BLASTX nr result

ID: Coptis24_contig00011772 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00011772
         (1178 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002520211.1| Metalloendoproteinase 1 precursor, putative ...   437   e-120
gb|ABF58910.1| matrix metalloprotease 1 [Nicotiana tabacum]           414   e-113
gb|ADD21635.1| matrix metalloprotease 1 [Nicotiana benthamiana]       412   e-113
emb|CCH68442.1| matrix metalloproteinase precursor [Solanum lyco...   412   e-112
emb|CAN76268.1| hypothetical protein VITISV_004096 [Vitis vinifera]   412   e-112

>ref|XP_002520211.1| Metalloendoproteinase 1 precursor, putative [Ricinus communis]
            gi|223540703|gb|EEF42266.1| Metalloendoproteinase 1
            precursor, putative [Ricinus communis]
          Length = 364

 Score =  437 bits (1125), Expect = e-120
 Identities = 210/309 (67%), Positives = 251/309 (81%), Gaps = 1/309 (0%)
 Frame = -3

Query: 1065 LPNITFPTSWDSFKNLSGCQIGDKVDGLAKIKKYFHQFGYIPDSINNFTDDFDDSLELAL 886
            LPNIT PT WDSFK L+GC+ GDK++GL+K+K YFH FGYIP++++NFTDDFDD+LE A+
Sbjct: 36   LPNITSPT-WDSFKRLAGCRAGDKLEGLSKLKNYFHYFGYIPNTLSNFTDDFDDALESAI 94

Query: 885  KTYQLNFNLNGTGILDSSTLQQIVQPRCGVADIINGTSTMKSGTEMKNANSVNLHSVAHF 706
            KTYQ NFNLN TG LD  TL Q+V+PRCG ADIING++TM SG       S   H+V H+
Sbjct: 95   KTYQQNFNLNVTGELDEQTLDQLVRPRCGNADIINGSTTMNSGKWQTTTTS--FHAVGHY 152

Query: 705  SFFPNRPRWPSWNQDLTYAFEPENQLTDSVKAVFARAFAKWSKVTPLTFNETQNYNRADI 526
            SFFP  PRWP   +DLTYAF P NQLT+  K+VF RAF +WS V P+ F ET++YN ADI
Sbjct: 153  SFFPGTPRWPDSKRDLTYAFWPSNQLTEVEKSVFTRAFDRWSTVIPMNFTETESYNVADI 212

Query: 525  TIGFFAGNHGDGEPFDGVLGTLAHAFSPPDGRLHLDGAESWVADGDVSTSGSNGAIDLES 346
             IGFF+G+HGDGEPFDGVLGTLAHAFSPP GR HLDG E+WV  GD+S+S  + A+DLES
Sbjct: 213  RIGFFSGDHGDGEPFDGVLGTLAHAFSPPSGRFHLDGEENWVVSGDISSSTISSAVDLES 272

Query: 345  VAVHEIGHLLGLGHSSVQEAIMFPTISTGIKKIELANDDVVGIQTLYGSNPNFNGSNAS- 169
            VAVHEIGHLLGLGHSSV+EAIM+PTI +  +KIELANDD+ GIQ LYGSNPNFNGS++S 
Sbjct: 273  VAVHEIGHLLGLGHSSVEEAIMYPTIPSRTRKIELANDDIQGIQYLYGSNPNFNGSSSST 332

Query: 168  PSNQERDTN 142
            PS QER+T+
Sbjct: 333  PSIQERETS 341


>gb|ABF58910.1| matrix metalloprotease 1 [Nicotiana tabacum]
          Length = 365

 Score =  414 bits (1063), Expect = e-113
 Identities = 198/306 (64%), Positives = 241/306 (78%), Gaps = 5/306 (1%)
 Frame = -3

Query: 1044 TSWDSFKNLSGCQIGDKVDGLAKIKKYFHQFGYIPDSINNFTDDFDDSLELALKTYQLNF 865
            T+WD+F  L GC  G KVDGLAKIKKYF+ FGYIP S++NFTDDFDD+LE ALKTYQ NF
Sbjct: 39   TAWDAFHKLLGCHAGQKVDGLAKIKKYFYNFGYIP-SLSNFTDDFDDALESALKTYQQNF 97

Query: 864  NLNGTGILDSSTLQQIVQPRCGVADIINGTSTMKSGTEMKNANSVNLHSVAHFSFFPNRP 685
            NLN TG+LD+ T+Q +++PRCG AD++NGTSTM SG     A S N+H+VAHFSFFP RP
Sbjct: 98   NLNTTGVLDAPTIQHLIRPRCGNADVVNGTSTMNSGKPP--AGSQNMHTVAHFSFFPGRP 155

