BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00011789
         (1420 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271592.1| PREDICTED: heterogeneous nuclear ribonucleop...   275   2e-71
emb|CBI39777.3| unnamed protein product [Vitis vinifera]              271   2e-70
ref|XP_004149406.1| PREDICTED: nuclear polyadenylated RNA-bindin...   268   3e-69
ref|XP_003542187.1| PREDICTED: DAZ-associated protein 1-like [Gl...   265   2e-68
ref|XP_002522793.1| Heterogeneous nuclear ribonucleoprotein A1, ...   265   2e-68

>ref|XP_002271592.1| PREDICTED: heterogeneous nuclear ribonucleoprotein 27C [Vitis
            vinifera] gi|147768836|emb|CAN78130.1| hypothetical
            protein VITISV_036088 [Vitis vinifera]
          Length = 348

 Score =  275 bits (704), Expect = 2e-71
 Identities = 155/275 (56%), Positives = 168/275 (61%), Gaps = 1/275 (0%)
 Frame = -1

Query: 1417 KYGGITDSVIMKDRYTGHPRGFGFITYADPSVVDIVIEETHVINGKXXXXXXXXXXXXXX 1238
            KYG ITDSVIMKDRYTG PRGFGFITYADPSVVD VIE+THVIN                
Sbjct: 41   KYGDITDSVIMKDRYTGQPRGFGFITYADPSVVDRVIEDTHVIN---------------- 84

Query: 1237 XXXXXXXXXXXXXXXXXVINGKQVEIKRTIPKGSSQSKDFKTKKIFVGGVPTTVTEDEFK 1058
                                GKQVEIKRTIPKGS QSKDFKTKKIFVGGVP+TVTEDEFK
Sbjct: 85   --------------------GKQVEIKRTIPKGSGQSKDFKTKKIFVGGVPSTVTEDEFK 124

Query: 1057 NFFSKYGNVVEHQIIRDHTTNRSRGFGFIVYDNEQVVDDILVNGNMIDMDGTQVEIKKAE 878
            NFFSKYG VVEHQIIRDH TNRSRGFGFI++D+E+VVD+++  GNMIDM GTQVEIKKAE
Sbjct: 125  NFFSKYGKVVEHQIIRDHETNRSRGFGFIIFDSEEVVDEMISKGNMIDMAGTQVEIKKAE 184

Query: 877  PKKTSNPPSAPAFASDSRVRPLXXXXXXXXXXXXXXXXXXXXXXYRTP-XXXXXXXXXXX 701
            PKK SNPP APA+ S+SR R                        YRTP            
Sbjct: 185  PKKASNPPPAPAYGSNSRARSFSDGFGGFGSSYGGFDSGFGPGPYRTPGGVGGRLGGYGG 244

Query: 700  XXXXXXXXXXXXXXXXXXGIDNYQGESPLGYSSRF 596
                               +  Y+GES LGYSSRF
Sbjct: 245  YGSSGSEFGGGYGGFGSSSLGGYRGESSLGYSSRF 279



 Score = 66.6 bits (161), Expect = 1e-08
 Identities = 33/79 (41%), Positives = 49/79 (62%)
 Frame = -1

Query: 1108 KIFVGGVPTTVTEDEFKNFFSKYGNVVEHQIIRDHTTNRSRGFGFIVYDNEQVVDDILVN 929
            KIF+GG+    T   F   F KYG++ +  I++D  T + RGFGFI Y +  VVD ++ +
Sbjct: 20   KIFIGGLAKDTTYATFNKHFGKYGDITDSVIMKDRYTGQPRGFGFITYADPSVVDRVIED 79

Query: 928  GNMIDMDGTQVEIKKAEPK 872
             ++I  +G QVEIK+  PK
Sbjct: 80   THVI--NGKQVEIKRTIPK 96


>emb|CBI39777.3| unnamed protein product [Vitis vinifera]
          Length = 293

 Score =  271 bits (694), Expect = 2e-70
 Identities = 140/200 (70%), Positives = 151/200 (75%)
 Frame = -1

