BLASTX nr result

ID: Coptis24_contig00011755 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00011755
         (1369 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAJ34618.1| unnamed protein product [Thellungiella halophila]     365   2e-98
ref|XP_002524068.1| syntaxin, putative [Ricinus communis] gi|223...   361   2e-97
ref|XP_003519112.1| PREDICTED: syntaxin-121-like [Glycine max]        358   2e-96
ref|XP_002884867.1| SYP121 [Arabidopsis lyrata subsp. lyrata] gi...   358   2e-96
ref|XP_002263986.1| PREDICTED: syntaxin-121-like [Vitis vinifera]     357   4e-96

>dbj|BAJ34618.1| unnamed protein product [Thellungiella halophila]
          Length = 342

 Score =  365 bits (936), Expect = 2e-98
 Identities = 189/287 (65%), Positives = 222/287 (77%), Gaps = 5/287 (1%)
 Frame = -3

Query: 1106 MNDLFSGSFSRFKSEPNNSPDNYNPKGGVQM-----SAMGANLDKFFEDVEGIKDXXXXX 942
            MNDLFS SFSRF+SEP+   D     GGVQM     S  G NLDKFFEDVE +K+     
Sbjct: 1    MNDLFSSSFSRFRSEPSPRRDGAGGGGGVQMAHPAGSTGGVNLDKFFEDVESVKEELKEL 60

Query: 941  XXXXXXXXXXXXXLKTIHNAKSIKNLRSQMDSDISXXXXXXXLIKVRLEALDRSNASNRT 762
                          KT+HNAK++K+LRS+MD+D+        +IKV+LEALDRSNA+NR+
Sbjct: 61   DRLNETLQSCHEQSKTLHNAKAVKDLRSKMDADVGVALKKAKMIKVKLEALDRSNAANRS 120

Query: 761  QPGCGPGSSSDRTRTSVLNGLRKKLKDSMEGFNTLRQEIGSEYKETVKRRFFTITGESPD 582
             PGCGPGSSSDRTRTSVLNGLRKKLKDSM+ FN LR+ I SEY+ETV+RR+FT+TGE+PD
Sbjct: 121  LPGCGPGSSSDRTRTSVLNGLRKKLKDSMDSFNRLRELISSEYRETVQRRYFTVTGENPD 180

Query: 581  DKTVEILISTGESESLLQKAIQEQGRGRVIDTISEIQERFDVVKDMEKSLLELHQVFLDM 402
            + T++ LISTGESE  LQKAIQEQGRGRV+DTI+EIQER D VKD+EK+L ELHQVFLDM
Sbjct: 181  EGTLDRLISTGESERFLQKAIQEQGRGRVLDTINEIQERHDAVKDIEKNLKELHQVFLDM 240

Query: 401  AVLVEVQGEQLDDIESQVGRASSFVNRGTEQLTTARRHQKSTRKWTC 261
            AVLVE QG QLDDIES VGRASSF+  GT+QL T R +QK+TRKWTC
Sbjct: 241  AVLVEHQGAQLDDIESHVGRASSFIRGGTDQLQTVRVYQKNTRKWTC 287


>ref|XP_002524068.1| syntaxin, putative [Ricinus communis] gi|223536636|gb|EEF38278.1|
            syntaxin, putative [Ricinus communis]
          Length = 316

 Score =  361 bits (927), Expect = 2e-97
 Identities = 185/282 (65%), Positives = 226/282 (80%)
 Frame = -3

Query: 1106 MNDLFSGSFSRFKSEPNNSPDNYNPKGGVQMSAMGANLDKFFEDVEGIKDXXXXXXXXXX 927
            MNDLFSGSFSRF++E   SPD++  +     S  G NLDKFFEDVE +KD          
Sbjct: 1    MNDLFSGSFSRFRNE-QGSPDHHVIQMTETPSTGGVNLDKFFEDVESVKDELKELERLNE 59

Query: 926  XXXXXXXXLKTIHNAKSIKNLRSQMDSDISXXXXXXXLIKVRLEALDRSNASNRTQPGCG 747
                     KT+HNAK++K+LRS+MD+D++       LIKVRLEALDRSNA+NR+ PGCG
Sbjct: 60   SLQSAHEQSKTLHNAKTVKDLRSRMDADVAQALKKAKLIKVRLEALDRSNAANRSLPGCG 119

