BLASTX nr result
ID: Coptis24_contig00011791
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00011791 (1030 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_004133800.1| PREDICTED: arginine/serine-rich-splicing fac... 261 2e-67 emb|CBI40588.3| unnamed protein product [Vitis vinifera] 261 2e-67 ref|XP_002267297.1| PREDICTED: arginine/serine-rich-splicing fac... 261 2e-67 ref|XP_003548264.1| PREDICTED: arginine/serine-rich-splicing fac... 258 2e-66 ref|XP_002523299.1| arginine/serine-rich splicing factor, putati... 257 3e-66 >ref|XP_004133800.1| PREDICTED: arginine/serine-rich-splicing factor RSP31-like [Cucumis sativus] gi|449477961|ref|XP_004155176.1| PREDICTED: arginine/serine-rich-splicing factor RSP31-like [Cucumis sativus] Length = 253 Score = 261 bits (668), Expect = 2e-67 Identities = 141/214 (65%), Positives = 155/214 (72%), Gaps = 3/214 (1%) Frame = -1 Query: 1030 GFAFVYFEDERDGDDAIRHLDNTPFGYSKRRLSVEWAXXXXXXXXXXXSKSMANQRPTKT 851 GFAFVYFEDERD +DAIR LDN PFGY +RRLSVEWA KSMANQRPTKT Sbjct: 36 GFAFVYFEDERDAEDAIRGLDNLPFGYDRRRLSVEWARGERGRHRDGS-KSMANQRPTKT 94 Query: 850 LFVINFDPINTRTRDIEKHFEPFGKILHVRIRRNFAFVQFDKQEEATKALESTHMSKVLG 671 LFVINFDPI TR RDIE+HFEP+GK+L+VRIRRNFAFVQF+ QE+ATKALE THMSK+L Sbjct: 95 LFVINFDPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECTHMSKILD 154 Query: 670 RVVSVEYALRDDGERGDR-HESPRR--GYGGRGDSPYGXXXXXXXXXXXXXPDYGRARSP 500 RVVSVEYALRDDGERGD ESPRR GYG GDSP Y R+ SP Sbjct: 155 RVVSVEYALRDDGERGDPFDESPRRAGGYGRPGDSP-----------------YRRSPSP 197 Query: 499 DYGRARSPDYGRGRSPVYDKYNGPSYNGGKSSEY 398 + R SPDYGR SP YD+YNGP Y +S +Y Sbjct: 198 VFRRRPSPDYGRAHSPAYDRYNGP-YERRRSPDY 230 >emb|CBI40588.3| unnamed protein product [Vitis vinifera] Length = 224 Score = 261 bits (667), Expect = 2e-67 Identities = 138/213 (64%), Positives = 156/213 (73%), Gaps = 2/213 (0%) Frame = -1 Query: 1030 GFAFVYFEDERDGDDAIRHLDNTPFGYSKRRLSVEWAXXXXXXXXXXXSKSMANQRPTKT 851 GFAFVYFEDE D DDAIR LDN PFGY +RRLSVEWA +SMANQRPTKT Sbjct: 19 GFAFVYFEDEHDADDAIRGLDNIPFGYDRRRLSVEWAKGERGRHREGS-RSMANQRPTKT 77 Query: 850 LFVINFDPINTRTRDIEKHFEPFGKILHVRIRRNFAFVQFDKQEEATKALESTHMSKVLG 671 LFVINFDPI TR RDIE+HFEP+GK+LHVRIRRNFAFVQ++ QE+ATKALE THMSK+L Sbjct: 78 LFVINFDPIRTRIRDIERHFEPYGKVLHVRIRRNFAFVQYETQEDATKALECTHMSKILD 137 Query: 670 RVVSVEYALRDDGERGDRHESPRRG-YGGRGDSPYGXXXXXXXXXXXXXPDYGRARSPDY 494 RVVSVEYALRDD D+++SPRRG Y RG+SPYG R+ SP Sbjct: 138 RVVSVEYALRDDS---DKYDSPRRGGYSRRGESPYG-----------------RSPSPVN 177 Query: 493 GRAR-SPDYGRGRSPVYDKYNGPSYNGGKSSEY 398 R R SPDYGR +SPVYD+YNGP+Y +S EY Sbjct: 178 RRGRPSPDYGRAQSPVYDRYNGPAYERNRSPEY 210 >ref|XP_002267297.1| PREDICTED: arginine/serine-rich-splicing factor RSP31-like [Vitis vinifera] Length = 241 Score = 261 bits (667), Expect = 2e-67 Identities = 138/213 (64%), Positives = 156/213 (73%), Gaps = 