BLASTX nr result

ID: Coptis24_contig00011806 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00011806
         (1785 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002321160.1| predicted protein [Populus trichocarpa] gi|2...   365   2e-98
ref|XP_002528945.1| hypothetical protein RCOM_0510880 [Ricinus c...   347   8e-93
emb|CAN65424.1| hypothetical protein VITISV_024591 [Vitis vinifera]   341   4e-91
ref|XP_004144525.1| PREDICTED: uncharacterized protein LOC101208...   325   3e-86
emb|CBI28776.3| unnamed protein product [Vitis vinifera]              320   8e-85

>ref|XP_002321160.1| predicted protein [Populus trichocarpa] gi|222861933|gb|EEE99475.1|
            predicted protein [Populus trichocarpa]
          Length = 401

 Score =  365 bits (937), Expect = 2e-98
 Identities = 206/397 (51%), Positives = 268/397 (67%), Gaps = 22/397 (5%)
 Frame = +2

Query: 413  VKSVFSKNRSVGSHDAYVR-SYGLNKRRWSSVRSYLCGDEYNSVLADADSTSIRSSEDTI 589
            V+SVFS+NRS G+H++  R + G +++RWSSVR YLCG+E NSVLA+ DS S++SSE T+
Sbjct: 8    VRSVFSRNRSDGTHESNARITPGDHRKRWSSVRLYLCGEELNSVLAEEDSASVKSSEATV 67

Query: 590  TQHVAQEDLNSEDVQGEAKEQQITKEEHSSPAIQSNEENAATVIQSAFRRFLAR------ 751
            TQ + ++  +  DVQ E   + I KE+H+S +    +E+AA +IQSAFR FL R      
Sbjct: 68   TQPMLEDTEDKGDVQNEETREDIPKEKHNSTSKLFRQEDAAIIIQSAFRDFLVRSDRLKY 127

Query: 752  --------------RKDDVVKQIGQKETVQGLGSPSRESVGTSVEVQTAGSVEMLTLQEE 889
                          R++   K+ GQ E   G  SPSR+S+GTS+EVQT  SVE+L+++EE
Sbjct: 128  HNLDYCRKMKARHKREETNSKEDGQ-ELALGTESPSRDSLGTSIEVQTGNSVEVLSVREE 186

Query: 890  RAAAQHRIHQKAQSHVARLKEDWDDSTVSSNISKLRIQSKLEATSRRERALAYAFSQQLR 1069
              +  HR+ ++A++ V RLKEDWDDSTV SNISK RIQS+LEAT+RRERALAYAFSQQLR
Sbjct: 187  NVSVHHRVQKRARTQVFRLKEDWDDSTVISNISKKRIQSRLEATNRRERALAYAFSQQLR 246

Query: 1070 LCSKKKSNQCDTSEVNMGWSWLERWMATRPPETYSVEDRMSKQNEPIPREPRFTFGKKNF 1249
            +CSKKK  + D ++ NM WSWLERWMATR PE  SVE    KQ EP+    RF FG++  
Sbjct: 247  ICSKKKQTKSDGTQPNMSWSWLERWMATRVPEC-SVESCTGKQLEPVNNNYRFDFGERFS 305

Query: 1250 DVAAEE-ESCGSNEVSVMVDHLIINAPDVKYSHKAAKNRLKSPRTVSRRKTVPSYQISTQ 1426
            DVA EE ESCGSNEVSV  D L I A + K   K  K+RLK+ RT+SRRKT PSYQ  T+
Sbjct: 306  DVAVEEKESCGSNEVSVQFDSLSI-ASNNKDGFKHTKSRLKATRTISRRKTAPSYQCPTE 364

Query: 1427 WMKETRKDCLKEAEKDRKHKKAQQSWSTGEIKQTVES 1537
              K  +K C KE E+D++ K    S    E+K++  S
Sbjct: 365  QAKVIKKGCSKETEQDKEQKPKPPSSGGKEMKRSASS 401


>ref|XP_002528945.1| hypothetical protein RCOM_0510880 [Ricinus communis]
            gi|223531591|gb|EEF33419.1| hypothetical protein
            RCOM_0510880 [Ricinus communis]
          Length = 409

