BLASTX nr result
ID: Coptis24_contig00011824
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00011824 (273 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002314045.1| predicted protein [Populus trichocarpa] gi|2... 79 5e-13 ref|XP_002517807.1| conserved hypothetical protein [Ricinus comm... 74 9e-12 gb|EAY89056.1| hypothetical protein OsI_10540 [Oryza sativa Indi... 71 8e-11 ref|NP_001173314.1| Os03g0217000 [Oryza sativa Japonica Group] g... 71 8e-11 gb|AFW89184.1| hypothetical protein ZEAMMB73_915464 [Zea mays] 70 2e-10 >ref|XP_002314045.1| predicted protein [Populus trichocarpa] gi|222850453|gb|EEE88000.1| predicted protein [Populus trichocarpa] Length = 118 Score = 78.6 bits (192), Expect = 5e-13 Identities = 34/43 (79%), Positives = 41/43 (95%) Frame = -1 Query: 273 SMSPKTKGDWKDVLLMSISFAVYVYMSQKIVTAYCSWISILKQ 145 ++SPK KGDWKDV+LMS+SFAVYVYMSQKIV AYC+W+S+LKQ Sbjct: 75 NLSPKRKGDWKDVMLMSLSFAVYVYMSQKIVCAYCAWMSMLKQ 117 >ref|XP_002517807.1| conserved hypothetical protein [Ricinus communis] gi|223543079|gb|EEF44614.1| conserved hypothetical protein [Ricinus communis] Length = 120 Score = 74.3 bits (181), Expect = 9e-12 Identities = 32/43 (74%), Positives = 40/43 (93%) Frame = -1 Query: 273 SMSPKTKGDWKDVLLMSISFAVYVYMSQKIVTAYCSWISILKQ 145 ++SPK KGDWKDV+LMS+SFAVYVY+SQ+IV AYC+W S+LKQ Sbjct: 76 NLSPKQKGDWKDVVLMSLSFAVYVYISQQIVCAYCAWTSMLKQ 118 >gb|EAY89056.1| hypothetical protein OsI_10540 [Oryza sativa Indica Group] Length = 143 Score = 71.2 bits (173), Expect = 8e-11 Identities = 31/41 (75%), Positives = 36/41 (87%) Frame = -1 Query: 273 SMSPKTKGDWKDVLLMSISFAVYVYMSQKIVTAYCSWISIL 151 S+SPK KGDWKDV LMS SFAVYVY+SQKIV YC+WIS++ Sbjct: 101 SLSPKQKGDWKDVTLMSFSFAVYVYISQKIVCTYCAWISMI 141 >ref|NP_001173314.1| Os03g0217000 [Oryza sativa Japonica Group] gi|108706860|gb|ABF94655.1| expressed protein [Oryza sativa Japonica Group] gi|125585410|gb|EAZ26074.1| hypothetical protein OsJ_09928 [Oryza sativa Japonica Group] gi|255674313|dbj|BAH92042.1| Os03g0217000 [Oryza sativa Japonica Group] Length = 143 Score = 71.2 bits (173), Expect = 8e-11 Identities = 31/41 (75%), Positives = 36/41 (87%) Frame = -1 Query: 273 SMSPKTKGDWKDVLLMSISFAVYVYMSQKIVTAYCSWISIL 151 S+SPK KGDWKDV LMS SFAVYVY+SQKIV YC+WIS++ Sbjct: 101 SLSPKQKGDWKDVTLMSFSFAVYVYISQKIVCTYCAWISMI 141 >gb|AFW89184.1| hypothetical protein ZEAMMB73_915464 [Zea mays] Length = 177 Score = 69.7 bits (169), Expect = 2e-10 Identities = 29/41 (70%), Positives = 36/41 (87%) Frame = -1 Query: 273 SMSPKTKGDWKDVLLMSISFAVYVYMSQKIVTAYCSWISIL 151 S+SPK KGDWKDV LMS SFAVYVY+SQK+V YC+W+S++ Sbjct: 135 SLSPKQKGDWKDVTLMSFSFAVYVYISQKLVCTYCAWLSMI 175