BLASTX nr result

ID: Coptis24_contig00011839 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00011839
         (823 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001142956.1| uncharacterized protein LOC100275407 [Zea ma...   149   1e-33
dbj|BAJ94605.1| predicted protein [Hordeum vulgare subsp. vulgare]    145   8e-33
gb|ACG47290.1| hypothetical protein [Zea mays]                        145   8e-33
ref|XP_002466498.1| hypothetical protein SORBIDRAFT_01g008810 [S...   144   2e-32
ref|NP_001130861.1| uncharacterized protein LOC100191965 [Zea ma...   143   4e-32

>ref|NP_001142956.1| uncharacterized protein LOC100275407 [Zea mays]
           gi|195608620|gb|ACG26140.1| hypothetical protein [Zea
           mays] gi|195612036|gb|ACG27848.1| hypothetical protein
           [Zea mays] gi|413933143|gb|AFW67694.1| hypothetical
           protein ZEAMMB73_067092 [Zea mays]
          Length = 240

 Score =  149 bits (375), Expect = 1e-33
 Identities = 71/147 (48%), Positives = 98/147 (66%), Gaps = 4/147 (2%)
 Frame = -1

Query: 538 VSVENLDEWIRDSVSEIVRNIGEAPFLMQVYSK---TKVEVEREKENVDVWASVKRRWKE 368
           V  E ++ W+RDS++EIVR++GEAPFL+ ++S     +V V RE    + W  V+RRW  
Sbjct: 88  VGEEKVERWMRDSIAEIVRHVGEAPFLVHLFSSGEGERVTVRREPAAPESWPDVRRRWGP 147

Query: 367 G-CPIPDGVILVEQLNGDDDGNKRMEDLTGRTREWGVLIQGRGIDCPSCYILKTCRVLSS 191
           G    PDG+ILVEQ+  D  G     +   +   WG+++Q RG++  SCY+L TCRV SS
Sbjct: 148 GGARRPDGIILVEQVASDGGGASAASEAARQV--WGLVVQARGMERASCYVLSTCRVRSS 205

Query: 190 IGFCTHFCLVRAKCFGETAELQLQNSW 110
            GFCTHFCL RA+CFG+  ELQL+N+W
Sbjct: 206 AGFCTHFCLARAQCFGDPVELQLRNAW 232


>dbj|BAJ94605.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 240

 Score =  145 bits (367), Expect = 8e-33
 Identities = 71/147 (48%), Positives = 100/147 (68%), Gaps = 4/147 (2%)
 Frame = -1

Query: 538 VSVENLDEWIRDSVSEIVRNIGEAPFLMQVYSKTK--VEVEREKENVDVWASVKRRWKEG 365
           V  E ++ W+R+S++EIVR++GEAPFL+ ++S  +  V V RE  + + W  V+RRW  G
Sbjct: 90  VGEERVEGWMRESIAEIVRHVGEAPFLVHLFSDGREGVTVRRETASAEAWPDVRRRWGPG 149

Query: 364 CPI-PDGVILVEQLNGDDDGNKRMEDLTGRTRE-WGVLIQGRGIDCPSCYILKTCRVLSS 191
               PDG+ILVEQ+         +ED     R+ WG+++Q RG++C +CY+L TCRV S 
Sbjct: 150 GQRRPDGIILVEQVAA-----AAVEDGAEAARQVWGLVVQARGMECAACYVLDTCRVRSP 204

Query: 190 IGFCTHFCLVRAKCFGETAELQLQNSW 110
            GFCTHFCL RA+CFGE  ELQL+N+W
Sbjct: 205 AGFCTHFCLARAQCFGEPLELQLRNAW 231


>gb|ACG47290.1| hypothetical protein [Zea mays]
          Length = 238

 Score =  145 bits (367), Expect = 8e-33
 Identities = 79/165 (47%), Positives = 104/165 (63%), Gaps = 7/165 (4%)
 Frame = -1

Query: 583 FGKEKEXXXXXXXXNVSVENLDEWIRDSVSEIVRNIGEAPFLMQVYSK-----TKVEVER 419
           FG+E++         V  E +D WIR+S++EIVR+IGEAPFL+ ++S        V V R
Sbjct: 72  FGREEDEVLEK----VGEEKVDGWIRESIAEIVRHIGEAPFLVHLFSSGDGDGEHVTVRR 127

