BLASTX nr result

ID: Coptis24_contig00011842 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00011842
         (654 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284205.1| PREDICTED: rac-like GTP-binding protein ARAC...   259   4e-67
ref|XP_002514274.1| rac gtpase, putative [Ricinus communis] gi|2...   258   5e-67
ref|XP_003528925.1| PREDICTED: rac-like GTP-binding protein ARAC...   257   1e-66
gb|AFK42778.1| unknown [Lotus japonicus]                              256   2e-66
ref|XP_003620632.1| Rac-like GTP-binding protein [Medicago trunc...   256   3e-66

>ref|XP_002284205.1| PREDICTED: rac-like GTP-binding protein ARAC7 isoform 1 [Vitis
           vinifera] gi|147781539|emb|CAN73708.1| hypothetical
           protein VITISV_023715 [Vitis vinifera]
           gi|297738799|emb|CBI28044.3| unnamed protein product
           [Vitis vinifera]
          Length = 210

 Score =  259 bits (661), Expect = 4e-67
 Identities = 127/149 (85%), Positives = 136/149 (91%)
 Frame = -3

Query: 652 WDTAGQEDYSRLRPLSYRGADVFVLAFSLLSRPSYENVMKKWMPELRRFAPNVPIVLVGT 473
           WDTAGQEDYSRLRPLSYRGAD+FVLAFSL+SR SYENV+KKWMPELRRFAPNVPIVLVGT
Sbjct: 59  WDTAGQEDYSRLRPLSYRGADIFVLAFSLISRASYENVLKKWMPELRRFAPNVPIVLVGT 118

Query: 472 KLDLRDGKGYLNDHTSSGVITSAQGEELRKQIGAAAYIECSSKTQQNVKAVFDNAIKVVL 293
           KLDLR+ KGYL DH  S VITSAQGEELRKQIGAAAYIECSSKTQQNVKAVFD AIKVVL
Sbjct: 119 KLDLREDKGYLADHMGSNVITSAQGEELRKQIGAAAYIECSSKTQQNVKAVFDTAIKVVL 178

Query: 292 QPPRRKEIAMKKRQRRSSHSCLRIMCGGC 206
           QPPRRKE+A KKR+R +  S + I+CGGC
Sbjct: 179 QPPRRKEVARKKRRRSTGCSIVSIVCGGC 207


>ref|XP_002514274.1| rac gtpase, putative [Ricinus communis] gi|223546730|gb|EEF48228.1|
           rac gtpase, putative [Ricinus communis]
          Length = 209

 Score =  258 bits (660), Expect = 5e-67
 Identities = 126/150 (84%), Positives = 137/150 (91%)
 Frame = -3

Query: 652 WDTAGQEDYSRLRPLSYRGADVFVLAFSLLSRPSYENVMKKWMPELRRFAPNVPIVLVGT 473
           WDTAGQEDYSRLRPLSYRGAD+FVLAFSL+SR SYENV+KKWMPELRRFAPNVPIVLVGT
Sbjct: 59  WDTAGQEDYSRLRPLSYRGADIFVLAFSLISRASYENVLKKWMPELRRFAPNVPIVLVGT 118

Query: 472 KLDLRDGKGYLNDHTSSGVITSAQGEELRKQIGAAAYIECSSKTQQNVKAVFDNAIKVVL 293
           KLDLRD +GYL DH +  VITSAQGEELRKQIGAAAYIECSSKTQQNVKAVFD AIKVVL
Sbjct: 119 KLDLRDDRGYLADHMNFNVITSAQGEELRKQIGAAAYIECSSKTQQNVKAVFDTAIKVVL 178

Query: 292 QPPRRKEIAMKKRQRRSSHSCLRIMCGGCV 203
           QPPR+KE+A KK++R S  + + IMCGGCV
Sbjct: 179 QPPRKKEMARKKKRRSSGRAIVSIMCGGCV 208


>ref|XP_003528925.1| PREDICTED: rac-like GTP-binding protein ARAC7-like [Glycine max]
          Length = 210

 Score =  257 bits (657), Expect = 1e-66
 Identities = 126/149 (84%), Positives = 135/149 (90%)
 Frame = -3

