BLASTX nr result

ID: Coptis24_contig00011830 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00011830
         (638 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265460.1| PREDICTED: protein IQ-DOMAIN 14-like [Vitis ...   124   1e-26
emb|CAN66770.1| hypothetical protein VITISV_013810 [Vitis vinifera]   124   1e-26
ref|XP_002517079.1| calmodulin binding protein, putative [Ricinu...   123   3e-26
ref|XP_002312547.1| predicted protein [Populus trichocarpa] gi|2...   121   1e-25
ref|XP_002314666.1| predicted protein [Populus trichocarpa] gi|2...   118   1e-24

>ref|XP_002265460.1| PREDICTED: protein IQ-DOMAIN 14-like [Vitis vinifera]
          Length = 464

 Score =  124 bits (311), Expect = 1e-26
 Identities = 76/176 (43%), Positives = 98/176 (55%), Gaps = 1/176 (0%)
 Frame = -3

Query: 621 AFVSSCNDAVMAVGQPAPAVTQLXXXXXXXXXXXXXXXXXXXXXXXRGYLARKALCALKG 442
           A  ++   A +A  Q A AV +L                       R +LARKALCALKG
Sbjct: 101 AATAAAAGAAVAAAQAAAAVIRLTAAATGRAGAIEEAAAVKIQAAFRAHLARKALCALKG 160

Query: 441 LVKLQALVRGYLVRKQAARTLRCMQSLVIVXXXXXXXXXQMAEETHLLAQRSSNYRNLLQ 262
           LVKLQALVRG LVRKQA  TLRCMQ+LV V         +M EET  + QR    R   Q
Sbjct: 161 LVKLQALVRGNLVRKQATATLRCMQALVTVQARARVQRIRMTEETKPVNQRQLTQRKSTQ 220

Query: 261 ANHIRPT-YNMDRHIEDNVKVVEMDFGQSRGSTKSMNGYLTNDHVERVDQRYSPHH 97
            N  R T ++ DR +E+N+K+VEMD G+S+GS+K  N Y  +   ER + R+S ++
Sbjct: 221 DNRFRNTNHDKDRGMEENIKIVEMDQGESKGSSKGRNSYSNHAQTERAEPRFSTNY 276


>emb|CAN66770.1| hypothetical protein VITISV_013810 [Vitis vinifera]
          Length = 570

 Score =  124 bits (311), Expect = 1e-26
 Identities = 76/176 (43%), Positives = 98/176 (55%), Gaps = 1/176 (0%)
 Frame = -3

Query: 621 AFVSSCNDAVMAVGQPAPAVTQLXXXXXXXXXXXXXXXXXXXXXXXRGYLARKALCALKG 442
           A  ++   A +A  Q A AV +L                       R +LARKALCALKG
Sbjct: 101 AATAAAAGAAVAAAQAAAAVIRLTAAATGRAGAIEEAAAVKIQAAFRAHLARKALCALKG 160

Query: 441 LVKLQALVRGYLVRKQAARTLRCMQSLVIVXXXXXXXXXQMAEETHLLAQRSSNYRNLLQ 262
           LVKLQALVRG LVRKQA  TLRCMQ+LV V         +M EET  + QR    R   Q
Sbjct: 161 LVKLQALVRGNLVRKQATATLRCMQALVTVQARARVQRIRMTEETKPVNQRQLTQRKSTQ 220

Query: 261 ANHIRPT-YNMDRHIEDNVKVVEMDFGQSRGSTKSMNGYLTNDHVERVDQRYSPHH 97
            N  R T ++ DR +E+N+K+VEMD G+S+GS+K  N Y  +   ER + R+S ++
Sbjct: 221 DNRFRNTNHDKDRGMEENIKIVEMDQGESKGSSKGRNSYSNHAQTERAEPRFSTNY 276


>ref|XP_002517079.1| calmodulin binding protein, putative [Ricinus communis]
           gi|223543714|gb|EEF45242.1| calmodulin binding protein,
           putative [Ricinus communis]
          Length = 455

 Score =  123 bits (309), Expect = 3e-26
 Identities = 75/167 (44%), Positives = 93/167 (55%), Gaps = 2/167 (1%)
 Frame = -3