 Score =  347 bits (889), Expect = 8e-93
 Identities = 184/354 (51%), Positives = 250/354 (70%), Gaps = 4/354 (1%)
 Frame = +2

Query: 413  VKSVFSKNRSVGSHDA-YVRSYGLNKRRWSSVRSYLCGDEYNSVLADADSTSIRSSEDTI 589
            V+SVFS++RSVG+H++   RS+  NKRRW+ VRSYLCGDE+NSVLA+ DS S++SSE T+
Sbjct: 51   VRSVFSRSRSVGTHESNQARSHAGNKRRWTVVRSYLCGDEFNSVLAEEDSASVKSSEATV 110

Query: 590  TQHVAQEDLNSEDVQGEA-KEQQITKEEHSSPAIQSNEENAATVIQSAFRRFLARRKD-D 763
            TQ V  +  +  D+Q E  KE  I  ++H+S +    +E+AA VIQSAFR FLA R+  +
Sbjct: 111  TQPVLDDSASKGDIQSEVTKEDNIPNQKHNSTSELFKQEDAAIVIQSAFRNFLATRQSKE 170

Query: 764  VVKQIGQKETVQGLGSPSRESVGTSVEVQTAGSVEMLTLQEERAAAQHRIHQKAQSHVAR 943
            ++ +  ++E+V  + SP+R+SVGTS EVQT  S E+L+ ++E  +   ++ +KA++ + R
Sbjct: 171  IILEDDKQESVMAVDSPNRDSVGTSYEVQTGNSTEVLSAKQEPFSVHFQMPKKARTQIFR 230

Query: 944  LKEDWDDSTVSSNISKLRIQSKLEATSRRERALAYAFSQQLRLCSKKKSNQCDTSEVNMG 1123
            +KEDWDDSTVSSNIS++RIQ++LEAT+RRERALAYAF+QQLR+CSKKK  + D +E NMG
Sbjct: 231  IKEDWDDSTVSSNISRMRIQNRLEATNRRERALAYAFAQQLRICSKKKQTRSDGTEPNMG 290

Query: 1124 WSWLERWMATRPPETYSVEDRMSKQNEPIPREPRFTFGKKNFDVAAEE-ESCGSNEVSVM 1300
            WSWLERWMATR PE  SVE   SKQ EPI    +    K+ FD+A EE ESCGSNEVSV 
Sbjct: 291  WSWLERWMATRLPEC-SVESHTSKQFEPINSSHKLAARKRIFDIAGEERESCGSNEVSVQ 349

Query: 1301 VDHLIINAPDVKYSHKAAKNRLKSPRTVSRRKTVPSYQISTQWMKETRKDCLKE 1462
             D + +         +  +N  +S R +SRRKTVPSY    +  K  +K+C  E
Sbjct: 350  FDSMSMTTASEDGGVQTRRNWARSTRAISRRKTVPSYHCQKENCKVIKKECQNE 403


>emb|CAN65424.1| hypothetical protein VITISV_024591 [Vitis vinifera]
          Length = 384

 Score =  341 bits (874), Expect = 4e-91
 Identities = 190/349 (54%), Positives = 246/349 (70%), Gaps = 3/349 (0%)
 Frame = +2

Query: 413  VKSVFSKNRSVGSHDAYVRSYGLNKRRWSSVRSYLCGDEYNSVLADADSTSIRSSEDTIT 592
            V+SVFSK+RSV +H++ VR+  ++KRRWSSVRSYLCGDE+NSVLA+ DS S+RSSE T+T
Sbjct: 8    VRSVFSKSRSVSTHESNVRNNMVDKRRWSSVRSYLCGDEFNSVLAEEDSASVRSSEATVT 67

Query: 593  QHVAQEDLNSEDVQG-EAKEQQITKEEHSSPAIQSNEENAATVIQSAFRRFLARRKDDVV 769
            Q +  E  +  D+Q  EAK+QQ    + +S +   +EE AA VIQSAFR FLARR+++  
Sbjct: 68   QPIPDELTDEGDLQSKEAKKQQ----KQNSASNFFSEEEAAIVIQSAFRGFLARRRNEGT 123

