BLASTX nr result
ID: Coptis24_contig00011789
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00011789 (1420 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002271592.1| PREDICTED: heterogeneous nuclear ribonucleop... 275 2e-71 emb|CBI39777.3| unnamed protein product [Vitis vinifera] 271 2e-70 ref|XP_004149406.1| PREDICTED: nuclear polyadenylated RNA-bindin... 268 3e-69 ref|XP_003542187.1| PREDICTED: DAZ-associated protein 1-like [Gl... 265 2e-68 ref|XP_002522793.1| Heterogeneous nuclear ribonucleoprotein A1, ... 265 2e-68 >ref|XP_002271592.1| PREDICTED: heterogeneous nuclear ribonucleoprotein 27C [Vitis vinifera] gi|147768836|emb|CAN78130.1| hypothetical protein VITISV_036088 [Vitis vinifera] Length = 348 Score = 275 bits (704), Expect = 2e-71 Identities = 155/275 (56%), Positives = 168/275 (61%), Gaps = 1/275 (0%) Frame = -1 Query: 1417 KYGGITDSVIMKDRYTGHPRGFGFITYADPSVVDIVIEETHVINGKXXXXXXXXXXXXXX 1238 KYG ITDSVIMKDRYTG PRGFGFITYADPSVVD VIE+THVIN Sbjct: 41 KYGDITDSVIMKDRYTGQPRGFGFITYADPSVVDRVIEDTHVIN---------------- 84 Query: 1237 XXXXXXXXXXXXXXXXXVINGKQVEIKRTIPKGSSQSKDFKTKKIFVGGVPTTVTEDEFK 1058 GKQVEIKRTIPKGS QSKDFKTKKIFVGGVP+TVTEDEFK Sbjct: 85 --------------------GKQVEIKRTIPKGSGQSKDFKTKKIFVGGVPSTVTEDEFK 124 Query: 1057 NFFSKYGNVVEHQIIRDHTTNRSRGFGFIVYDNEQVVDDILVNGNMIDMDGTQVEIKKAE 878 NFFSKYG VVEHQIIRDH TNRSRGFGFI++D+E+VVD+++ GNMIDM GTQVEIKKAE Sbjct: 125 NFFSKYGKVVEHQIIRDHETNRSRGFGFIIFDSEEVVDEMISKGNMIDMAGTQVEIKKAE 184 Query: 877 PKKTSNPPSAPAFASDSRVRPLXXXXXXXXXXXXXXXXXXXXXXYRTP-XXXXXXXXXXX 701 PKK SNPP APA+ S+SR R YRTP Sbjct: 185 PKKASNPPPAPAYGSNSRARSFSDGFGGFGSSYGGFDSGFGPGPYRTPGGVGGRLGGYGG 244 Query: 700 XXXXXXXXXXXXXXXXXXGIDNYQGESPLGYSSRF 596 + Y+GES LGYSSRF Sbjct: 245 YGSSGSEFGGGYGGFGSSSLGGYRGESSLGYSSRF 279 Score = 66.6 bits (161), Expect = 1e-08 Identities = 33/79 (41%), Positives = 49/79 (62%) Frame = -1 Query: 1108 KIFVGGVPTTVTEDEFKNFFSKYGNVVEHQIIRDHTTNRSRGFGFIVYDNEQVVDDILVN 929 KIF+GG+ T F F KYG++ + I++D T + RGFGFI Y + VVD ++ + Sbjct: 20 KIFIGGLAKDTTYATFNKHFGKYGDITDSVIMKDRYTGQPRGFGFITYADPSVVDRVIED 79 Query: 928 GNMIDMDGTQVEIKKAEPK 872 ++I +G QVEIK+ PK Sbjct: 80 THVI--NGKQVEIKRTIPK 96 >emb|CBI39777.3| unnamed protein product [Vitis vinifera] Length = 293 Score = 271 bits (694), Expect = 2e-70 Identities = 140/200 (70%), Positives = 151/200 (75%) Frame = -1 Query: 1417 KYGGITDSVIMKDRYTGHPRGFGFITYADPSVVDIVIEETHVINGKXXXXXXXXXXXXXX 1238 KYG ITDSVIMKDRYTG PRGFGFITYADPSVVD VIE+THVIN Sbjct: 41 KYGDITDSVIMKDRYTGQPRGFGFITYADPSVVDRVIEDTHVIN---------------- 84 Query: 1237 XXXXXXXXXXXXXXXXXVINGKQVEIKRTIPKGSSQSKDFKTKKIFVGGVPTTVTEDEFK 1058 GKQVEIKRTIPKGS QSKDFKTKKIFVGGVP+TVTEDEFK Sbjct: 85 --------------------GKQVEIKRTIPKGSGQSKDFKTKKIFVGGVPSTVTEDEFK 124 Query: 1057 NFFSKYGNVVEHQIIRDHTTNRSRGFGFIVYDNEQVVDDILVNGNMIDMDGTQVEIKKAE 878 NFFSKYG VVEHQIIRDH TNRSRGFGFI++D+E+VVD+++ GNMIDM GTQVEIKKAE Sbjct: 125 NFFSKYGKVVEHQIIRDHETNRSRGFGFIIFDSEEVVDEMISKGNMIDMAGTQVEIKKAE 184 Query: 877 PKKTSNPPSAPAFASDSRVR 818 PKK SNPP APA+ S+SR R Sbjct: 185 PKKASNPPPAPAYGSNSRAR 204 Score = 66.6 bits (161), Expect = 1e-08 Identities = 33/79 (41%), Positives = 49/79 (62%) Frame = -1 Query: 1108 KIFVGGVPTTVTEDEFKNFFSKYGNVVEHQIIRDHTTNRSRGFGFIVYDNEQVVDDILVN 929 KIF+GG+ T F F KYG++ + I++D T + RGFGFI Y + VVD ++ + Sbjct: 20 KIFIGGLAKDTTYATFNKHFGKYGDITDSVIMKDRYTGQPRGFGFITYADPSVVDRVIED 79 Query: 928 GNMIDMDGTQVEIKKAEPK 872 ++I +G QVEIK+ PK Sbjct: 80 THVI--NGKQVEIKRTIPK 96 >ref|XP_004149406.1| PREDICTED: nuclear polyadenylated RNA-binding protein 4-like [Cucumis sativus] gi|449496860|ref|XP_004160246.1| PREDICTED: nuclear polyadenylated RNA-binding protein 4-like [Cucumis sativus] Length = 347 Score = 268 bits (685), Expect = 3e-69 Identities = 148/273 (54%), Positives = 164/273 (60%) Frame = -1 Query: 1414 YGGITDSVIMKDRYTGHPRGFGFITYADPSVVDIVIEETHVINGKXXXXXXXXXXXXXXX 1235 YG ITDSVIMKDRYTG PRGFGFITYADPSVVD VIE+THVIN Sbjct: 42 YGEITDSVIMKDRYTGQPRGFGFITYADPSVVDKVIEDTHVIN----------------- 84 Query: 1234 XXXXXXXXXXXXXXXXVINGKQVEIKRTIPKGSSQSKDFKTKKIFVGGVPTTVTEDEFKN 1055 GKQVEIKRTIPKG QSKDFKTKKIFVGG+P+TVTEDEFK+ Sbjct: 85 -------------------GKQVEIKRTIPKGQGQSKDFKTKKIFVGGIPSTVTEDEFKH 125 Query: 1054 FFSKYGNVVEHQIIRDHTTNRSRGFGFIVYDNEQVVDDILVNGNMIDMDGTQVEIKKAEP 875 FFSKYG +VEHQIIRDH TNRSRGFGFIV++ E+VVD+IL GNMIDM GTQVEIKKAEP Sbjct: 126 FFSKYGKIVEHQIIRDHETNRSRGFGFIVFEEEEVVDEILSKGNMIDMSGTQVEIKKAEP 185 Query: 874 KKTSNPPSAPAFASDSRVRPLXXXXXXXXXXXXXXXXXXXXXXYRTPXXXXXXXXXXXXX 695 KK+SNP APA+ S+SR R +R P Sbjct: 186 KKSSNPLPAPAYGSNSRARTFNDGFGGYGGSYGDFDAGFGPGPFRNPGGIGGRIGSGYGY 245 Query: 694 XXXXXXXXXXXXXXXXGIDNYQGESPLGYSSRF 596 + Y+G+S LGYSSRF Sbjct: 246 GSGGDFGGGYGGFGGNSLGGYRGDSSLGYSSRF 278 Score = 66.2 bits (160), Expect = 2e-08 Identities = 32/79 (40%), Positives = 48/79 (60%) Frame = -1 Query: 1108 KIFVGGVPTTVTEDEFKNFFSKYGNVVEHQIIRDHTTNRSRGFGFIVYDNEQVVDDILVN 929 KIF+GG+ T +F F YG + + I++D T + RGFGFI Y + VVD ++ + Sbjct: 20 KIFIGGLAKDTTYTQFNKHFGNYGEITDSVIMKDRYTGQPRGFGFITYADPSVVDKVIED 79 Query: 928 GNMIDMDGTQVEIKKAEPK 872 ++I +G QVEIK+ PK Sbjct: 80 THVI--NGKQVEIKRTIPK 96 >ref|XP_003542187.1| PREDICTED: DAZ-associated protein 1-like [Glycine max] Length = 352 Score = 265 bits (677), Expect = 2e-68 Identities = 137/201 (68%), Positives = 151/201 (75%) Frame = -1 Query: 1420 EKYGGITDSVIMKDRYTGHPRGFGFITYADPSVVDIVIEETHVINGKXXXXXXXXXXXXX 1241 