BLASTX nr result

ID: Coptis24_contig00011881 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00011881
         (615 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003545731.1| PREDICTED: topless-related protein 1-like is...   120   2e-25
ref|XP_003599718.1| WD repeat-containing protein, putative [Medi...   120   2e-25
ref|XP_003543688.1| PREDICTED: topless-related protein 1-like [G...   120   3e-25
ref|XP_003531727.1| PREDICTED: protein TOPLESS-like [Glycine max]     119   6e-25
ref|XP_003597933.1| WD repeat-containing protein, putative [Medi...   118   7e-25

>ref|XP_003545731.1| PREDICTED: topless-related protein 1-like isoform 1 [Glycine max]
          Length = 1136

 Score =  120 bits (301), Expect = 2e-25
 Identities = 57/92 (61%), Positives = 66/92 (71%)
 Frame = +1

Query: 1   IDAHIGSVNDLVFSHPNKQLCIVSCGDDKAIKVWDAVTGAKQYMNIMFEGHEAPVLSVCP 180
           IDAH+G VNDL FSHPNKQLC+++CGDDK IKVWDA TGAKQY    FEGHEAPV SVCP
Sbjct: 460 IDAHVGGVNDLAFSHPNKQLCVITCGDDKTIKVWDAATGAKQY---TFEGHEAPVYSVCP 516

Query: 181 HYKENIEEKEESVDHILSNVLSQRVSGRLFSH 276
           HYKENI+        I S  L  ++   L+ +
Sbjct: 517 HYKENIQ-------FIFSTALDGKIKAWLYDN 541


>ref|XP_003599718.1| WD repeat-containing protein, putative [Medicago truncatula]
           gi|357468121|ref|XP_003604345.1| WD repeat-containing
           protein, putative [Medicago truncatula]
           gi|355488766|gb|AES69969.1| WD repeat-containing
           protein, putative [Medicago truncatula]
           gi|355505400|gb|AES86542.1| WD repeat-containing
           protein, putative [Medicago truncatula]
          Length = 1138

 Score =  120 bits (301), Expect = 2e-25
 Identities = 57/92 (61%), Positives = 67/92 (72%)
 Frame = +1

Query: 1   IDAHIGSVNDLVFSHPNKQLCIVSCGDDKAIKVWDAVTGAKQYMNIMFEGHEAPVLSVCP 180
           IDAH+G VNDL FSHPNKQLC+++CGDDK IKVWDAV+GAKQY    FEGHEAPV SVCP
Sbjct: 459 IDAHVGGVNDLAFSHPNKQLCVITCGDDKTIKVWDAVSGAKQY---TFEGHEAPVYSVCP 515

Query: 181 HYKENIEEKEESVDHILSNVLSQRVSGRLFSH 276
           HYKENI+        I S  L  ++   L+ +
Sbjct: 516 HYKENIQ-------FIFSTALDGKIKAWLYDN 540


>ref|XP_003543688.1| PREDICTED: topless-related protein 1-like [Glycine max]
          Length = 1132

 Score =  120 bits (300), Expect = 3e-25
 Identities = 56/92 (60%), Positives = 66/92 (71%)
 Frame = +1

Query: 1   IDAHIGSVNDLVFSHPNKQLCIVSCGDDKAIKVWDAVTGAKQYMNIMFEGHEAPVLSVCP 180
           IDAH+G VNDL FSHPNKQLC+++CGDDK IKVWDA TGAKQY    FEGHEAPV S+CP
Sbjct: 456 IDAHVGGVNDLAFSHPNKQLCVITCGDDKTIKVWDAATGAKQY---TFEGHEAPVYSICP 512

Query: 181 HYKENIEEKEESVDHILSNVLSQRVSGRLFSH 276
           HYKENI+        I S  L  ++   L+ +
Sbjct: 513 HYKENIQ-------FIFSTALDGKIKAWLYDN 537


>ref|XP_003531727.1| PREDICTED: protein TOPLESS-like [Glycine max]
          Length = 1133

 Score =  119 bits (297), Expect = 6e-25
 Identities = 56/92 (60%), Positives = 66/92 (71%)
 Frame = +1

Query: 1   IDAHIGSVNDLVFSHPNKQLCIVSCGDDKAIKVWDAVTGAKQYMNIMFEGHEAPVLSVCP 180
           IDAH+G VNDL FSHPNKQLC+++CGDDK IKVWDA +GAKQY    FEGHEAPV SVCP
Sbjct: 458 IDAHVGGVNDLAFSHPNKQLCVITCGDDKTIKVWDAASGAKQY---TFEGHEAPVYSVCP 514

Query: 181 HYKENIEEKEESVDHILSNVLSQRVSGRLFSH 276
           HYKENI+        I S  L  ++   L+ +
Sbjct: 515 HYKENIQ-------FIFSTALDGKIKAWLYDN 539


>ref|XP_003597933.1| WD repeat-containing protein, putative [Medicago truncatula]
           gi|355486981|gb|AES68184.1| WD repeat-containing
           protein, putative [Medicago truncatula]
          Length = 1149

 Score =  118 bits (296), Expect = 7e-25
 Identities = 56/92 (60%), Positives = 65/92 (70%)
 Frame = +1

Query: 1   IDAHIGSVNDLVFSHPNKQLCIVSCGDDKAIKVWDAVTGAKQYMNIMFEGHEAPVLSVCP 180
           IDAH+G VNDL FSHPNKQLC+++CGDDK IKVWDA TG KQY    FEGHEAPV SVCP
Sbjct: 474 IDAHVGGVNDLAFSHPNKQLCVITCGDDKTIKVWDAATGLKQY---TFEGHEAPVYSVCP 530

Query: 181 HYKENIEEKEESVDHILSNVLSQRVSGRLFSH 276
           HYKENI+        I S  L  ++   L+ +
Sbjct: 531 HYKENIQ-------FIFSTALDGKIKAWLYDN 555


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