BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00011790
         (284 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001241419.1| uncharacterized protein LOC100819671 [Glycin...    95   5e-18
gb|ACU14236.1| unknown [Glycine max]                                   95   5e-18
ref|NP_001236558.1| RAR1 protein [Glycine max] gi|208964716|gb|A...    95   5e-18
gb|AFK40691.1| unknown [Lotus japonicus]                               94   1e-17
ref|XP_002510896.1| rar1, putative [Ricinus communis] gi|2235500...    94   1e-17

>ref|NP_001241419.1| uncharacterized protein LOC100819671 [Glycine max]
           gi|255640086|gb|ACU20334.1| unknown [Glycine max]
           gi|288310306|gb|ADC45392.1| RAR1-2 [Glycine max]
          Length = 224

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 38/42 (90%), Positives = 40/42 (95%)
 Frame = +2

Query: 2   GPAVFHDRMRGWKCCDIHVKEFDEFIDIPPCAKGWHNSDPVS 127
           GPAVFHDRMRGWKCCDIHVKEFDEF+ IPPCAKGWHN+DP S
Sbjct: 183 GPAVFHDRMRGWKCCDIHVKEFDEFMSIPPCAKGWHNADPES 224


>gb|ACU14236.1| unknown [Glycine max]
          Length = 224

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 38/42 (90%), Positives = 40/42 (95%)
 Frame = +2

Query: 2   GPAVFHDRMRGWKCCDIHVKEFDEFIDIPPCAKGWHNSDPVS 127
           GPAVFHDRMRGWKCCDIHVKEFDEF+ IPPCAKGWHN+DP S
Sbjct: 183 GPAVFHDRMRGWKCCDIHVKEFDEFMSIPPCAKGWHNADPES 224


>ref|NP_001236558.1| RAR1 protein [Glycine max] gi|208964716|gb|ACI31548.1| RAR1 protein
           [Glycine max] gi|288310308|gb|ADC45393.1| RAR1-1
           [Glycine max]
          Length = 224

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 38/42 (90%), Positives = 40/42 (95%)
 Frame = +2

Query: 2   GPAVFHDRMRGWKCCDIHVKEFDEFIDIPPCAKGWHNSDPVS 127
           GPAVFHDRMRGWKCCDIHVKEFDEF+ IPPCAKGWHN+DP S
Sbjct: 183 GPAVFHDRMRGWKCCDIHVKEFDEFMSIPPCAKGWHNADPES 224


>gb|AFK40691.1| unknown [Lotus japonicus]
          Length = 224

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 37/42 (88%), Positives = 39/42 (92%)
 Frame = +2

Query: 2   GPAVFHDRMRGWKCCDIHVKEFDEFIDIPPCAKGWHNSDPVS 127
           GPAVFHDRMRGWKCCD+HVKEFDEFI IPPC KGWHN+DP S
Sbjct: 183 GPAVFHDRMRGWKCCDVHVKEFDEFISIPPCTKGWHNADPDS 224


>ref|XP_002510896.1| rar1, putative [Ricinus communis] gi|223550011|gb|EEF51498.1| rar1,
           putative [Ricinus communis]
          Length = 215

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 36/42 (85%), Positives = 40/42 (95%)
 Frame = +2

Query: 2   GPAVFHDRMRGWKCCDIHVKEFDEFIDIPPCAKGWHNSDPVS 127
           GPAVFHDR+RGWKCCD+HVKEFDEF+ IPPC KGWHN+DPVS
Sbjct: 174 GPAVFHDRLRGWKCCDVHVKEFDEFMTIPPCTKGWHNADPVS 215