EKYG ITDSVIMKDR+TG PRGFGFITYADPSVVD VI+E HV+N Sbjct: 39 EKYGEITDSVIMKDRHTGRPRGFGFITYADPSVVDQVIQENHVVN--------------- 83 Query: 1240 XXXXXXXXXXXXXXXXXXVINGKQVEIKRTIPKGSSQSKDFKTKKIFVGGVPTTVTEDEF 1061 GKQVEIKRTIPKGSSQ+ DFKTKKIFVGG+PT+V+EDE Sbjct: 84 ---------------------GKQVEIKRTIPKGSSQANDFKTKKIFVGGIPTSVSEDEL 122 Query: 1060 KNFFSKYGNVVEHQIIRDHTTNRSRGFGFIVYDNEQVVDDILVNGNMIDMDGTQVEIKKA 881 KNFFSKYG VVEH+IIRDHTT RSRGFGFIV+D+E+VVD+IL +GNMIDM GTQVEIKKA Sbjct: 123 KNFFSKYGKVVEHEIIRDHTTKRSRGFGFIVFDSEKVVDNILADGNMIDMGGTQVEIKKA 182 Query: 880 EPKKTSNPPSAPAFASDSRVR 818 EPKK+SNP S P FASDSR R Sbjct: 183 EPKKSSNPASLPPFASDSRAR 203 Score = 71.6 bits (174), Expect = 5e-10 Identities = 34/82 (41%), Positives = 51/82 (62%) Frame = -1 Query: 1108 KIFVGGVPTTVTEDEFKNFFSKYGNVVEHQIIRDHTTNRSRGFGFIVYDNEQVVDDILVN 929 KIF+GG+ T + F +F KYG + + I++D T R RGFGFI Y + VVD ++ Sbjct: 19 KIFIGGLAKDTTLETFVKYFEKYGEITDSVIMKDRHTGRPRGFGFITYADPSVVDQVIQE 78 Query: 928 GNMIDMDGTQVEIKKAEPKKTS 863 +++ +G QVEIK+ PK +S Sbjct: 79 NHVV--NGKQVEIKRTIPKGSS 98 >ref|XP_002522793.1| Heterogeneous nuclear ribonucleoprotein A1, putative [Ricinus communis] gi|223538031|gb|EEF39644.1| Heterogeneous nuclear ribonucleoprotein A1, putative [Ricinus communis] Length = 348 Score = 265 bits (677), Expect = 2e-68 Identities = 149/275 (54%), Positives = 166/275 (60%), Gaps = 1/275 (0%) Frame = -1 Query: 1417 KYGGITDSVIMKDRYTGHPRGFGFITYADPSVVDIVIEETHVINGKXXXXXXXXXXXXXX 1238 +YG ITDSVIMKDRYTG PRGFGFITYADPSVVD VIE+THVI+G Sbjct: 41 RYGEITDSVIMKDRYTGQPRGFGFITYADPSVVDKVIEDTHVIHG--------------- 85 Query: 1237 XXXXXXXXXXXXXXXXXVINGKQVEIKRTIPKGSSQSKDFKTKKIFVGGVPTTVTEDEFK 1058 KQVEIKRTIPKGS QSKDFKTKKIFVGG+P++VTEDEFK Sbjct: 86 ---------------------KQVEIKRTIPKGSGQSKDFKTKKIFVGGIPSSVTEDEFK 124 Query: 1057 NFFSKYGNVVEHQIIRDHTTNRSRGFGFIVYDNEQVVDDILVNGNMIDMDGTQVEIKKAE 878 FFSKYG VVEHQIIRDH TNRSRGFGFI++D+E+ VD++L NGNMIDM GTQVEIKKAE Sbjct: 125 GFFSKYGQVVEHQIIRDHETNRSRGFGFIIFDSEETVDEMLSNGNMIDMAGTQVEIKKAE 184 Query: 877 PKKTSNPPSAPAFASDSRVRPLXXXXXXXXXXXXXXXXXXXXXXYRTP-XXXXXXXXXXX 701 PKK SNPP AP++ S+SR R YRTP Sbjct: 185 PKKASNPPPAPSYGSNSRGRSYNDSYGGFGGSYGGFDGGFGPGPYRTPGSLGGRLSSAYG 244 Query: 700 XXXXXXXXXXXXXXXXXXGIDNYQGESPLGYSSRF 596 + Y+GES LGYS RF Sbjct: 245 YGSGGGDFGGSYGSFGGSSLGGYRGESSLGYSGRF 279 Score = 64.7 bits (156), Expect = 6e-08 Identities = 32/79 (40%), Positives = 47/79 (59%) Frame = -1 Query: 1108 KIFVGGVPTTVTEDEFKNFFSKYGNVVEHQIIRDHTTNRSRGFGFIVYDNEQVVDDILVN 929 KIF+GG+ T F F +YG + + I++D T + RGFGFI Y + VVD ++ + Sbjct: 20 KIFIGGLAKDTTYATFNKHFGRYGEITDSVIMKDRYTGQPRGFGFITYADPSVVDKVIED 79 Query: 928 GNMIDMDGTQVEIKKAEPK 872 ++I G QVEIK+ PK Sbjct: 80 THVI--HGKQVEIKRTIPK 96