Query: 600 DAVMAVGQPAPAVTQLXXXXXXXXXXXXXXXXXXXXXXXRGYLARKALCALKGLVKLQAL 421
           DA +A  Q A  V +L                       R YLARKALCALKGLVKLQAL
Sbjct: 105 DAAVAAAQAAAVVIRLTAAAKKRNSAIEEVAAIKIQAFFRSYLARKALCALKGLVKLQAL 164

Query: 420 VRGYLVRKQAARTLRCMQSLVIVXXXXXXXXXQMAEETHLLAQRSSNYRNLLQANHIR-P 244
           VRG+LVRKQA  TLRCMQ+LV           +MAE+ +   Q+ S +R   Q N  R  
Sbjct: 165 VRGHLVRKQATTTLRCMQALVTAQARARAQRIRMAEDGNPATQKQSIHRRSTQDNRFRHS 224

Query: 243 TYNMDRHIEDNVKVVEMDFGQSRGSTKSMNGYLTNDHVE-RVDQRYS 106
            Y++D  +E+N+K+VEMD GQS+G TKS N Y  N   E R+   Y+
Sbjct: 225 NYDIDGGMEENIKIVEMDLGQSKGITKSRNSYSNNPQTEHRISTHYA 271


>ref|XP_002312547.1| predicted protein [Populus trichocarpa] gi|222852367|gb|EEE89914.1|
           predicted protein [Populus trichocarpa]
          Length = 435

 Score =  121 bits (304), Expect = 1e-25
 Identities = 77/175 (44%), Positives = 101/175 (57%), Gaps = 2/175 (1%)
 Frame = -3

Query: 615 VSSCNDAVMAVGQPAPAVTQLXXXXXXXXXXXXXXXXXXXXXXXRGYLARKALCALKGLV 436
           +++  DA MA  Q A AV +L                       R YLARKALCALKGLV
Sbjct: 74  MAAAADAAMAAAQAAAAVIRLTTATSRRNSTIEEDAAVKIQSVFRSYLARKALCALKGLV 133

Query: 435 KLQALVRGYLVRKQAARTLRCMQSLVIVXXXXXXXXXQMAEETHLLAQRSSNYRNLLQAN 256
           KLQALVRG+LVRKQA  TLRCMQ+LV V          MAE+    +QR+S +R   Q N
Sbjct: 134 KLQALVRGHLVRKQATATLRCMQALVNVQTRARAQRIWMAEDVK-PSQRNSIHRKSTQEN 192

Query: 255 HIRPTYN-MDRHI-EDNVKVVEMDFGQSRGSTKSMNGYLTNDHVERVDQRYSPHH 97
            IR T +  DR + ++N+K+VE+D G+S+GS KS NG+      +  + R+S H+
Sbjct: 193 RIRHTNDENDRGMDQENIKIVEVDVGESKGSIKSRNGFSHRPQTDLTEHRFSTHY 247


>ref|XP_002314666.1| predicted protein [Populus trichocarpa] gi|222863706|gb|EEF00837.1|
           predicted protein [Populus trichocarpa]
          Length = 430

 Score =  118 bits (295), Expect = 1e-24
 Identities = 67/127 (52%), Positives = 85/127 (66%), Gaps = 1/127 (0%)
 Frame = -3

Query: 477 YLARKALCALKGLVKLQALVRGYLVRKQAARTLRCMQSLVIVXXXXXXXXXQMAEETHLL 298
           YLARKAL ALKGLVKLQALVRG+LVRKQA  TLRCMQ+LV V          M E+ +  
Sbjct: 116 YLARKALRALKGLVKLQALVRGHLVRKQATATLRCMQALVNVQTRARAQRIWMNEDVN-P 174

Query: 297 AQRSSNYRNLLQANHIRPT-YNMDRHIEDNVKVVEMDFGQSRGSTKSMNGYLTNDHVERV 121
           +QR S +R   Q N IR T Y  +R +++N+K+VEMD G+S+GS KS N Y  +   +R 
Sbjct: 175 SQRQSIHRKSTQENRIRHTNYENERVMDENIKIVEMDVGESKGSIKSRNSYSHHPQTDRA 234

Query: 120 DQRYSPH 100
           + R+S H
Sbjct: 235 EHRFSTH 241


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