BLASTX nr result

ID: Coptis24_contig00011798 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00011798
         (827 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635591.1| PREDICTED: uncharacterized protein LOC100854...   209   6e-52
ref|XP_002317978.1| predicted protein [Populus trichocarpa] gi|2...   191   1e-46
gb|ABK95263.1| unknown [Populus trichocarpa]                          191   1e-46
emb|CAN77176.1| hypothetical protein VITISV_038217 [Vitis vinifera]   191   1e-46
ref|XP_002514738.1| conserved hypothetical protein [Ricinus comm...   185   9e-45

>ref|XP_003635591.1| PREDICTED: uncharacterized protein LOC100854331 [Vitis vinifera]
           gi|359497642|ref|XP_003635595.1| PREDICTED:
           uncharacterized protein LOC100854601 [Vitis vinifera]
           gi|296087032|emb|CBI33296.3| unnamed protein product
           [Vitis vinifera] gi|296088957|emb|CBI38523.3| unnamed
           protein product [Vitis vinifera]
          Length = 181

 Score =  209 bits (532), Expect = 6e-52
 Identities = 99/158 (62%), Positives = 113/158 (71%), Gaps = 1/158 (0%)
 Frame = -2

Query: 715 MAKAIMGFTSPKPHIH-SPSFTTTXXXXXXXXXXXXXXXXXXXXXXXXGEVMRNSRANVC 539
           MA+AIMGFT  KP+ H S +  T                          E  ++ RA++C
Sbjct: 1   MAEAIMGFTIMKPNFHNSYAQPTKMDISPCSRLLRQCSSSRFNNGWHQTESSKSKRASLC 60

Query: 538 TVRALPDWHLMAVLVQHMEGQRDLITHKSVWHLNDKTMKNVYTMYTMFTCWGCCFFGAMK 359
            V ALPDW LMAVLV+H+EGQRDLITHKS+WHLND+T+KNVYT Y MFTCWGCCFFG+ K
Sbjct: 61  RVNALPDWPLMAVLVEHVEGQRDLITHKSIWHLNDETIKNVYTFYIMFTCWGCCFFGSTK 120

Query: 358 DPYYDGEKYRKDGGDGTGHWVYEKQEDIEEKARAALWR 245
           DPYYD E+YRKDGGDGTGHWVYEKQEDIEE ARA LWR
Sbjct: 121 DPYYDSEQYRKDGGDGTGHWVYEKQEDIEEAARAELWR 158


>ref|XP_002317978.1| predicted protein [Populus trichocarpa] gi|222858651|gb|EEE96198.1|
           predicted protein [Populus trichocarpa]
          Length = 180

 Score =  191 bits (486), Expect = 1e-46
 Identities = 89/157 (56%), Positives = 104/157 (66%)
 Frame = -2

Query: 715 MAKAIMGFTSPKPHIHSPSFTTTXXXXXXXXXXXXXXXXXXXXXXXXGEVMRNSRANVCT 536
           MAKAI GFT  KPH+ S    T                          +     RA++  
Sbjct: 1   MAKAITGFTITKPHMLSSLQKTKLDLKPCSGELWQCSSDGLLSGWLQHKRSNKKRASLSK 60

Query: 535 VRALPDWHLMAVLVQHMEGQRDLITHKSVWHLNDKTMKNVYTMYTMFTCWGCCFFGAMKD 356
           V A PDW LMAV+V+H+EGQRDLITHKS+WHL+D+ +KNVY  Y MFTCWGC FFG+MKD
Sbjct: 61  VNAFPDWPLMAVMVEHIEGQRDLITHKSIWHLSDRAIKNVYVFYLMFTCWGCLFFGSMKD 120

Query: 355 PYYDGEKYRKDGGDGTGHWVYEKQEDIEEKARAALWR 245
           PYYD E YRKDGGDG+GHWVY+KQ+DIEE ARA LWR
Sbjct: 121 PYYDSEAYRKDGGDGSGHWVYDKQDDIEESARAELWR 157