Query: 770  KQI-GQKETVQGLGSPSRESVGTSVEVQTAGSVEMLTLQEERAAAQHRIHQKAQSHVARL 946
            K + G +E + G+ +PSRESV TS+EVQT  SVE+L+  E   AA  R+  KA++   + 
Sbjct: 124  KVMDGGQELLLGIENPSRESVDTSLEVQTGNSVEVLSDGEGSVAAHARMQHKARAQATKF 183

Query: 947  KEDWDDSTVSSNISKLRIQSKLEATSRRERALAYAFSQQLRLCSKKKSNQCDTSEVNMGW 1126
            K+DWDDSTVSS + K+RIQ+++EAT+RRERALAYAF+QQLR+CSKKK  + D  E NMGW
Sbjct: 184  KDDWDDSTVSSKVLKMRIQNRMEATTRRERALAYAFAQQLRICSKKKQTRSDGEETNMGW 243

Query: 1127 SWLERWMATRPPETYSVEDRMSKQNEPIPREPRFTFGKKNFDVAAEE-ESCGSNEVSVMV 1303
            SWLERWMATR P + SVED +S Q EP          K  FDV  EE ESCGSNEV+  +
Sbjct: 244  SWLERWMATRLPGSSSVEDHVSGQLEPTMSIQSSVMRKNFFDVGGEERESCGSNEVAAQI 303

Query: 1304 DHLIINAPDVKYSHKAAKNRLKSPRTVSRRKTVPSYQISTQWMKETRKD 1450
            D+  + +P VK S K  K RLK  R VSRRKTVP+     +  K ++KD
Sbjct: 304  DNFPVISPKVKDSSKHPKLRLKVTRGVSRRKTVPNNHCPKENTKVSKKD 352


>ref|XP_004144525.1| PREDICTED: uncharacterized protein LOC101208081 [Cucumis sativus]
            gi|449527845|ref|XP_004170919.1| PREDICTED:
            uncharacterized protein LOC101230542 [Cucumis sativus]
          Length = 395

 Score =  325 bits (832), Expect = 3e-86
 Identities = 181/376 (48%), Positives = 257/376 (68%), Gaps = 6/376 (1%)
 Frame = +2

Query: 413  VKSVFSKNRSVGSHDAYVRSYG-LNKRRWSSVRSYLCGDEYNSVLADADSTSIRSSEDTI 589
            V++VF +NRS  +H+   RS+  + +++W SVRSYLCGDEYNSVL + D+ SIRSSE T+
Sbjct: 8    VRNVFLRNRSFKTHEKNTRSHSSVERKKWHSVRSYLCGDEYNSVLVEEDAASIRSSEATV 67

Query: 590  TQHVAQEDLNSEDVQGEAKEQQITKEEHSSPAIQSNEENAATVIQSAFRRFLARRKDDVV 769
            TQ V + +++ +      K++   +E   S  +   +E AA +IQSAFR FLARR+D+ +
Sbjct: 68   TQPVEELEVSKQ------KQEPGVEESELSSQLLKRQEQAAFIIQSAFRSFLARRRDEQI 121

Query: 770  KQIGQ--KETVQGLGSPSRESVGTSVEVQTAGSVEMLTLQEERAAAQHRIHQKAQSHVAR 943
            K +    K+ ++G+ SPS ES+ TS+EVQT G+ E  ++Q+ER    +R+ QK+++ + R
Sbjct: 122  KTMDNDCKDIIEGIESPSGESLRTSIEVQT-GNSEAFSVQDERTFLSNRVQQKSKTQLHR 180

Query: 944  LKEDWDDSTVSSNISKLRIQSKLEATSRRERALAYAFSQQLRLCSKKKSNQCDTSEVNMG 1123
            LKE+WDDSTVSSN++K+RIQ++LEA++RRERALAYAFSQQLR+CSK+K ++ D  E NM 
Sbjct: 181  LKEEWDDSTVSSNVTKMRIQNRLEASTRRERALAYAFSQQLRICSKRKHSKSDVIEANMS 240