Query: 1417 KYGGITDSVIMKDRYTGHPRGFGFITYADPSVVDIVIEETHVINGKXXXXXXXXXXXXXX 1238
            KYG ITDSVIMKDRYTG PRGFGFITYADPSVVD VIE+THVIN                
Sbjct: 41   KYGDITDSVIMKDRYTGQPRGFGFITYADPSVVDRVIEDTHVIN---------------- 84

Query: 1237 XXXXXXXXXXXXXXXXXVINGKQVEIKRTIPKGSSQSKDFKTKKIFVGGVPTTVTEDEFK 1058
                                GKQVEIKRTIPKGS QSKDFKTKKIFVGGVP+TVTEDEFK
Sbjct: 85   --------------------GKQVEIKRTIPKGSGQSKDFKTKKIFVGGVPSTVTEDEFK 124

Query: 1057 NFFSKYGNVVEHQIIRDHTTNRSRGFGFIVYDNEQVVDDILVNGNMIDMDGTQVEIKKAE 878
            NFFSKYG VVEHQIIRDH TNRSRGFGFI++D+E+VVD+++  GNMIDM GTQVEIKKAE
Sbjct: 125  NFFSKYGKVVEHQIIRDHETNRSRGFGFIIFDSEEVVDEMISKGNMIDMAGTQVEIKKAE 184

Query: 877  PKKTSNPPSAPAFASDSRVR 818
            PKK SNPP APA+ S+SR R
Sbjct: 185  PKKASNPPPAPAYGSNSRAR 204



 Score = 66.6 bits (161), Expect = 1e-08
 Identities = 33/79 (41%), Positives = 49/79 (62%)
 Frame = -1

Query: 1108 KIFVGGVPTTVTEDEFKNFFSKYGNVVEHQIIRDHTTNRSRGFGFIVYDNEQVVDDILVN 929
            KIF+GG+    T   F   F KYG++ +  I++D  T + RGFGFI Y +  VVD ++ +
Sbjct: 20   KIFIGGLAKDTTYATFNKHFGKYGDITDSVIMKDRYTGQPRGFGFITYADPSVVDRVIED 79

Query: 928  GNMIDMDGTQVEIKKAEPK 872
             ++I  +G QVEIK+  PK
Sbjct: 80   THVI--NGKQVEIKRTIPK 96


>ref|XP_004149406.1| PREDICTED: nuclear polyadenylated RNA-binding protein 4-like [Cucumis
            sativus] gi|449496860|ref|XP_004160246.1| PREDICTED:
            nuclear polyadenylated RNA-binding protein 4-like
            [Cucumis sativus]
          Length = 347

 Score =  268 bits (685), Expect = 3e-69
 Identities = 148/273 (54%), Positives = 164/273 (60%)
 Frame = -1

Query: 1414 YGGITDSVIMKDRYTGHPRGFGFITYADPSVVDIVIEETHVINGKXXXXXXXXXXXXXXX 1235
            YG ITDSVIMKDRYTG PRGFGFITYADPSVVD VIE+THVIN                 
Sbjct: 42   YGEITDSVIMKDRYTGQPRGFGFITYADPSVVDKVIEDTHVIN----------------- 84

Query: 1234 XXXXXXXXXXXXXXXXVINGKQVEIKRTIPKGSSQSKDFKTKKIFVGGVPTTVTEDEFKN 1055
                               GKQVEIKRTIPKG  QSKDFKTKKIFVGG+P+TVTEDEFK+
Sbjct: 85   -------------------GKQVEIKRTIPKGQGQSKDFKTKKIFVGGIPSTVTEDEFKH 125