Query: 684  RWPSWNQDLTYAFEPENQLTDSVKAVFARAFAKWSKVTPLTFNETQNYNRADITIGFFAG 505
            RWP    DLTYAF P+N LTD++K+VF+RAF +WS+VTPL+F ET ++  ADI IGFFAG
Sbjct: 156  RWPDSKTDLTYAFLPQNGLTDNIKSVFSRAFDRWSEVTPLSFTETASFQSADIKIGFFAG 215

Query: 504  NHGDGEPFDGVLGTLAHAFSPPDGRLHLDGAESWVADGDVSTSGS----NGAIDLESVAV 337
            +H DGEPFDG +GTLAHAFSPP G  HLDG E+WV DG     G+      A+DLESVAV
Sbjct: 216  DHNDGEPFDGPMGTLAHAFSPPGGHFHLDGDENWVIDGVPIVEGNFFSILSAVDLESVAV 275

Query: 336  HEIGHLLGLGHSSVQEAIMFPTISTGIKKIELANDDVVGIQTLYGSNPNFNGSNASPS-N 160
            HEIGHLLGLGHSSV+++IMFP+++ G +++ELANDD+ G+Q LYGSNPNF G N   +  
Sbjct: 276  HEIGHLLGLGHSSVEDSIMFPSLAAGTRRVELANDDIQGVQVLYGSNPNFTGPNTVLNPT 335

Query: 159  QERDTN 142
            QE DTN
Sbjct: 336  QENDTN 341


>gb|ADD21635.1| matrix metalloprotease 1 [Nicotiana benthamiana]
          Length = 364

 Score =  412 bits (1059), Expect = e-113
 Identities = 197/307 (64%), Positives = 244/307 (79%), Gaps = 6/307 (1%)
 Frame = -3

Query: 1044 TSWDSFKNLSGCQIGDKVDGLAKIKKYFHQFGYIPDSINNFTDDFDDSLELALKTYQLNF 865
            T+WD+F  L GC  G KVDGLAKIKKYF+ FGYI  S++NFTDDFDD+LE ALKTYQ NF
Sbjct: 38   TAWDAFHKLLGCHAGQKVDGLAKIKKYFYNFGYI-SSLSNFTDDFDDALESALKTYQQNF 96

Query: 864  NLNGTGILDSSTLQQIVQPRCGVADIINGTSTMKSGTEMKNANSVNLHSVAHFSFFPNRP 685
            NLN TG+LD+ T++ +++PRCG AD++NGTSTM SG    +A S N+H+VAHFSFFP RP
Sbjct: 97   NLNTTGVLDAPTIEHLIRPRCGNADVVNGTSTMNSGKP--SAGSQNIHTVAHFSFFPGRP 154

Query: 684  RWPSWNQDLTYAFEPENQLTDSVKAVFARAFAKWSKVTPLTFNETQNYNRADITIGFFAG 505
            RWP  N+DLTYAF P+N LTD++K+VF+RAF +WS+VTPLTF E  ++  ADI IGFFAG
Sbjct: 155  RWPESNRDLTYAFLPQNGLTDNIKSVFSRAFDRWSEVTPLTFTEIASFQSADIKIGFFAG 214

Query: 504  NHGDGEPFDGVLGTLAHAFSPPDGRLHLDGAESWVADGDVSTSGS----NGAIDLESVAV 337
            +H DGEPFDG +GTLAHAFSPP G  HLDG E+WV DG     G+      A+DLESVAV
Sbjct: 215  DHNDGEPFDGPMGTLAHAFSPPGGHFHLDGDENWVIDGAPIVEGNFFSILSAVDLESVAV 274

Query: 336  HEIGHLLGLGHSSVQEAIMFPTISTGIKKIELANDDVVGIQTLYGSNPNFNGSNA--SPS 163
            HEIGHLLGLGHSSV+++IMFP+++ G +++ELANDD+ G+Q LYGSNPNF G N   +P+
Sbjct: 275  HEIGHLLGLGHSSVEDSIMFPSLAAGTRRVELANDDIQGVQVLYGSNPNFTGPNTVLTPT 334

Query: 162  NQERDTN 142
            + E DTN
Sbjct: 335  H-ENDTN 340


>emb|CCH68442.1| matrix metalloproteinase precursor [Solanum lycopersicum]
          Length = 367

 Score =  412 bits (1058), Expect = e-112
 Identities = 197/314 (62%), Positives = 240/314 (76%), Gaps = 7/314 (2%)
 Frame = -3

Query: 1062 PNITFP--TSWDSFKNLSGCQIGDKVDGLAKIKKYFHQFGYIPDSINNFTDDFDDSLELA 889
            PN+  P  T+WD+F  L GC  G  VDGLAKIKKYFH FGYI +S  NFTDDFDD+LE A
Sbjct: 32   PNLLKPNATAWDAFNKLLGCHSGQTVDGLAKIKKYFHYFGYINNSSTNFTDDFDDTLESA 91