Query: 1124 WSWLERWMATRPPETYSVEDRMSKQNEPIPREPRFTFGKKNFDVAAEE-ESCGSNEVSVM 1300
            WSWLERWMATR PE  SVE    K +E I    R    ++ FD++AEE ESCGSNEVSV 
Sbjct: 241  WSWLERWMATRLPEGSSVETHTRKPSEVIDNNHRLMISQRLFDISAEEKESCGSNEVSVR 300

Query: 1301 VDHLIINAPDVKYSHKAAKNRLKSPRTVSRRKTVPSYQISTQWMKETRKD--CLKEAEKD 1474
              +   +A     S+  AKNR K    +SRRKTVPS      + K +++D   L E+E+D
Sbjct: 301  SINFSADALKNTDSN-LAKNRSKGSSDISRRKTVPSLHFDGYFTKVSKRDWVTLAESERD 359

Query: 1475 RKHKKAQQSWSTGEIK 1522
            +K ++ +Q+   GEIK
Sbjct: 360  KKSRQ-KQAGGRGEIK 374


>emb|CBI28776.3| unnamed protein product [Vitis vinifera]
          Length = 367

 Score =  320 bits (820), Expect = 8e-85
 Identities = 180/344 (52%), Positives = 238/344 (69%), Gaps = 12/344 (3%)
 Frame = +2

Query: 413  VKSVFSKNRSVGSHDAYVRSYGLNKRRWSSVRSYLCGDEYNSVLADADSTSIRSSEDTIT 592
            V+SVFSK+RSV +H++ VR+  ++KRRWSSVRSYLCGDE+NSVLA+ DS S+RSSE T+T
Sbjct: 8    VRSVFSKSRSVSTHESNVRNNMVDKRRWSSVRSYLCGDEFNSVLAEEDSASVRSSEATVT 67

Query: 593  QHVAQEDLNSEDVQG-EAKEQQITKEEHSSPAIQSNEENAATVIQSAFRRFLARRKDDVV 769
            Q +  E  +  D+Q  EAK+QQ    + +S +   +EE AA VIQSAFR FLARR+++  
Sbjct: 68   QPIPDELTDEGDLQSKEAKKQQ----KQNSASNFFSEEEAAIVIQSAFRGFLARRRNEGT 123

Query: 770  KQI-GQKETVQGLGSPSRESVGTSVEVQTAGSVEMLTLQEERAAAQHRIHQKAQSHVARL 946
            K + G +E + G+ +PSRESV TS+EVQT  SVE+L+  E   AA  R+  KA++   + 
Sbjct: 124  KVMDGGQELLLGIENPSRESVDTSLEVQTGNSVEVLSDGEGSVAAHARMQHKARAQATKF 183

Query: 947  KEDWDDSTVSSNISKLRIQSKLEATSRRERALAYAFSQQLRLCSKKKSNQCDTSEVNMGW 1126
            K+DWDDSTVSS + K+RIQ+++EAT+RRERALAYAF+QQLR+CSKKK  + D  E NMGW
Sbjct: 184  KDDWDDSTVSSKVLKMRIQNRMEATTRRERALAYAFAQQLRICSKKKQTRSDGEETNMGW 243

Query: 1127 SWLERWMATRPPETYSVEDRMSKQNEPIPREPRFTFGKKNFDVAAEE-ESCGSNEVSVMV 1303
            SWLERWMATR P + SVED +S Q EP          K  FDV  EE ESCGSNEV+  +
Sbjct: 244  SWLERWMATRLPGSSSVEDHVSGQLEPTMSIQSSVMRKNFFDVGGEERESCGSNEVAAQI 303

Query: 1304 DHLIINAPDVKYSHKAAKNRL---------KSPRTVSRRKTVPS 1408
            D+  + +P VK S K   + L         K  +T++ +K +PS
Sbjct: 304  DNFPVISPKVKDSSKHLSSGLRLQEVCRGEKLCQTITAQKRIPS 347


Top