 IDAHIGSVNDLVFSHPNKQLCIVSCGDDKAIKVWDAVTGAKQYMNIMFEGHEAPVLSVCP 180 IDAH+G VNDL FSHPNKQLC+++CGDDK IKVWDA TG KQY FEGHEAPV SVCP Sbjct: 474 IDAHVGGVNDLAFSHPNKQLCVITCGDDKTIKVWDAATGLKQY---TFEGHEAPVYSVCP 530 Query: 181 HYKENIEEKEESVDHILSNVLSQRVSGRLFSH 276 HYKENI+ I S L ++ L+ + Sbjct: 531 HYKENIQ-------FIFSTALDGKIKAWLYDN 555