BLASTX nr result
ID: Coptis24_contig00011782
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00011782 (645 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|ABR26216.1| vacuolar protein sorting 55 containing protein [O... 233 3e-59 ref|NP_001148815.1| LOC100282432 [Zea mays] gi|195618340|gb|ACG3... 231 7e-59 gb|ACF83201.1| unknown [Zea mays] 229 3e-58 gb|ABK93704.1| unknown [Populus trichocarpa] 228 7e-58 ref|XP_002884851.1| predicted protein [Arabidopsis lyrata subsp.... 226 4e-57 >gb|ABR26216.1| vacuolar protein sorting 55 containing protein [Oryza sativa Indica Group] Length = 126 Score = 233 bits (593), Expect = 3e-59 Identities = 109/126 (86%), Positives = 119/126 (94%) Frame = +1 Query: 76 MTMSLGVLAGLAFMFSSSILLQILACALYNNWWPMITTLMYVMVPMPCLFFGGGSTHFLT 255 M M++ VLAGLAFMFS+SILLQILACALYNNWWPM+ LMYV+VPMPCLFFGGGST FLT Sbjct: 1 MAMTVEVLAGLAFMFSTSILLQILACALYNNWWPMLAALMYVLVPMPCLFFGGGSTQFLT 60 Query: 256 SRDGGGWIDAAKFLTGASAVGSIAIPAILRHANLIESGAMFIEFTSFFILVCTVMCFHRA 435 SRDGGGW +AAKFLTGASA+GSIAIPAILRHA LIE+GAMFIEFTSFFILVCTVMCFHRA Sbjct: 61 SRDGGGWFNAAKFLTGASAMGSIAIPAILRHAGLIETGAMFIEFTSFFILVCTVMCFHRA 120 Query: 436 TLEDDW 453 TL++DW Sbjct: 121 TLDEDW 126 >ref|NP_001148815.1| LOC100282432 [Zea mays] gi|195618340|gb|ACG31000.1| vacuolar protein sorting 55 containing protein [Zea mays] gi|195622332|gb|ACG32996.1| vacuolar protein sorting 55 containing protein [Zea mays] Length = 126 Score = 231 bits (590), Expect = 7e-59 Identities = 107/126 (84%), Positives = 120/126 (95%) Frame = +1 Query: 76 MTMSLGVLAGLAFMFSSSILLQILACALYNNWWPMITTLMYVMVPMPCLFFGGGSTHFLT 255 M M++ VLA LAFMFS+SILLQILACALYNNWWPM+ LMYV+VPMPCLFFGGGSTHFLT Sbjct: 1 MAMTVEVLAALAFMFSTSILLQILACALYNNWWPMLAALMYVLVPMPCLFFGGGSTHFLT 60 Query: 256 SRDGGGWIDAAKFLTGASAVGSIAIPAILRHANLIESGAMFIEFTSFFILVCTVMCFHRA 435 SR+GGGWI+AAKFLTGASA+GS+AIPAILRHA LIE+GAMFIEFTSFFILVCTV+CFHRA Sbjct: 61 SREGGGWINAAKFLTGASAMGSLAIPAILRHAGLIETGAMFIEFTSFFILVCTVLCFHRA 120 Query: 436 TLEDDW 453 TL++DW Sbjct: 121 TLDEDW 126 >gb|ACF83201.1| unknown [Zea mays] Length = 126 Score = 229 bits (585), Expect = 3e-58 Identities = 106/126 (84%), Positives = 120/126 (95%) Frame = +1 Query: 76 MTMSLGVLAGLAFMFSSSILLQILACALYNNWWPMITTLMYVMVPMPCLFFGGGSTHFLT 255 M M++ VLA LAFMFS+SILLQILACALY+NWWPM+ LMYV+VPMPCLFFGGGSTHFLT Sbjct: 1 MAMTVEVLAALAFMFSTSILLQILACALYSNWWPMLAALMYVLVPMPCLFFGGGSTHFLT 60 Query: 256 SRDGGGWIDAAKFLTGASAVGSIAIPAILRHANLIESGAMFIEFTSFFILVCTVMCFHRA 435 SR+GGGWI+AAKFLTGASA+GS+AIPAILRHA LIE+GAMFIEFTSFFILVCTV+CFHRA Sbjct: 61 SREGGGWINAAKFLTGASAMGSLAIPAILRHAGLIETGAMFIEFTSFFILVCTVLCFHRA 120 Query: 436 TLEDDW 453 TL++DW Sbjct: 121 TLDEDW 126 >gb|ABK93704.1| unknown [Populus trichocarpa] Length = 126 Score = 228 bits (581), Expect = 7e-58 Identities = 106/126 (84%), Positives = 119/126 (94%) Frame = +1 Query: 76 MTMSLGVLAGLAFMFSSSILLQILACALYNNWWPMITTLMYVMVPMPCLFFGGGSTHFLT 255 M M++ VLAGLAFMFS+SILLQILACA+YNNWWPM++ LMYV+VPMPCLFFGGGST FLT Sbjct: 1 MAMTVEVLAGLAFMFSASILLQILACAIYNNWWPMLSALMYVLVPMPCLFFGGGSTQFLT 60 Query: 256 SRDGGGWIDAAKFLTGASAVGSIAIPAILRHANLIESGAMFIEFTSFFILVCTVMCFHRA 435 SRDGGGWIDAAKFLTGASAVGSIAIP ILRHA++IE+GAM+IEFTSF I VCTVMCFHRA Sbjct: 61 SRDGGGWIDAAKFLTGASAVGSIAIPIILRHAHMIETGAMWIEFTSFVIFVCTVMCFHRA 120 Query: 436 TLEDDW 453 +LED+W Sbjct: 121 SLEDEW 126 >ref|XP_002884851.1| predicted protein [Arabidopsis lyrata subsp. lyrata] gi|297330691|gb|EFH61110.1| predicted protein [Arabidopsis lyrata subsp. lyrata] Length = 126 Score = 226 bits (575), Expect = 4e-57 Identities = 103/126 (81%), Positives = 116/126 (92%) Frame = +1 Query: 76 MTMSLGVLAGLAFMFSSSILLQILACALYNNWWPMITTLMYVMVPMPCLFFGGGSTHFLT 255 M M++ VLAGLAFMFSSSILLQILACA+Y NWWPM++ LMYV+VPMPC+FFGGGST FLT Sbjct: 1 MAMTIEVLAGLAFMFSSSILLQILACAIYGNWWPMLSALMYVVVPMPCMFFGGGSTQFLT 60 Query: 256 SRDGGGWIDAAKFLTGASAVGSIAIPAILRHANLIESGAMFIEFTSFFILVCTVMCFHRA 435 SRDGGGWIDAAKFLTGAS VGS+AIP ILRHA +IE+GAM IEFTSFFI +CTVMCFHRA Sbjct: 61 SRDGGGWIDAAKFLTGASTVGSLAIPIILRHAQMIETGAMLIEFTSFFIFICTVMCFHRA 120 Query: 436 TLEDDW 453 +L+DDW Sbjct: 121 SLDDDW 126