Query: 746  PGSSSDRTRTSVLNGLRKKLKDSMEGFNTLRQEIGSEYKETVKRRFFTITGESPDDKTVE 567
            PGSSSDRTRTSV+NGLRKKLKDSME F++LR++I +EY+ETV+RR++T+TGE+PD+KT++
Sbjct: 120  PGSSSDRTRTSVVNGLRKKLKDSMESFSSLREKISTEYRETVQRRYYTVTGENPDEKTLD 179

Query: 566  ILISTGESESLLQKAIQEQGRGRVIDTISEIQERFDVVKDMEKSLLELHQVFLDMAVLVE 387
             LISTGESE+ LQKAIQEQGRGR++DTI+EIQER D VK+MEK+L ELHQVFLDMAVLV+
Sbjct: 180  RLISTGESETFLQKAIQEQGRGRILDTINEIQERHDAVKEMEKNLKELHQVFLDMAVLVQ 239

Query: 386  VQGEQLDDIESQVGRASSFVNRGTEQLTTARRHQKSTRKWTC 261
             QGEQLDDIES + RASSFV  GT+QL TAR  QK+TRKWTC
Sbjct: 240  AQGEQLDDIESNMQRASSFVRGGTQQLQTARTLQKNTRKWTC 281


>ref|XP_003519112.1| PREDICTED: syntaxin-121-like [Glycine max]
          Length = 335

 Score =  358 bits (919), Expect = 2e-96
 Identities = 179/286 (62%), Positives = 225/286 (78%), Gaps = 4/286 (1%)
 Frame = -3

Query: 1106 MNDLFSGSFSRFKSEPNNSPDNYNPKGGVQMSAMG----ANLDKFFEDVEGIKDXXXXXX 939
            MNDLFSGSFSRF+S+ ++   +++ + G   S+ G     NLDKFFEDVEG+K+      
Sbjct: 1    MNDLFSGSFSRFRSDQSSPDRHHDIEMGATASSGGRGGEVNLDKFFEDVEGVKEELKELE 60

Query: 938  XXXXXXXXXXXXLKTIHNAKSIKNLRSQMDSDISXXXXXXXLIKVRLEALDRSNASNRTQ 759
                         KT+HNAK++++LR++MD D+S       LIK++LEAL+RSNA+NR  
Sbjct: 61   GLAQSLRSSHEQSKTLHNAKAVRDLRARMDGDVSAALKKAKLIKLKLEALERSNAANRNM 120

Query: 758  PGCGPGSSSDRTRTSVLNGLRKKLKDSMEGFNTLRQEIGSEYKETVKRRFFTITGESPDD 579
            PGCGPGSSSDRTRTSV+NGL+KKLKD+ME FN +RQ + SEY+ETV+RR+FT+TGE+PDD
Sbjct: 121  PGCGPGSSSDRTRTSVVNGLKKKLKDAMESFNEIRQLVSSEYRETVQRRYFTVTGENPDD 180

Query: 578  KTVEILISTGESESLLQKAIQEQGRGRVIDTISEIQERFDVVKDMEKSLLELHQVFLDMA 399
            KT+++LISTGESE+ LQKAIQEQGRGR++DTI+EIQER D VK++EK+L ELHQVFLDM 
Sbjct: 181  KTLDLLISTGESETFLQKAIQEQGRGRILDTITEIQERHDAVKEIEKNLKELHQVFLDMT 240

Query: 398  VLVEVQGEQLDDIESQVGRASSFVNRGTEQLTTARRHQKSTRKWTC 261
            VLV+ QGEQLDDIES V RA SFV  G EQL TAR+HQK+TRKWTC
Sbjct: 241  VLVQHQGEQLDDIESHVARAHSFVRTGAEQLQTARKHQKNTRKWTC 286


>ref|XP_002884867.1| SYP121 [Arabidopsis lyrata subsp. lyrata] gi|297330707|gb|EFH61126.1|
            SYP121 [Arabidopsis lyrata subsp. lyrata]
          Length = 342

 Score =  358 bits (918), Expect = 2e-96
 Identities = 186/287 (64%), Positives = 220/287 (76%), Gaps = 5/287 (1%)
 Frame = -3

Query: 1106 MNDLFSGSFSRFKSEPNNSPDNYNPKGGVQM-----SAMGANLDKFFEDVEGIKDXXXXX 942
            MNDLFS SFSRF+ EP+   D      G+QM     S  G NLDKFFEDVE +K+     
Sbjct: 1    MNDLFSSSFSRFRGEPSPRRDAPGGGDGLQMANPAGSTGGVNLDKFFEDVESVKEELKEL 60