2/213 (0%) Frame = -1 Query: 1030 GFAFVYFEDERDGDDAIRHLDNTPFGYSKRRLSVEWAXXXXXXXXXXXSKSMANQRPTKT 851 GFAFVYFEDE D DDAIR LDN PFGY +RRLSVEWA +SMANQRPTKT Sbjct: 36 GFAFVYFEDEHDADDAIRGLDNIPFGYDRRRLSVEWAKGERGRHREGS-RSMANQRPTKT 94 Query: 850 LFVINFDPINTRTRDIEKHFEPFGKILHVRIRRNFAFVQFDKQEEATKALESTHMSKVLG 671 LFVINFDPI TR RDIE+HFEP+GK+LHVRIRRNFAFVQ++ QE+ATKALE THMSK+L Sbjct: 95 LFVINFDPIRTRIRDIERHFEPYGKVLHVRIRRNFAFVQYETQEDATKALECTHMSKILD 154 Query: 670 RVVSVEYALRDDGERGDRHESPRRG-YGGRGDSPYGXXXXXXXXXXXXXPDYGRARSPDY 494 RVVSVEYALRDD D+++SPRRG Y RG+SPYG R+ SP Sbjct: 155 RVVSVEYALRDDS---DKYDSPRRGGYSRRGESPYG-----------------RSPSPVN 194 Query: 493 GRAR-SPDYGRGRSPVYDKYNGPSYNGGKSSEY 398 R R SPDYGR +SPVYD+YNGP+Y +S EY Sbjct: 195 RRGRPSPDYGRAQSPVYDRYNGPAYERNRSPEY 227 >ref|XP_003548264.1| PREDICTED: arginine/serine-rich-splicing factor RSP31-like [Glycine max] Length = 264 Score = 258 bits (658), Expect = 2e-66 Identities = 138/227 (60%), Positives = 154/227 (67%), Gaps = 16/227 (7%) Frame = -1 Query: 1030 GFAFVYFEDERDGDDAIRHLDNTPFGYSKRRLSVEWAXXXXXXXXXXXSKSMANQRPTKT 851 GFAFVY+EDERD ++AIR LDN PFG+ KRRLSVEWA S ANQ+PTKT Sbjct: 36 GFAFVYYEDERDAEEAIRALDNVPFGHEKRRLSVEWARGERGRHRDG---SKANQKPTKT 92 Query: 850 LFVINFDPINTRTRDIEKHFEPFGKILHVRIRRNFAFVQFDKQEEATKALESTHMSKVLG 671 LFVINFDPI TR RDIEKHFEP+G +LHVRIRRNFAFVQF+ QE+ATKA+E T+MSK+L Sbjct: 93 LFVINFDPIRTRVRDIEKHFEPYGNVLHVRIRRNFAFVQFETQEDATKAIECTNMSKILD 152 Query: 670 RVVSVEYALRDDGERGDRHESPRRGYGGRGDSPYGXXXXXXXXXXXXXPDYG-------- 515 RVVSVEYALRDDGERGD ++SPRRG R SPY PDYG Sbjct: 153 RVVSVEYALRDDGERGDNYDSPRRGGYERSPSPY---------HRRPSPDYGRPRSPVYD 203 Query: 514 --------RARSPDYGRARSPDYGRGRSPVYDKYNGPSYNGGKSSEY 398 R RSPDYGR RSPDYGR RSP Y + P Y +S EY Sbjct: 204 RYNGGGPDRRRSPDYGRHRSPDYGRRRSPDYGRRKSPDYGKPRSPEY 250 >ref|XP_002523299.1| arginine/serine-rich splicing factor, putative [Ricinus communis] gi|223537387|gb|EEF39015.1| arginine/serine-rich splicing factor, putative [Ricinus communis] Length = 259 Score = 257 bits (657), Expect = 3e-66 Identities = 133/211 (63%), Positives = 151/211 (71%) Frame = -1 Query: 1030 GFAFVYFEDERDGDDAIRHLDNTPFGYSKRRLSVEWAXXXXXXXXXXXSKSMANQRPTKT 851 GFAFVYFEDERD DAIR LDN FGY +R+LSVEWA +SMANQRPTKT Sbjct: 37 GFAFVYFEDERDAADAIRGLDNISFGYDRRKLSVEWARGERGRHRDGS-RSMANQRPTKT 95 Query: 850 LFVINFDPINTRTRDIEKHFEPFGKILHVRIRRNFAFVQFDKQEEATKALESTHMSKVLG 671 LFVINFDPI+TR DI++HFE +G++LHVRIRRNFAFVQF+ QE+ATKALE THM+K+L Sbjct: 96 LFVINFDPIHTRVEDIKRHFERYGEVLHVRIRRNFAFVQFETQEDATKALECTHMTKILD 155 Query: 670 RVVSVEYALRDDGERGDRHESPRRGYGGRGDSPYGXXXXXXXXXXXXXPDYGRARSPDYG 491 RVVSVEYALRDD ERGD+ +SPRRG YGR+ SP Y Sbjct: 156 RVVSVEYALRDDSERGDKSDSPRRG-----------------------SHYGRSPSPVYR 192 Query: 490 RARSPDYGRGRSPVYDKYNGPSYNGGKSSEY 398 R SPDYGR RSPVYDKYNGPSY+ +S EY Sbjct: 193 RRPSPDYGRARSPVYDKYNGPSYDRRRSPEY 223