BLASTX nr result
ID: Coptis24_contig00011762
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00011762 (809 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CAN67605.1| hypothetical protein VITISV_030993 [Vitis vinifera] 45 2e-09 ref|XP_002510608.1| conserved hypothetical protein [Ricinus comm... 45 1e-08 ref|XP_002300676.1| predicted protein [Populus trichocarpa] gi|2... 48 6e-08 ref|XP_002510609.1| conserved hypothetical protein [Ricinus comm... 43 2e-07 emb|CAN82650.1| hypothetical protein VITISV_024771 [Vitis vinifera] 57 4e-06 >emb|CAN67605.1| hypothetical protein VITISV_030993 [Vitis vinifera] Length = 1290 Score = 44.7 bits (104), Expect(2) = 2e-09 Identities = 19/37 (51%), Positives = 26/37 (70%) Frame = +1 Query: 457 TPMADWSGIPEELLSLICQRLDSFVDYLQFKVVCKPW 567 T MADWS +P++ L LI ++L S DY++F VCK W Sbjct: 917 TVMADWSKMPDDPLKLIAEKLHSVEDYVRFGGVCKSW 953 Score = 43.9 bits (102), Expect(2) = 2e-09 Identities = 20/47 (42%), Positives = 30/47 (63%) Frame = +2 Query: 668 KVYELDLPEIHQHRCVGAAGNWIVTVDMELDMHIFNLFSKVHMNLPS 808 KVYE+ LPE+ C G+ W+VT+ +LDM + N ++V + LPS Sbjct: 992 KVYEIRLPEVVGKWCWGSPYGWLVTIGTDLDMCLLNPLTRVQILLPS 1038 >ref|XP_002510608.1| conserved hypothetical protein [Ricinus communis] gi|223551309|gb|EEF52795.1| conserved hypothetical protein [Ricinus communis] Length = 406 Score = 45.1 bits (105), Expect(2) = 1e-08 Identities = 22/54 (40%), Positives = 32/54 (59%), Gaps = 3/54 (5%) Frame = +1 Query: 463 MADWSGIPEELLSLICQRLDSFVDYLQFKVVCKPWRCVSYNYP---LPQLPLLM 615 M++WS +P+ELL I Q+ ++VDY+ + VCK W P L QLP L+ Sbjct: 1 MSNWSELPQELLQTITQKQSNYVDYISTRAVCKSWWSAIPKKPHDLLCQLPWLL 54 Score = 40.4 bits (93), Expect(2) = 1e-08 Identities = 21/63 (33%), Positives = 31/63 (49%) Frame = +2 Query: 620 RSFLGLTKGGEEFDKTKVYELDLPEIHQHRCVGAAGNWIVTVDMELDMHIFNLFSKVHMN 799 R F L G K Y L+LPE + RC G++ W+V V+ + + N +K + Sbjct: 65 RGFYNLADG-------KTYHLELPETIEKRCCGSSHGWLVMVEDTPSIFLLNPLTKARIE 117 Query: 800 LPS 808 LPS Sbjct: 118 LPS 120 >ref|XP_002300676.1| predicted protein [Populus trichocarpa] gi|222842402|gb|EEE79949.1| predicted protein [Populus trichocarpa] Length = 305 Score = 47.8 bits (112), Expect(2) = 6e-08 Identities = 25/54 (46%), Positives = 32/54 (59%), Gaps = 3/54 (5%) Frame = +1 Query: 463 MADWSGIPEELLSLICQRLDSFVDYLQFKVVCKPWRCVSYNYP---LPQLPLLM 615 M+ WS +P ELL LI Q+ ++VDYL + VCK WR P L QLP L+ Sbjct: 1 MSRWSDLPPELLQLITQKQTNYVDYLCVRAVCKSWRSALPKKPHDLLCQLPWLL 54 Score = 35.4 bits (80), Expect(2) = 6e-08 Identities = 18/56 (32%), Positives = 27/56 (48%) Frame = +2 Query: 620 RSFLGLTKGGEEFDKTKVYELDLPEIHQHRCVGAAGNWIVTVDMELDMHIFNLFSK 787 R F L G K Y L+LPE ++ RC G++ W+V V+ + + N K Sbjct: 65 RGFYNLADG-------KTYRLELPEAYEKRCCGSSHGWLVMVEETPAIFLLNPLKK 113 >ref|XP_002510609.1| conserved hypothetical protein [Ricinus communis] gi|223551310|gb|EEF52796.1| conserved hypothetical protein [Ricinus communis] Length = 406 Score = 43.1 bits (100), Expect(2) = 2e-07 Identities = 16/35 (45%), Positives = 24/35 (68%) Frame = +1 Query: 463 MADWSGIPEELLSLICQRLDSFVDYLQFKVVCKPW 567 M+ WS +P+ELL I Q+ ++VDY+ + VCK W Sbjct: 1 MSSWSELPQELLQTITQKQTNYVDYISTRAVCKSW 35 Score = 38.5 bits (88), Expect(2) = 2e-07 Identities = 17/47 (36%), Positives = 26/47 (55%) Frame = +2 Query: 668 KVYELDLPEIHQHRCVGAAGNWIVTVDMELDMHIFNLFSKVHMNLPS 808 K Y L+LPE RC G++ W+V V+ + + N +K + LPS Sbjct: 74 KTYHLELPETVDKRCCGSSHGWLVMVEDTPSIFLLNPLTKSRIELPS 120 >emb|CAN82650.1| hypothetical protein VITISV_024771 [Vitis vinifera] Length = 320 Score = 57.4 bits (137), Expect = 4e-06 Identities = 49/148 (33%), Positives = 76/148 (51%), Gaps = 2/148 (1%) Frame = +3 Query: 6 MNLPSQSTFNTQIHDPTINQTRSRELMVSKVVLTYPKDPSE-DFIAVAIHTVLKKIAIAR 182 ++LP TF P +++T E ++KVVL+ PS + + +AIH+ KK+A + Sbjct: 123 IDLPPAITFEDS--PPDLDETPI-EFFLNKVVLSSTPSPSNANCVIMAIHSNYKKLAFCK 179 Query: 183 PGDKTWTTIQNIPC-VMDVIYFKQQLYGICANRKLYILDIKSNPPKASEVHVSFSLSLHG 359 PGDK W T+++ D++Y+K Y I K+ DI +P + F+L Sbjct: 180 PGDKRWITLKSEDIQYKDLLYYKDNFYAI-GRSKVVQCDIGDDPRV-----IPFALLPKM 233 Query: 360 CVFGGINRYLVEWSGELLQVLQHESPKE 443 F RYLVE SG LL VL++ K+ Sbjct: 234 GYFQ--YRYLVESSGCLLYVLRYMDLKD 259