Query: 1054 FFSKYGNVVEHQIIRDHTTNRSRGFGFIVYDNEQVVDDILVNGNMIDMDGTQVEIKKAEP 875
            FFSKYG +VEHQIIRDH TNRSRGFGFIV++ E+VVD+IL  GNMIDM GTQVEIKKAEP
Sbjct: 126  FFSKYGKIVEHQIIRDHETNRSRGFGFIVFEEEEVVDEILSKGNMIDMSGTQVEIKKAEP 185

Query: 874  KKTSNPPSAPAFASDSRVRPLXXXXXXXXXXXXXXXXXXXXXXYRTPXXXXXXXXXXXXX 695
            KK+SNP  APA+ S+SR R                        +R P             
Sbjct: 186  KKSSNPLPAPAYGSNSRARTFNDGFGGYGGSYGDFDAGFGPGPFRNPGGIGGRIGSGYGY 245

Query: 694  XXXXXXXXXXXXXXXXGIDNYQGESPLGYSSRF 596
                             +  Y+G+S LGYSSRF
Sbjct: 246  GSGGDFGGGYGGFGGNSLGGYRGDSSLGYSSRF 278



 Score = 66.2 bits (160), Expect = 2e-08
 Identities = 32/79 (40%), Positives = 48/79 (60%)
 Frame = -1

Query: 1108 KIFVGGVPTTVTEDEFKNFFSKYGNVVEHQIIRDHTTNRSRGFGFIVYDNEQVVDDILVN 929
            KIF+GG+    T  +F   F  YG + +  I++D  T + RGFGFI Y +  VVD ++ +
Sbjct: 20   KIFIGGLAKDTTYTQFNKHFGNYGEITDSVIMKDRYTGQPRGFGFITYADPSVVDKVIED 79

Query: 928  GNMIDMDGTQVEIKKAEPK 872
             ++I  +G QVEIK+  PK
Sbjct: 80   THVI--NGKQVEIKRTIPK 96


>ref|XP_003542187.1| PREDICTED: DAZ-associated protein 1-like [Glycine max]
          Length = 352

 Score =  265 bits (677), Expect = 2e-68
 Identities = 137/201 (68%), Positives = 151/201 (75%)
 Frame = -1

Query: 1420 EKYGGITDSVIMKDRYTGHPRGFGFITYADPSVVDIVIEETHVINGKXXXXXXXXXXXXX 1241
            EKYG ITDSVIMKDR+TG PRGFGFITYADPSVVD VI+E HV+N               
Sbjct: 39   EKYGEITDSVIMKDRHTGRPRGFGFITYADPSVVDQVIQENHVVN--------------- 83

Query: 1240 XXXXXXXXXXXXXXXXXXVINGKQVEIKRTIPKGSSQSKDFKTKKIFVGGVPTTVTEDEF 1061
                                 GKQVEIKRTIPKGSSQ+ DFKTKKIFVGG+PT+V+EDE 
Sbjct: 84   ---------------------GKQVEIKRTIPKGSSQANDFKTKKIFVGGIPTSVSEDEL 122

Query: 1060 KNFFSKYGNVVEHQIIRDHTTNRSRGFGFIVYDNEQVVDDILVNGNMIDMDGTQVEIKKA 881
            KNFFSKYG VVEH+IIRDHTT RSRGFGFIV+D+E+VVD+IL +GNMIDM GTQVEIKKA
Sbjct: 123  KNFFSKYGKVVEHEIIRDHTTKRSRGFGFIVFDSEKVVDNILADGNMIDMGGTQVEIKKA 182

Query: 880  EPKKTSNPPSAPAFASDSRVR 818
            EPKK+SNP S P FASDSR R
Sbjct: 183  EPKKSSNPASLPPFASDSRAR 203



 Score = 71.6 bits (174), Expect = 5e-10
 Identities = 34/82 (41%), Positives = 51/82 (62%)
 Frame = -1

