BLASTX nr result

ID: Coptis24_contig00011870 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00011870
         (238 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003542404.1| PREDICTED: uncharacterized protein LOC100776...   115   5e-24
ref|XP_003550981.1| PREDICTED: uncharacterized protein LOC100809...   112   4e-23
ref|XP_002318925.1| predicted protein [Populus trichocarpa] gi|2...   112   4e-23
ref|XP_002276424.1| PREDICTED: uncharacterized protein LOC100251...   110   1e-22
ref|XP_002329995.1| predicted protein [Populus trichocarpa] gi|2...   110   1e-22

>ref|XP_003542404.1| PREDICTED: uncharacterized protein LOC100776940 [Glycine max]
          Length = 748

 Score =  115 bits (287), Expect = 5e-24
 Identities = 52/78 (66%), Positives = 62/78 (79%)
 Frame = -3

Query: 236 TPSMEERLQKEILKAHSFQVLFTPGSNSTFDVHGDSIENVDIDQCICSCKGWQINGLPCC 57
           TPS EE LQKE L AHS QVLF+ GS  TF+V G+S++ VDID   CSCKGWQ+ G+PCC
Sbjct: 591 TPSKEELLQKERLVAHSLQVLFSQGS--TFEVRGESVDIVDIDNWDCSCKGWQLTGVPCC 648

Query: 56  HAVAVLKCINRSPYDYCS 3
           HA+AV +C+ RSPYDYCS
Sbjct: 649 HAIAVFECVGRSPYDYCS 666


>ref|XP_003550981.1| PREDICTED: uncharacterized protein LOC100809446 [Glycine max]
          Length = 748

 Score =  112 bits (279), Expect = 4e-23
 Identities = 51/78 (65%), Positives = 61/78 (78%)
 Frame = -3

Query: 236 TPSMEERLQKEILKAHSFQVLFTPGSNSTFDVHGDSIENVDIDQCICSCKGWQINGLPCC 57
           TPS EE LQKE L A S QVLF+ GS  TF+V G+S++ VDID   CSCKGWQ+ G+PCC
Sbjct: 591 TPSKEELLQKETLVAPSLQVLFSQGS--TFEVRGESVDIVDIDNWDCSCKGWQLTGVPCC 648

Query: 56  HAVAVLKCINRSPYDYCS 3
           HA+AV +C+ RSPYDYCS
Sbjct: 649 HAIAVFECVGRSPYDYCS 666


>ref|XP_002318925.1| predicted protein [Populus trichocarpa] gi|222857301|gb|EEE94848.1|
           predicted protein [Populus trichocarpa]
          Length = 580

 Score =  112 bits (279), Expect = 4e-23
 Identities = 51/78 (65%), Positives = 62/78 (79%)
 Frame = -3

Query: 236 TPSMEERLQKEILKAHSFQVLFTPGSNSTFDVHGDSIENVDIDQCICSCKGWQINGLPCC 57
           TPS EE+L+KE LK HS QVL + GS   F+V G+S+E VDID+  CSCK WQ++GLPCC
Sbjct: 425 TPSAEEKLEKESLKVHSLQVLLSAGS--IFEVRGESVEVVDIDRWDCSCKDWQLSGLPCC 482

Query: 56  HAVAVLKCINRSPYDYCS 3
           HA+AV+ CI RSPYDYCS
Sbjct: 483 HALAVIGCIGRSPYDYCS 500


>ref|XP_002276424.1| PREDICTED: uncharacterized protein LOC100251030 [Vitis vinifera]
          Length = 768

 Score =  110 bits (275), Expect = 1e-22
 Identities = 49/78 (62%), Positives = 61/78 (78%)
 Frame = -3

Query: 236 TPSMEERLQKEILKAHSFQVLFTPGSNSTFDVHGDSIENVDIDQCICSCKGWQINGLPCC 57
           TPSMEE+L+KE +K    QVL + G+  TF+V GD+IE VDID   CSCKGWQ+ GLPCC
Sbjct: 610 TPSMEEKLEKETVKVRPLQVLLSGGN--TFEVRGDTIEVVDIDHWDCSCKGWQLTGLPCC 667

Query: 56  HAVAVLKCINRSPYDYCS 3
           HA+AV+ CI +SPY+YCS
Sbjct: 668 HAIAVISCIGQSPYEYCS 685


>ref|XP_002329995.1| predicted protein [Populus trichocarpa] gi|222871420|gb|EEF08551.1|
           predicted protein [Populus trichocarpa]
          Length = 580

 Score =  110 bits (275), Expect = 1e-22
 Identities = 50/78 (64%), Positives = 60/78 (76%)
 Frame = -3

Query: 236 TPSMEERLQKEILKAHSFQVLFTPGSNSTFDVHGDSIENVDIDQCICSCKGWQINGLPCC 57
           TPS EE+L+KE LK HS QVL + GS  TF+V G+S+E VDID+  CSCK WQ+ G PCC
Sbjct: 425 TPSSEEKLEKETLKVHSLQVLLSAGS--TFEVRGESVEVVDIDRWDCSCKEWQLTGFPCC 482

Query: 56  HAVAVLKCINRSPYDYCS 3
           HA+AV+ CI R PYDYCS
Sbjct: 483 HALAVIGCIGRCPYDYCS 500


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