BLASTX nr result

ID: Coptis24_contig00011760 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00011760
         (699 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268823.1| PREDICTED: probable LRR receptor-like serine...   159   5e-37
emb|CAN63094.1| hypothetical protein VITISV_020143 [Vitis vinifera]   159   7e-37
ref|XP_002526809.1| serine-threonine protein kinase, plant-type,...   148   9e-34
ref|XP_002274540.2| PREDICTED: probable LRR receptor-like serine...   145   1e-32
ref|XP_002526891.1| serine-threonine protein kinase, plant-type,...   143   3e-32

>ref|XP_002268823.1| PREDICTED: probable LRR receptor-like serine/threonine-protein
           kinase At3g47570 [Vitis vinifera]
          Length = 1009

 Score =  159 bits (402), Expect = 5e-37
 Identities = 91/204 (44%), Positives = 114/204 (55%), Gaps = 3/204 (1%)
 Frame = -1

Query: 606 FRQSYRLFCV--CMILIKSIKEGSAQVTPSSRNAADRFALLAFKSQVV-DPLGALVSWND 436
           F  S+ L+ V  C+ L + +   S Q      N  DR AL+AFK  +  DPLG L SWND
Sbjct: 4   FVSSFLLYTVLLCIHLWRPVTASSMQ------NETDRLALIAFKDGITQDPLGMLSSWND 57

Query: 435 SFHHCNWKGITCSLQDRDRVASLDLQSQKLEGTLSPYIGNLTFLTTLTLSQNNFRGEIPQ 256
           S H C W G+ CS +   RV  L+L S  L G+LSP+IGNLTFL T+ L  N+F G++P 
Sbjct: 58  SLHFCRWSGVYCSRRHVHRVTKLNLFSYGLVGSLSPHIGNLTFLRTIVLQNNSFHGKVPS 117

Query: 255 EIGXXXXXXXXXXXXXSFNGKIPVNLTQCSDLRVLNLIDNKFSGNXXXXXXXXXXXXXXX 76
           EIG             SF GK+P NLT CS+LRVLNLIDNK  G                
Sbjct: 118 EIGGLFRLQVLVLSNNSFEGKVPTNLTYCSELRVLNLIDNKLEGKIPEELGSLSKLKALG 177

Query: 75  XXLNDLSGYIPPSLGNISTLARLS 4
              N+L+G IP SLGN+S+L+  S
Sbjct: 178 LTRNNLTGKIPASLGNLSSLSLFS 201


>emb|CAN63094.1| hypothetical protein VITISV_020143 [Vitis vinifera]
          Length = 1009

 Score =  159 bits (401), Expect = 7e-37
 Identities = 92/204 (45%), Positives = 114/204 (55%), Gaps = 3/204 (1%)
 Frame = -1

Query: 606 FRQSYRLFCV--CMILIKSIKEGSAQVTPSSRNAADRFALLAFKSQVV-DPLGALVSWND 436
           F  S+ L+ V  C+ L + +   S Q      N  DR AL+AFK  +  DPLG L SWND
Sbjct: 4   FVSSFLLYTVLLCIHLWRPVTASSMQ------NETDRLALIAFKDGITQDPLGMLSSWND 57

Query: 435 SFHHCNWKGITCSLQDRDRVASLDLQSQKLEGTLSPYIGNLTFLTTLTLSQNNFRGEIPQ 256
           S H C W G+ CS +   RV  L+L S  L G+LSP+IGNLTFL T+ L  N+F G++P 
Sbjct: 58  SLHFCRWSGVYCSRRHVHRVTKLNLFSYGLVGSLSPHIGNLTFLRTIVLQNNSFHGKVPS 117

Query: 255 EIGXXXXXXXXXXXXXSFNGKIPVNLTQCSDLRVLNLIDNKFSGNXXXXXXXXXXXXXXX 76
           EIG             SF GK+P NLT CS+LRVLNLIDNK  G                
Sbjct: 118 EIGGLFRLQVLVLSNNSFEGKVPTNLTYCSELRVLNLIDNKLEGKIPEELGSLSKLKALG 177

Query: 75  XXLNDLSGYIPPSLGNISTLARLS 4
              N+L+G IP SLGN+S+L   S
Sbjct: 178 LXRNNLTGKIPASLGNLSSLTLFS 201


>ref|XP_002526809.1| serine-threonine protein kinase, plant-type, putative [Ricinus
           communis] gi|223533813|gb|EEF35544.1| serine-threonine
           protein kinase, plant-type, putative [Ricinus communis]
          Length = 923

 Score =  148 bits (374), Expect = 9e-34
 Identities = 77/171 (45%), Positives = 105/171 (61%), Gaps = 1/171 (0%)
 Frame = -1

