BLASTX nr result
ID: Coptis24_contig00011790
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00011790 (284 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_001241419.1| uncharacterized protein LOC100819671 [Glycin... 95 5e-18 gb|ACU14236.1| unknown [Glycine max] 95 5e-18 ref|NP_001236558.1| RAR1 protein [Glycine max] gi|208964716|gb|A... 95 5e-18 gb|AFK40691.1| unknown [Lotus japonicus] 94 1e-17 ref|XP_002510896.1| rar1, putative [Ricinus communis] gi|2235500... 94 1e-17 >ref|NP_001241419.1| uncharacterized protein LOC100819671 [Glycine max] gi|255640086|gb|ACU20334.1| unknown [Glycine max] gi|288310306|gb|ADC45392.1| RAR1-2 [Glycine max] Length = 224 Score = 95.1 bits (235), Expect = 5e-18 Identities = 38/42 (90%), Positives = 40/42 (95%) Frame = +2 Query: 2 GPAVFHDRMRGWKCCDIHVKEFDEFIDIPPCAKGWHNSDPVS 127 GPAVFHDRMRGWKCCDIHVKEFDEF+ IPPCAKGWHN+DP S Sbjct: 183 GPAVFHDRMRGWKCCDIHVKEFDEFMSIPPCAKGWHNADPES 224 >gb|ACU14236.1| unknown [Glycine max] Length = 224 Score = 95.1 bits (235), Expect = 5e-18 Identities = 38/42 (90%), Positives = 40/42 (95%) Frame = +2 Query: 2 GPAVFHDRMRGWKCCDIHVKEFDEFIDIPPCAKGWHNSDPVS 127 GPAVFHDRMRGWKCCDIHVKEFDEF+ IPPCAKGWHN+DP S Sbjct: 183 GPAVFHDRMRGWKCCDIHVKEFDEFMSIPPCAKGWHNADPES 224 >ref|NP_001236558.1| RAR1 protein [Glycine max] gi|208964716|gb|ACI31548.1| RAR1 protein [Glycine max] gi|288310308|gb|ADC45393.1| RAR1-1 [Glycine max] Length = 224 Score = 95.1 bits (235), Expect = 5e-18 Identities = 38/42 (90%), Positives = 40/42 (95%) Frame = +2 Query: 2 GPAVFHDRMRGWKCCDIHVKEFDEFIDIPPCAKGWHNSDPVS 127 GPAVFHDRMRGWKCCDIHVKEFDEF+ IPPCAKGWHN+DP S Sbjct: 183 GPAVFHDRMRGWKCCDIHVKEFDEFMSIPPCAKGWHNADPES 224 >gb|AFK40691.1| unknown [Lotus japonicus] Length = 224 Score = 94.0 bits (232), Expect = 1e-17 Identities = 37/42 (88%), Positives = 39/42 (92%) Frame = +2 Query: 2 GPAVFHDRMRGWKCCDIHVKEFDEFIDIPPCAKGWHNSDPVS 127 GPAVFHDRMRGWKCCD+HVKEFDEFI IPPC KGWHN+DP S Sbjct: 183 GPAVFHDRMRGWKCCDVHVKEFDEFISIPPCTKGWHNADPDS 224 >ref|XP_002510896.1| rar1, putative [Ricinus communis] gi|223550011|gb|EEF51498.1| rar1, putative [Ricinus communis] Length = 215 Score = 94.0 bits (232), Expect = 1e-17 Identities = 36/42 (85%), Positives = 40/42 (95%) Frame = +2 Query: 2 GPAVFHDRMRGWKCCDIHVKEFDEFIDIPPCAKGWHNSDPVS 127 GPAVFHDR+RGWKCCD+HVKEFDEF+ IPPC KGWHN+DPVS Sbjct: 174 GPAVFHDRLRGWKCCDVHVKEFDEFMTIPPCTKGWHNADPVS 215