Query: 941  XXXXXXXXXXXXXLKTIHNAKSIKNLRSQMDSDISXXXXXXXLIKVRLEALDRSNASNRT 762
                          KT+HNAK++K+LRS+MD D+        +IKV+LEALDR+NA+NR+
Sbjct: 61   DRLNETLSSCHEQSKTLHNAKAVKDLRSKMDGDVGVALKKAKMIKVKLEALDRANAANRS 120

Query: 761  QPGCGPGSSSDRTRTSVLNGLRKKLKDSMEGFNTLRQEIGSEYKETVKRRFFTITGESPD 582
             PGCGPGSSSDRTRTSVLNGLRKKLKDSM+ FN LR+ I SEY+ETV+RR+FT+TGE+PD
Sbjct: 121  LPGCGPGSSSDRTRTSVLNGLRKKLKDSMDSFNRLRELISSEYRETVQRRYFTVTGENPD 180

Query: 581  DKTVEILISTGESESLLQKAIQEQGRGRVIDTISEIQERFDVVKDMEKSLLELHQVFLDM 402
            + T++ LISTGESE  LQKAIQEQGRGRV+DTI+EIQER D VKD+EK+L ELHQVFLDM
Sbjct: 181  EGTLDRLISTGESERFLQKAIQEQGRGRVLDTINEIQERHDAVKDIEKNLRELHQVFLDM 240

Query: 401  AVLVEVQGEQLDDIESQVGRASSFVNRGTEQLTTARRHQKSTRKWTC 261
            AVLVE QG QLDDIES VGRASSF+  GT+QL TAR +QK+TRKWTC
Sbjct: 241  AVLVEHQGAQLDDIESHVGRASSFIRGGTDQLHTARVYQKNTRKWTC 287


>ref|XP_002263986.1| PREDICTED: syntaxin-121-like [Vitis vinifera]
          Length = 324

 Score =  357 bits (916), Expect = 4e-96
 Identities = 185/284 (65%), Positives = 222/284 (78%), Gaps = 2/284 (0%)
 Frame = -3

Query: 1106 MNDLFSGSFSRFKSEPNNSPDNYNPKGGVQM--SAMGANLDKFFEDVEGIKDXXXXXXXX 933
            MNDLFSGSFSRF+SE         P   V+M  S  G NLDKFFEDVE IK+        
Sbjct: 1    MNDLFSGSFSRFRSE--------EPPPSVEMTSSTAGVNLDKFFEDVESIKEELREMESL 52

Query: 932  XXXXXXXXXXLKTIHNAKSIKNLRSQMDSDISXXXXXXXLIKVRLEALDRSNASNRTQPG 753
                       KT+HNA S+K LRS+MDS +S       LIK+RLEALDRSNA+NR+ PG
Sbjct: 53   QQKLHDAHEQSKTLHNANSVKELRSRMDSHVSLALKKAKLIKLRLEALDRSNAANRSLPG 112

Query: 752  CGPGSSSDRTRTSVLNGLRKKLKDSMEGFNTLRQEIGSEYKETVKRRFFTITGESPDDKT 573
            CGPGSSSDRTRTSV+NGLRKKL+DSM+ F ++R +I SEY+ETV+RR+FT+TGE+PD+KT
Sbjct: 113  CGPGSSSDRTRTSVVNGLRKKLRDSMDAFTSIRNQISSEYRETVQRRYFTVTGENPDEKT 172

Query: 572  VEILISTGESESLLQKAIQEQGRGRVIDTISEIQERFDVVKDMEKSLLELHQVFLDMAVL 393
            V++LISTGESE+ LQKAIQEQGRGRV+DTISEI+ER + VK++E++L ELHQVFLDMAVL
Sbjct: 173  VDLLISTGESETFLQKAIQEQGRGRVLDTISEIRERHESVKELERNLKELHQVFLDMAVL 232

Query: 392  VEVQGEQLDDIESQVGRASSFVNRGTEQLTTARRHQKSTRKWTC 261
            V+ QGEQLDDIESQV RA+SFV  GT+QL TAR+HQ S+RKWTC
Sbjct: 233  VQAQGEQLDDIESQVARANSFVTGGTQQLQTARKHQISSRKWTC 276


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