BLASTX nr result
ID: Coptis24_contig00011800
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00011800 (501 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002314857.1| predicted protein [Populus trichocarpa] gi|2... 91 1e-16 ref|XP_002312403.1| predicted protein [Populus trichocarpa] gi|2... 84 9e-15 ref|NP_564930.1| uncharacterized protein [Arabidopsis thaliana] ... 75 5e-12 ref|XP_002887182.1| hypothetical protein ARALYDRAFT_475964 [Arab... 74 2e-11 ref|XP_002526984.1| conserved hypothetical protein [Ricinus comm... 74 2e-11 >ref|XP_002314857.1| predicted protein [Populus trichocarpa] gi|222863897|gb|EEF01028.1| predicted protein [Populus trichocarpa] Length = 311 Score = 90.5 bits (223), Expect = 1e-16 Identities = 56/163 (34%), Positives = 81/163 (49%), Gaps = 10/163 (6%) Frame = +2 Query: 41 MEIPVISRISGFEAEINRLQNPSLISRYFHLSAIEETIKVQSFWTWGALIIALIATFTSF 220 MEIPVI+RIS FE I+ LQNPS +S+ LS E+ + SFW WGAL++AL+A+FT+ Sbjct: 1 MEIPVINRISDFETGISSLQNPSFLSQILALSGAEKIHQAYSFWKWGALLLALVASFTTI 60 Query: 221 ISRLKLVVYRFQRGNSVITQPLLQQLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXR- 397 I+R+K++V RF+ + + L+ R Sbjct: 61 INRIKILVIRFKNHPFISSPSLITNQEDGDYESETDLSCSSSISLSDEEQEEEPPSTSRS 120 Query: 398 ------YDEDFTVAGN---YEETQGHNSKFKLTRRNSCSFDNF 499 +DEDF V G+ Y + Q N F+L RR + S +F Sbjct: 121 WWSINDHDEDFCVRGSGNRYIDDQWQNGNFRLRRRRNSSIGDF 163 >ref|XP_002312403.1| predicted protein [Populus trichocarpa] gi|222852223|gb|EEE89770.1| predicted protein [Populus trichocarpa] Length = 279 Score = 84.3 bits (207), Expect = 9e-15 Identities = 52/163 (31%), Positives = 79/163 (48%), Gaps = 10/163 (6%) Frame = +2 Query: 41 MEIPVISRISGFEAEINRLQNPSLISRYFHLSAIEETIKVQSFWTWGALIIALIATFTSF 220 MEIPVI+RIS FE + LQNP+ +S+ LS +E+ + SFW WGALI+AL A+FT+ Sbjct: 1 MEIPVINRISDFETGLASLQNPTFLSQILALSGVEKIHQAYSFWKWGALILALAASFTAI 60 Query: 221 ISRLKLVVYRFQRGNSVITQPLLQQLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXR- 397 I+R+K+++ RF+ + + L+ R Sbjct: 61 INRIKILIIRFKNHPFISSPSLISNQEDCDYESETDLSCSSSISLSDDEQEEESTSSSRS 120 Query: 398 ------YDEDFTVAGN---YEETQGHNSKFKLTRRNSCSFDNF 499 +D+DF V G+ Y + Q F+L RR + S +F Sbjct: 121 WWSINDHDQDFRVRGSGNRYIDDQCQGGNFRLRRRRNSSIGDF 163 >ref|NP_564930.1| uncharacterized protein [Arabidopsis thaliana] gi|6714347|gb|AAF26038.1|AC015986_1 unknown protein; 9003-8083 [Arabidopsis thaliana] gi|16648773|gb|AAL25577.1| At1g68440/T2E12_1 [Arabidopsis thaliana] gi|21592921|gb|AAM64871.1| unknown [Arabidopsis thaliana] gi|21700823|gb|AAM70535.1| At1g68440/T2E12_1 [Arabidopsis thaliana] gi|332196673|gb|AEE34794.1| uncharacterized protein [Arabidopsis thaliana] Length = 306 Score = 75.1 bits (183), Expect = 5e-12 Identities = 36/83 (43%), Positives = 54/83 (65%) Frame = +2 Query: 41 MEIPVISRISGFEAEINRLQNPSLISRYFHLSAIEETIKVQSFWTWGALIIALIATFTSF 220 ME+PVI+RI FE IN + +PS +SR +S I + + FW WGALIIA +A FT+F Sbjct: 1 MEVPVINRIRDFEVGINSINDPSFLSRSVAVSGIGKLHQAYGFWKWGALIIAFLAYFTNF 60 Query: 221 ISRLKLVVYRFQRGNSVITQPLL 289 +S+L +V R ++ + ++ P L Sbjct: 61 VSKLNSLVVRLRKIDVSVSSPTL 83 >ref|XP_002887182.1| hypothetical protein ARALYDRAFT_475964 [Arabidopsis lyrata subsp. lyrata] gi|297333023|gb|EFH63441.1| hypothetical protein ARALYDRAFT_475964 [Arabidopsis lyrata subsp. lyrata] Length = 301 Score = 73.6 bits (179), Expect = 2e-11 Identities = 36/83 (43%), Positives = 53/83 (63%) Frame = +2 Query: 41 MEIPVISRISGFEAEINRLQNPSLISRYFHLSAIEETIKVQSFWTWGALIIALIATFTSF 220 ME+PVI+RI FE IN + +PS +SR +S I + + FW WGALIIA +A FT+F Sbjct: 1 MEVPVINRIRDFEVGINSINDPSFLSRSVAVSGIGKLHQAYGFWKWGALIIAFLAYFTNF 60 Query: 221 ISRLKLVVYRFQRGNSVITQPLL 289 +S+L +V R + + ++ P L Sbjct: 61 VSKLNSLVVRLIKIDVSVSSPTL 83 >ref|XP_002526984.1| conserved hypothetical protein [Ricinus communis] gi|223533619|gb|EEF35356.1| conserved hypothetical protein [Ricinus communis] Length = 337 Score = 73.6 bits (179), Expect = 2e-11 Identities = 36/72 (50%), Positives = 51/72 (70%) Frame = +2 Query: 41 MEIPVISRISGFEAEINRLQNPSLISRYFHLSAIEETIKVQSFWTWGALIIALIATFTSF 220 MEIPVI+RI FEA LQNPS +S+ LS +E+ + FW WGALI+AL+A+F++ Sbjct: 1 MEIPVINRIGDFEAS---LQNPSFLSQAITLSGVEKIHQAYGFWKWGALILALVASFSTI 57 Query: 221 ISRLKLVVYRFQ 256 I+R+K ++ R Q Sbjct: 58 INRIKNLIIRIQ 69