Query: 516 NAADRFALLAFKSQVV-DPLGALVSWNDSFHHCNWKGITCSLQDRDRVASLDLQSQKLEG 340
           N  DR AL++F+  +V DP G L SWN+S H C+W G+TCS +  DR+ +L+L SQ L G
Sbjct: 29  NETDRLALISFRELIVRDPFGVLNSWNNSAHFCDWYGVTCSRRHPDRIIALNLTSQGLVG 88

Query: 339 TLSPYIGNLTFLTTLTLSQNNFRGEIPQEIGXXXXXXXXXXXXXSFNGKIPVNLTQCSDL 160
           +LSP+IGNL+FL  +    N+FRG+IP EIG             SF G IP NL+ CS+L
Sbjct: 89  SLSPHIGNLSFLRYVDFRNNSFRGQIPHEIGRLRRLQCLTLSNNSFCGNIPTNLSYCSNL 148

Query: 159 RVLNLIDNKFSGNXXXXXXXXXXXXXXXXXLNDLSGYIPPSLGNISTLARL 7
            +LN+IDNK  G+                  N+L+G IPPS+GN+S+L +L
Sbjct: 149 VILNIIDNKLVGSIPAELGSLRKLEALGLAKNNLTGSIPPSIGNLSSLWQL 199


>ref|XP_002274540.2| PREDICTED: probable LRR receptor-like serine/threonine-protein
           kinase At3g47570-like [Vitis vinifera]
          Length = 1040

 Score =  145 bits (365), Expect = 1e-32
 Identities = 81/178 (45%), Positives = 103/178 (57%), Gaps = 1/178 (0%)
 Frame = -1

Query: 534 VTPSSRNAADRFALLAFKSQVV-DPLGALVSWNDSFHHCNWKGITCSLQDRDRVASLDLQ 358
           V PS RN  DR ALLA K+Q+  DPLG   SWNDS H CNW G+TC  + + RV +L+L 
Sbjct: 31  VLPSHRNETDRLALLAIKAQITQDPLGITTSWNDSVHFCNWTGVTCGHRHQ-RVNTLNLN 89

Query: 357 SQKLEGTLSPYIGNLTFLTTLTLSQNNFRGEIPQEIGXXXXXXXXXXXXXSFNGKIPVNL 178
           S  L G+LSP IGNLTFLT L L  NNF G+IPQE+G             SF+G+IP NL
Sbjct: 90  SLHLVGSLSPSIGNLTFLTGLNLELNNFHGQIPQELGRLSRLRALNLTNNSFSGEIPANL 149

Query: 177 TQCSDLRVLNLIDNKFSGNXXXXXXXXXXXXXXXXXLNDLSGYIPPSLGNISTLARLS 4
           ++CS+L    L  N   G                   N+L+G +P SLGN++++  LS
Sbjct: 150 SRCSNLVYFRLGFNNLIGRIPSWLGSYPKVVRMQLHYNNLTGPVPDSLGNLTSIKSLS 207


>ref|XP_002526891.1| serine-threonine protein kinase, plant-type, putative [Ricinus
           communis] gi|223533790|gb|EEF35522.1| serine-threonine
           protein kinase, plant-type, putative [Ricinus communis]
          Length = 1013

 Score =  143 bits (361), Expect = 3e-32
 Identities = 75/174 (43%), Positives = 99/174 (56%), Gaps = 1/174 (0%)
 Frame = -1

Query: 519 RNAADRFALLAFKSQVV-DPLGALVSWNDSFHHCNWKGITCSLQDRDRVASLDLQSQKLE 343
           +N  D+ ALLAFK  +  DP GAL SWN S H+C W+GI+CS + R+RV  LDL SQ L 
Sbjct: 30  KNETDKMALLAFKGAITSDPNGALNSWNTSLHYCQWQGISCSSKHRERVTILDLSSQGLV 89

Query: 342 GTLSPYIGNLTFLTTLTLSQNNFRGEIPQEIGXXXXXXXXXXXXXSFNGKIPVNLTQCSD 163
           G +S +IGNL+FL  + L  N+F G+IP EIG             SF+G++P NL+ C  
Sbjct: 90  GPVSAHIGNLSFLRIIRLDNNSFHGKIPPEIGKLFRLRIFYLNNNSFHGEVPTNLSSCVS 149

Query: 162 LRVLNLIDNKFSGNXXXXXXXXXXXXXXXXXLNDLSGYIPPSLGNISTLARLSL 1
           LR +N IDN  +G                   N+    IPPS+GN S+L  +SL
Sbjct: 150 LREINFIDNNLAGKFPVELNSIPNLAALGLGQNNFKDNIPPSIGNFSSLILISL 203


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