Query: 652 WDTAGQEDYSRLRPLSYRGADVFVLAFSLLSRPSYENVMKKWMPELRRFAPNVPIVLVGT 473
           WDTAGQEDYSRLRPLSYRGAD+FVLAFSL+SR SYENV+KKWMPELRRFAPNVPIVLVGT
Sbjct: 60  WDTAGQEDYSRLRPLSYRGADIFVLAFSLISRASYENVLKKWMPELRRFAPNVPIVLVGT 119

Query: 472 KLDLRDGKGYLNDHTSSGVITSAQGEELRKQIGAAAYIECSSKTQQNVKAVFDNAIKVVL 293
           KLDLR+ +GY+ DH  S VITSA+GEELRKQIGA AYIECSSKTQQNVKAVFD AIKVVL
Sbjct: 120 KLDLREDRGYVADHMGSSVITSAEGEELRKQIGAVAYIECSSKTQQNVKAVFDTAIKVVL 179

Query: 292 QPPRRKEIAMKKRQRRSSHSCLRIMCGGC 206
           QPPRRKE+A KKR RRS  S + IMCGGC
Sbjct: 180 QPPRRKEMARKKRHRRSGCSFVSIMCGGC 208


>gb|AFK42778.1| unknown [Lotus japonicus]
          Length = 210

 Score =  256 bits (655), Expect = 2e-66
 Identities = 126/149 (84%), Positives = 135/149 (90%)
 Frame = -3

Query: 652 WDTAGQEDYSRLRPLSYRGADVFVLAFSLLSRPSYENVMKKWMPELRRFAPNVPIVLVGT 473
           WDTAGQEDYSRLRPLSYRGAD+FVLAFSL+SR SYENV+KKWMPELRRFAPNVPIVLVGT
Sbjct: 60  WDTAGQEDYSRLRPLSYRGADIFVLAFSLISRASYENVLKKWMPELRRFAPNVPIVLVGT 119

Query: 472 KLDLRDGKGYLNDHTSSGVITSAQGEELRKQIGAAAYIECSSKTQQNVKAVFDNAIKVVL 293
           KLDLR+ +GY  DH  S VITSA+GEELRKQIGAAAYIECSSKTQQNVKAVFD AIKVVL
Sbjct: 120 KLDLREDRGYFADHMGSNVITSAEGEELRKQIGAAAYIECSSKTQQNVKAVFDTAIKVVL 179

Query: 292 QPPRRKEIAMKKRQRRSSHSCLRIMCGGC 206
           QPPRRKE+A KKR RRS  S + I+CGGC
Sbjct: 180 QPPRRKEMASKKRHRRSGCSFVGIVCGGC 208


>ref|XP_003620632.1| Rac-like GTP-binding protein [Medicago truncatula]
           gi|145700967|gb|ABH04325.2| ROP-like protein [Medicago
           truncatula] gi|355495647|gb|AES76850.1| Rac-like
           GTP-binding protein [Medicago truncatula]
          Length = 209

 Score =  256 bits (653), Expect = 3e-66
 Identities = 126/149 (84%), Positives = 134/149 (89%)
 Frame = -3

Query: 652 WDTAGQEDYSRLRPLSYRGADVFVLAFSLLSRPSYENVMKKWMPELRRFAPNVPIVLVGT 473
           WDTAGQEDYSRLRPLSYRGAD+FVLAFSL+SR SYENV+KKWMPELRRFAPNVPIVLVGT
Sbjct: 59  WDTAGQEDYSRLRPLSYRGADIFVLAFSLISRASYENVLKKWMPELRRFAPNVPIVLVGT 118

Query: 472 KLDLRDGKGYLNDHTSSGVITSAQGEELRKQIGAAAYIECSSKTQQNVKAVFDNAIKVVL 293
           KLDLR+ +GY  DHT   VITSA+GEELRKQIGAAAYIECSSKTQQNVKAVFD AIKVVL
Sbjct: 119 KLDLREDRGYFADHTGYNVITSAEGEELRKQIGAAAYIECSSKTQQNVKAVFDTAIKVVL 178

Query: 292 QPPRRKEIAMKKRQRRSSHSCLRIMCGGC 206
           QPPRRKE+  KKRQRRS  S   I+CGGC
Sbjct: 179 QPPRRKEMPRKKRQRRSGCSFAGIVCGGC 207


Top