Query: 418 EKENVDVWASVKRRWKEGCPI-PDGVILVEQLNGDD-DGNKRMEDLTGRTREWGVLIQGR 245
           E    + W  V+RRW  G    PDGVILVEQ+     DG     +   +   WG+++Q R
Sbjct: 128 ETAAPESWPDVRRRWGMGGQRRPDGVILVEQVAAVAVDGGASASEAARQV--WGLVVQAR 185

Query: 244 GIDCPSCYILKTCRVLSSIGFCTHFCLVRAKCFGETAELQLQNSW 110
           G++  SCY+L TCRVLSS GFCTHFCL RAKCFG+  ELQL+N+W
Sbjct: 186 GMEHASCYVLDTCRVLSSAGFCTHFCLARAKCFGDPVELQLRNAW 230


>ref|XP_002466498.1| hypothetical protein SORBIDRAFT_01g008810 [Sorghum bicolor]
           gi|241920352|gb|EER93496.1| hypothetical protein
           SORBIDRAFT_01g008810 [Sorghum bicolor]
          Length = 237

 Score =  144 bits (364), Expect = 2e-32
 Identities = 70/149 (46%), Positives = 97/149 (65%), Gaps = 6/149 (4%)
 Frame = -1

Query: 538 VSVENLDEWIRDSVSEIVRNIGEAPFLMQVYSKT-----KVEVEREKENVDVWASVKRRW 374
           V  E ++ W+R+S++EIVR+IGEAPFL+ ++S       +V V RE    + WA V+RRW
Sbjct: 85  VGEEKVEGWMRESIAEIVRHIGEAPFLVHLFSNDDGEGERVTVRREPAAPESWADVRRRW 144

Query: 373 KEGCPI-PDGVILVEQLNGDDDGNKRMEDLTGRTREWGVLIQGRGIDCPSCYILKTCRVL 197
             G    PDG+ILVEQ+  D   +          + WG+++Q RG++C SCY+L TCRV 
Sbjct: 145 GPGGQRKPDGIILVEQVAADGGASAS----EAARQVWGLVVQARGMECASCYVLDTCRVR 200

Query: 196 SSIGFCTHFCLVRAKCFGETAELQLQNSW 110
           S  GFCTHFCL R +CFG+  ELQL+N+W
Sbjct: 201 SPAGFCTHFCLARVQCFGDPVELQLRNAW 229


>ref|NP_001130861.1| uncharacterized protein LOC100191965 [Zea mays]
           gi|194690292|gb|ACF79230.1| unknown [Zea mays]
           gi|414872650|tpg|DAA51207.1| TPA: hypothetical protein
           ZEAMMB73_570530 [Zea mays]
          Length = 238

 Score =  143 bits (361), Expect = 4e-32
 Identities = 78/165 (47%), Positives = 103/165 (62%), Gaps = 7/165 (4%)
 Frame = -1

Query: 583 FGKEKEXXXXXXXXNVSVENLDEWIRDSVSEIVRNIGEAPFLMQVYSK-----TKVEVER 419
           FG+E++         V  E +D WIR+S++EIVR+IGEAPFL+ ++S        V V R
Sbjct: 72  FGREEDEVLEK----VGEEKVDGWIRESIAEIVRHIGEAPFLVHLFSSGDGDGEHVTVRR 127

Query: 418 EKENVDVWASVKRRWKEGCPI-PDGVILVEQLNGDD-DGNKRMEDLTGRTREWGVLIQGR 245
           E    + W  V+RRW  G    PDGVILVEQ+     DG     +   +   WG+++Q R
Sbjct: 128 ETAAPESWPDVRRRWGMGGQRRPDGVILVEQVAAVAVDGGASASEAARQV--WGLVVQAR 185

Query: 244 GIDCPSCYILKTCRVLSSIGFCTHFCLVRAKCFGETAELQLQNSW 110
           G++  SCY+L TCRV SS GFCTHFCL RAKCFG+  ELQL+N+W
Sbjct: 186 GMEHASCYVLDTCRVRSSAGFCTHFCLARAKCFGDPVELQLRNAW 230


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