Query: 888  LKTYQLNFNLNGTGILDSSTLQQIVQPRCGVADIINGTSTMKSGTEMKNANSVNLHSVAH 709
            LKTYQLNFNLN TG+LD++T+Q +++PRCG AD++NGTSTM SG     A S  +H+VAH
Sbjct: 92   LKTYQLNFNLNTTGVLDANTIQHLIKPRCGNADVVNGTSTMNSGKPP--AGSPTMHTVAH 149

Query: 708  FSFFPNRPRWPSWNQDLTYAFEPENQLTDSVKAVFARAFAKWSKVTPLTFNETQNYNRAD 529
            +SFFP  PRWP+  +DLTYAF P+N LTD +K VF RAF +WS+VTPLTF E  +Y  AD
Sbjct: 150  YSFFPGSPRWPANKRDLTYAFAPQNGLTDDIKIVFTRAFDRWSEVTPLTFTEIASYQSAD 209

Query: 528  ITIGFFAGNHGDGEPFDGVLGTLAHAFSPPDGRLHLDGAESWVADGDVSTSGS----NGA 361
            I IGFF+G+H DGEPFDG +GTLAHAFSPP G  HLDG E+WV DG     G+      A
Sbjct: 210  IKIGFFSGDHNDGEPFDGPMGTLAHAFSPPAGHFHLDGEENWVIDGAPIVDGNFFSILSA 269

Query: 360  IDLESVAVHEIGHLLGLGHSSVQEAIMFPTISTGIKKIELANDDVVGIQTLYGSNPNFNG 181
            +DLESVAVHEIGHLLGLGHSSV++AIM+PT+  G +++EL NDD++G+Q LYGSNPN+ G
Sbjct: 270  VDLESVAVHEIGHLLGLGHSSVEDAIMYPTLGAGTRRVELRNDDILGVQELYGSNPNYTG 329

Query: 180  SNAS-PSNQERDTN 142
             N +   +QE DTN
Sbjct: 330  PNPNLTPSQESDTN 343


>emb|CAN76268.1| hypothetical protein VITISV_004096 [Vitis vinifera]
          Length = 364

 Score =  412 bits (1058), Expect = e-112
 Identities = 198/310 (63%), Positives = 241/310 (77%)
 Frame = -3

Query: 1062 PNITFPTSWDSFKNLSGCQIGDKVDGLAKIKKYFHQFGYIPDSINNFTDDFDDSLELALK 883
            PN T  + WD+FK  +GC  GDK DGLAK+K+YFH FGYI +S  N+TDDFDD+ E ALK
Sbjct: 36   PNAT-TSGWDAFKKFAGCHAGDKADGLAKLKEYFHYFGYIHNS--NYTDDFDDAFEQALK 92

Query: 882  TYQLNFNLNGTGILDSSTLQQIVQPRCGVADIINGTSTMKSGTEMKNANSVNLHSVAHFS 703
            TYQLNFNLN TG LD +TL QIV PRCG ADI NG+S+M SG    + +  + H+V H+S
Sbjct: 93   TYQLNFNLNTTGQLDXATLNQIVSPRCGNADIENGSSSMNSGKSTPSTSG-HFHTVGHYS 151

Query: 702  FFPNRPRWPSWNQDLTYAFEPENQLTDSVKAVFARAFAKWSKVTPLTFNETQNYNRADIT 523
            FF  +P WP   ++LTY F P+NQL+D+VKAVF  AF +W+ VTPLTF E+ +Y  AD+ 
Sbjct: 152  FFDGKPVWPESKRNLTYGFLPDNQLSDTVKAVFTSAFERWAAVTPLTFTESDSYYSADLR 211

Query: 522  IGFFAGNHGDGEPFDGVLGTLAHAFSPPDGRLHLDGAESWVADGDVSTSGSNGAIDLESV 343
            I F+ G+HGDGE FDGVLGTLAHAFSP +GR HLDG E+WVA GDV+TS  + AIDLESV
Sbjct: 212  IAFYTGDHGDGEAFDGVLGTLAHAFSPTNGRFHLDGEENWVATGDVTTSSISSAIDLESV 271

Query: 342  AVHEIGHLLGLGHSSVQEAIMFPTISTGIKKIELANDDVVGIQTLYGSNPNFNGSNASPS 163
            AVHEIGHLLGLGHSSV+EAIM+PTI++  KK+ELA+DD+ GIQ LYGSNPN+NGS+ SPS
Sbjct: 272  AVHEIGHLLGLGHSSVEEAIMYPTITSRTKKVELASDDIQGIQELYGSNPNYNGSSTSPS 331

Query: 162  NQERDTNDGG 133
             +   TND G
Sbjct: 332  QESETTNDSG 341


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