Query: 1108 KIFVGGVPTTVTEDEFKNFFSKYGNVVEHQIIRDHTTNRSRGFGFIVYDNEQVVDDILVN 929
            KIF+GG+    T + F  +F KYG + +  I++D  T R RGFGFI Y +  VVD ++  
Sbjct: 19   KIFIGGLAKDTTLETFVKYFEKYGEITDSVIMKDRHTGRPRGFGFITYADPSVVDQVIQE 78

Query: 928  GNMIDMDGTQVEIKKAEPKKTS 863
             +++  +G QVEIK+  PK +S
Sbjct: 79   NHVV--NGKQVEIKRTIPKGSS 98


>ref|XP_002522793.1| Heterogeneous nuclear ribonucleoprotein A1, putative [Ricinus
            communis] gi|223538031|gb|EEF39644.1| Heterogeneous
            nuclear ribonucleoprotein A1, putative [Ricinus communis]
          Length = 348

 Score =  265 bits (677), Expect = 2e-68
 Identities = 149/275 (54%), Positives = 166/275 (60%), Gaps = 1/275 (0%)
 Frame = -1

Query: 1417 KYGGITDSVIMKDRYTGHPRGFGFITYADPSVVDIVIEETHVINGKXXXXXXXXXXXXXX 1238
            +YG ITDSVIMKDRYTG PRGFGFITYADPSVVD VIE+THVI+G               
Sbjct: 41   RYGEITDSVIMKDRYTGQPRGFGFITYADPSVVDKVIEDTHVIHG--------------- 85

Query: 1237 XXXXXXXXXXXXXXXXXVINGKQVEIKRTIPKGSSQSKDFKTKKIFVGGVPTTVTEDEFK 1058
                                 KQVEIKRTIPKGS QSKDFKTKKIFVGG+P++VTEDEFK
Sbjct: 86   ---------------------KQVEIKRTIPKGSGQSKDFKTKKIFVGGIPSSVTEDEFK 124

Query: 1057 NFFSKYGNVVEHQIIRDHTTNRSRGFGFIVYDNEQVVDDILVNGNMIDMDGTQVEIKKAE 878
             FFSKYG VVEHQIIRDH TNRSRGFGFI++D+E+ VD++L NGNMIDM GTQVEIKKAE
Sbjct: 125  GFFSKYGQVVEHQIIRDHETNRSRGFGFIIFDSEETVDEMLSNGNMIDMAGTQVEIKKAE 184

Query: 877  PKKTSNPPSAPAFASDSRVRPLXXXXXXXXXXXXXXXXXXXXXXYRTP-XXXXXXXXXXX 701
            PKK SNPP AP++ S+SR R                        YRTP            
Sbjct: 185  PKKASNPPPAPSYGSNSRGRSYNDSYGGFGGSYGGFDGGFGPGPYRTPGSLGGRLSSAYG 244

Query: 700  XXXXXXXXXXXXXXXXXXGIDNYQGESPLGYSSRF 596
                               +  Y+GES LGYS RF
Sbjct: 245  YGSGGGDFGGSYGSFGGSSLGGYRGESSLGYSGRF 279



 Score = 64.7 bits (156), Expect = 6e-08
 Identities = 32/79 (40%), Positives = 47/79 (59%)
 Frame = -1

Query: 1108 KIFVGGVPTTVTEDEFKNFFSKYGNVVEHQIIRDHTTNRSRGFGFIVYDNEQVVDDILVN 929
            KIF+GG+    T   F   F +YG + +  I++D  T + RGFGFI Y +  VVD ++ +
Sbjct: 20   KIFIGGLAKDTTYATFNKHFGRYGEITDSVIMKDRYTGQPRGFGFITYADPSVVDKVIED 79

Query: 928  GNMIDMDGTQVEIKKAEPK 872
             ++I   G QVEIK+  PK
Sbjct: 80   THVI--HGKQVEIKRTIPK 96