BLASTX nr result

ID: Coptis24_contig00011824 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00011824
         (273 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002314045.1| predicted protein [Populus trichocarpa] gi|2...    79   5e-13
ref|XP_002517807.1| conserved hypothetical protein [Ricinus comm...    74   9e-12
gb|EAY89056.1| hypothetical protein OsI_10540 [Oryza sativa Indi...    71   8e-11
ref|NP_001173314.1| Os03g0217000 [Oryza sativa Japonica Group] g...    71   8e-11
gb|AFW89184.1| hypothetical protein ZEAMMB73_915464 [Zea mays]         70   2e-10

>ref|XP_002314045.1| predicted protein [Populus trichocarpa] gi|222850453|gb|EEE88000.1|
           predicted protein [Populus trichocarpa]
          Length = 118

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 34/43 (79%), Positives = 41/43 (95%)
 Frame = -1

Query: 273 SMSPKTKGDWKDVLLMSISFAVYVYMSQKIVTAYCSWISILKQ 145
           ++SPK KGDWKDV+LMS+SFAVYVYMSQKIV AYC+W+S+LKQ
Sbjct: 75  NLSPKRKGDWKDVMLMSLSFAVYVYMSQKIVCAYCAWMSMLKQ 117


>ref|XP_002517807.1| conserved hypothetical protein [Ricinus communis]
           gi|223543079|gb|EEF44614.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 120

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 32/43 (74%), Positives = 40/43 (93%)
 Frame = -1

Query: 273 SMSPKTKGDWKDVLLMSISFAVYVYMSQKIVTAYCSWISILKQ 145
           ++SPK KGDWKDV+LMS+SFAVYVY+SQ+IV AYC+W S+LKQ
Sbjct: 76  NLSPKQKGDWKDVVLMSLSFAVYVYISQQIVCAYCAWTSMLKQ 118


>gb|EAY89056.1| hypothetical protein OsI_10540 [Oryza sativa Indica Group]
          Length = 143

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 31/41 (75%), Positives = 36/41 (87%)
 Frame = -1

Query: 273 SMSPKTKGDWKDVLLMSISFAVYVYMSQKIVTAYCSWISIL 151
           S+SPK KGDWKDV LMS SFAVYVY+SQKIV  YC+WIS++
Sbjct: 101 SLSPKQKGDWKDVTLMSFSFAVYVYISQKIVCTYCAWISMI 141


>ref|NP_001173314.1| Os03g0217000 [Oryza sativa Japonica Group]
           gi|108706860|gb|ABF94655.1| expressed protein [Oryza
           sativa Japonica Group] gi|125585410|gb|EAZ26074.1|
           hypothetical protein OsJ_09928 [Oryza sativa Japonica
           Group] gi|255674313|dbj|BAH92042.1| Os03g0217000 [Oryza
           sativa Japonica Group]
          Length = 143

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 31/41 (75%), Positives = 36/41 (87%)
 Frame = -1

Query: 273 SMSPKTKGDWKDVLLMSISFAVYVYMSQKIVTAYCSWISIL 151
           S+SPK KGDWKDV LMS SFAVYVY+SQKIV  YC+WIS++
Sbjct: 101 SLSPKQKGDWKDVTLMSFSFAVYVYISQKIVCTYCAWISMI 141


>gb|AFW89184.1| hypothetical protein ZEAMMB73_915464 [Zea mays]
          Length = 177

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 29/41 (70%), Positives = 36/41 (87%)
 Frame = -1

Query: 273 SMSPKTKGDWKDVLLMSISFAVYVYMSQKIVTAYCSWISIL 151
           S+SPK KGDWKDV LMS SFAVYVY+SQK+V  YC+W+S++
Sbjct: 135 SLSPKQKGDWKDVTLMSFSFAVYVYISQKLVCTYCAWLSMI 175


Top