>gb|ABK95263.1| unknown [Populus trichocarpa]
          Length = 180

 Score =  191 bits (486), Expect = 1e-46
 Identities = 89/157 (56%), Positives = 104/157 (66%)
 Frame = -2

Query: 715 MAKAIMGFTSPKPHIHSPSFTTTXXXXXXXXXXXXXXXXXXXXXXXXGEVMRNSRANVCT 536
           MAKAI GFT  KPH+ S    T                          +     RA++  
Sbjct: 1   MAKAITGFTITKPHMLSSLQKTKLDLKPCSGGLWQCSSDGLLSGWLQHKRSNKKRASLSK 60

Query: 535 VRALPDWHLMAVLVQHMEGQRDLITHKSVWHLNDKTMKNVYTMYTMFTCWGCCFFGAMKD 356
           V A PDW LMAV+V+H+EGQRDLITHKS+WHL+D+ +KNVY  Y MFTCWGC FFG+MKD
Sbjct: 61  VNAFPDWPLMAVMVEHIEGQRDLITHKSIWHLSDRAIKNVYVFYLMFTCWGCLFFGSMKD 120

Query: 355 PYYDGEKYRKDGGDGTGHWVYEKQEDIEEKARAALWR 245
           PYYD E YRKDGGDG+GHWVY+KQ+DIEE ARA LWR
Sbjct: 121 PYYDSEAYRKDGGDGSGHWVYDKQDDIEESARAELWR 157


>emb|CAN77176.1| hypothetical protein VITISV_038217 [Vitis vinifera]
          Length = 209

 Score =  191 bits (486), Expect = 1e-46
 Identities = 82/97 (84%), Positives = 89/97 (91%)
 Frame = -2

Query: 535 VRALPDWHLMAVLVQHMEGQRDLITHKSVWHLNDKTMKNVYTMYTMFTCWGCCFFGAMKD 356
           V ALPDW LMAVLV+H+EGQRDLITHKS+WHLND+T+KNVYT Y MFTCWGCCFFG+ KD
Sbjct: 90  VNALPDWPLMAVLVEHVEGQRDLITHKSIWHLNDETIKNVYTFYIMFTCWGCCFFGSTKD 149

Query: 355 PYYDGEKYRKDGGDGTGHWVYEKQEDIEEKARAALWR 245
           PYYD E+YRKDGGDGTGHWVYEKQEDIEE ARA LWR
Sbjct: 150 PYYDSEQYRKDGGDGTGHWVYEKQEDIEEAARAELWR 186


>ref|XP_002514738.1| conserved hypothetical protein [Ricinus communis]
           gi|223546342|gb|EEF47844.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 182

 Score =  185 bits (470), Expect = 9e-45
 Identities = 88/157 (56%), Positives = 106/157 (67%), Gaps = 1/157 (0%)
 Frame = -2

Query: 712 AKAIMGFTSPKPHIHSPSFTTTXXXXXXXXXXXXXXXXXXXXXXXXGEVMRN-SRANVCT 536
           A+AIMGFT  K H+H+    T                          E  ++ SR ++  
Sbjct: 3   AEAIMGFTITKSHLHNSFSPTKLDLNPSSRLHKQCSSSRFFNGWQQAEGSKSKSRGSLSK 62

Query: 535 VRALPDWHLMAVLVQHMEGQRDLITHKSVWHLNDKTMKNVYTMYTMFTCWGCCFFGAMKD 356
           V A PD  LMAVLV+HMEGQRDLIT+K++WHL+D+ +KNVY  Y MFTCWGC FFG+MKD
Sbjct: 63  VNAFPDLTLMAVLVEHMEGQRDLITNKTIWHLSDRAIKNVYVFYLMFTCWGCLFFGSMKD 122

Query: 355 PYYDGEKYRKDGGDGTGHWVYEKQEDIEEKARAALWR 245
           P+YD E+YRKDGGDGTGHW+YEKQEDIEE ARA LWR
Sbjct: 123 PFYDSEEYRKDGGDGTGHWIYEKQEDIEESARAELWR 159


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